RNA–Protein interactions for RNA: ENST00000465756.5

NPHP3-203, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 3,852 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-203ENST00000465756 BRIP1Q9BX63 1249 aa13.78□□□□□ -0.2
NPHP3-203ENST00000465756 MBIPQ9NS73 344 aa13.78□□□□□ -0.2
NPHP3-203ENST00000465756 SALL2Q9Y467 1007 aaPredicted RBP13.78□□□□□ -0.2
NPHP3-203ENST00000465756 C2CD5Q86YS7 1000 aa13.77□□□□□ -0.2
NPHP3-203ENST00000465756 TJP1Q07157 1748 aa13.77□□□□□ -0.2
NPHP3-203ENST00000465756 UBR2Q8IWV8 1755 aa13.77□□□□□ -0.21
NPHP3-203ENST00000465756 TWISTNBQ3B726 338 aaPredicted RBP13.77□□□□□ -0.21
NPHP3-203ENST00000465756 PDGFDQ9GZP0 370 aaPredicted RBP13.77□□□□□ -0.21
NPHP3-203ENST00000465756 BCS1LQ9Y276 419 aa13.77□□□□□ -0.21
NPHP3-203ENST00000465756 RPGRQ92834 1020 aaKnown RBP13.76□□□□□ -0.21
NPHP3-203ENST00000465756 IBTKQ9P2D0 1353 aaPredicted RBP13.76□□□□□ -0.21
NPHP3-203ENST00000465756 SIPA1L3O60292 1781 aaPredicted RBP13.76□□□□□ -0.21
NPHP3-203ENST00000465756 CAMTA2O94983 1202 aa13.76□□□□□ -0.21
NPHP3-203ENST00000465756 ALDH1B1P30837 517 aa13.76□□□□□ -0.21
NPHP3-203ENST00000465756 CC2D2BQ6DHV5 1058 aa13.76□□□□□ -0.21
NPHP3-203ENST00000465756 UTP14AQ9BVJ6 771 aaKnown RBP13.76□□□□□ -0.21
NPHP3-203ENST00000465756 DLG5Q8TDM6 1919 aa13.76□□□□□ -0.21
NPHP3-203ENST00000465756 CT47B1P0C2W7 299 aaPredicted RBP13.76□□□□□ -0.21
NPHP3-203ENST00000465756 AIMP1Q12904 312 aaKnown RBP13.76□□□□□ -0.21
NPHP3-203ENST00000465756 PLBD2Q8NHP8 589 aa13.76□□□□□ -0.21
NPHP3-203ENST00000465756 GIGYF2Q6Y7W6 1299 aaKnown RBP13.75□□□□□ -0.21
NPHP3-203ENST00000465756 ZNF622Q969S3 477 aaKnown RBP eCLIP13.75□□□□□ -0.21
NPHP3-203ENST00000465756 TM4SF1P30408 202 aa13.75□□□□□ -0.21
NPHP3-203ENST00000465756 TTLL6Q8N841 843 aa13.75□□□□□ -0.21
NPHP3-203ENST00000465756 ZBTB3Q9H5J0 574 aa13.75□□□□□ -0.21
NPHP3-203ENST00000465756 POLRMTO00411 1230 aaKnown RBP13.74□□□□□ -0.21
NPHP3-203ENST00000465756 ZNF853P0CG23 659 aa13.74□□□□□ -0.21
NPHP3-203ENST00000465756 ANKRD13DQ6ZTN6 518 aa13.74□□□□□ -0.21
NPHP3-203ENST00000465756 XAGE3Q8WTP9 111 aa13.74□□□□□ -0.21
NPHP3-203ENST00000465756 NLRP3Q96P20 1036 aa13.74□□□□□ -0.21
NPHP3-203ENST00000465756 LAMB4A4D0S4 1761 aa13.74□□□□□ -0.21
NPHP3-203ENST00000465756 COPS6Q7L5N1 327 aa13.74□□□□□ -0.21
NPHP3-203ENST00000465756 NECTIN2Q92692 538 aa13.74□□□□□ -0.21
NPHP3-203ENST00000465756 C10orf71Q711Q0 1435 aa13.74□□□□□ -0.21
NPHP3-203ENST00000465756 YY1P25490 414 aa13.73□□□□□ -0.21
NPHP3-203ENST00000465756 STYK1Q6J9G0 422 aa13.73□□□□□ -0.21
NPHP3-203ENST00000465756 RBM17Q96I25 401 aaKnown RBP13.73□□□□□ -0.21
NPHP3-203ENST00000465756 KDM3BQ7LBC6 1761 aa13.73□□□□□ -0.21
NPHP3-203ENST00000465756 C4AP0C0L4 1744 aa13.73□□□□□ -0.21
NPHP3-203ENST00000465756 NPR1P16066 1061 aa13.73□□□□□ -0.21
NPHP3-203ENST00000465756 TMC4Q7Z404 712 aa13.73□□□□□ -0.21
NPHP3-203ENST00000465756 MASTLQ96GX5 879 aa13.73□□□□□ -0.21
NPHP3-203ENST00000465756 TBC1D9BQ66K14 1250 aa13.72□□□□□ -0.21
NPHP3-203ENST00000465756 CHPF2Q9P2E5 772 aa13.72□□□□□ -0.21
NPHP3-203ENST00000465756 ATP10DQ9P241 1426 aa13.72□□□□□ -0.21
NPHP3-203ENST00000465756 TUBGCP6Q96RT7 1819 aa13.71□□□□□ -0.21
NPHP3-203ENST00000465756 ELL2O00472 640 aaPredicted RBP13.71□□□□□ -0.21
NPHP3-203ENST00000465756 TCIRG1Q13488 830 aa13.71□□□□□ -0.21
NPHP3-203ENST00000465756 ARHGAP27Q6ZUM4 889 aa13.71□□□□□ -0.21
NPHP3-203ENST00000465756 TRMT112Q9UI30 125 aaKnown RBP13.71□□□□□ -0.21
NPHP3-203ENST00000465756 DPEP1P16444 411 aa13.71□□□□□ -0.21
NPHP3-203ENST00000465756 SH3TC1Q8TE82 1336 aa13.71□□□□□ -0.21
NPHP3-203ENST00000465756 FAM177BA6PVY3 158 aa13.71□□□□□ -0.22
NPHP3-203ENST00000465756 NBPF26B4DH59 902 aa13.71□□□□□ -0.22
NPHP3-203ENST00000465756 NBPF10Q6P3W6 841 aaKnown RBP13.71□□□□□ -0.22
NPHP3-203ENST00000465756 NBPF15Q8N660 670 aa13.71□□□□□ -0.22
NPHP3-203ENST00000465756 DDR1Q08345 913 aa13.7□□□□□ -0.22
NPHP3-203ENST00000465756 SUPT20HQ8NEM7 779 aa13.7□□□□□ -0.22
NPHP3-203ENST00000465756 GPTP24298 496 aa13.69□□□□□ -0.22
NPHP3-203ENST00000465756 FKBP5Q13451 457 aaPredicted RBP13.69□□□□□ -0.22
NPHP3-203ENST00000465756 PRR5LQ6MZQ0 368 aa13.69□□□□□ -0.22
NPHP3-203ENST00000465756 DDX46Q7L014 1031 aaKnown RBP13.69□□□□□ -0.22
NPHP3-203ENST00000465756 FANCIQ9NVI1 1328 aa13.69□□□□□ -0.22
NPHP3-203ENST00000465756 CCDC184Q52MB2 194 aa13.69□□□□□ -0.22
NPHP3-203ENST00000465756 CWC25Q9NXE8 425 aaPredicted RBP13.69□□□□□ -0.22
NPHP3-203ENST00000465756 PIP4K2AP48426 406 aaPredicted RBP13.68□□□□□ -0.22
NPHP3-203ENST00000465756 MYH14Q7Z406 1995 aaKnown RBP13.68□□□□□ -0.22
NPHP3-203ENST00000465756 IPO8O15397 1037 aaKnown RBP13.68□□□□□ -0.22
NPHP3-203ENST00000465756 CCDC93Q567U6 631 aa13.68□□□□□ -0.22
NPHP3-203ENST00000465756 KSR2Q6VAB6 950 aa13.68□□□□□ -0.22
NPHP3-203ENST00000465756 TTLL7Q6ZT98 887 aa13.68□□□□□ -0.22
NPHP3-203ENST00000465756 SMIM5Q71RC9 77 aa13.68□□□□□ -0.22
NPHP3-203ENST00000465756 RTKN2Q8IZC4 609 aa13.68□□□□□ -0.22
NPHP3-203ENST00000465756 CCDC191Q8NCU4 936 aa13.68□□□□□ -0.22
NPHP3-203ENST00000465756 PXDNLA1KZ92 1463 aa13.68□□□□□ -0.22
NPHP3-203ENST00000465756 PRAMEF22A3QJZ6 481 aa13.67□□□□□ -0.22
NPHP3-203ENST00000465756 HNRNPUQ00839 825 aaKnown RBP eCLIP13.67□□□□□ -0.22
NPHP3-203ENST00000465756 EXOSC9Q06265 439 aaKnown RBP13.67□□□□□ -0.22
NPHP3-203ENST00000465756 A0A0G2JLW4 131 aa13.67□□□□□ -0.22
NPHP3-203ENST00000465756 NLGN2Q8NFZ4 835 aa13.67□□□□□ -0.22
NPHP3-203ENST00000465756 TSR2Q969E8 191 aaKnown RBP13.67□□□□□ -0.22
NPHP3-203ENST00000465756 SLC4A2P04920 1241 aa13.67□□□□□ -0.22
NPHP3-203ENST00000465756 BCL2L12Q9HB09 334 aa13.67□□□□□ -0.22
NPHP3-203ENST00000465756 COL24A1Q17RW2 1714 aa13.67□□□□□ -0.22
NPHP3-203ENST00000465756 SCN7AQ01118 1682 aa13.67□□□□□ -0.22
NPHP3-203ENST00000465756 MS4A1P11836 297 aa13.66□□□□□ -0.22
NPHP3-203ENST00000465756 ZC3H4Q9UPT8 1303 aaKnown RBP13.66□□□□□ -0.22
NPHP3-203ENST00000465756 TRIM28Q13263 835 aaKnown RBP13.66□□□□□ -0.22
NPHP3-203ENST00000465756 ZNF34Q8IZ26 560 aa13.66□□□□□ -0.22
NPHP3-203ENST00000465756 RIC1Q4ADV7 1423 aa13.66□□□□□ -0.22
NPHP3-203ENST00000465756 C16orf71Q8IYS4 520 aaPredicted RBP13.65□□□□□ -0.22
NPHP3-203ENST00000465756 METTL22Q9BUU2 404 aaPredicted RBP13.65□□□□□ -0.22
NPHP3-203ENST00000465756 API5Q9BZZ5 524 aaKnown RBP13.65□□□□□ -0.22
NPHP3-203ENST00000465756 C8orf58Q8NAV2 365 aa13.65□□□□□ -0.22
NPHP3-203ENST00000465756 MYD88Q99836 296 aa13.65□□□□□ -0.22
NPHP3-203ENST00000465756 KDM2BQ8NHM5 1336 aa13.65□□□□□ -0.22
NPHP3-203ENST00000465756 CCDC152Q4G0S7 254 aa13.65□□□□□ -0.23
NPHP3-203ENST00000465756 DPY19L2Q6NUT2 758 aa13.65□□□□□ -0.23
NPHP3-203ENST00000465756 AMIGO3Q86WK7 504 aa13.65□□□□□ -0.23
NPHP3-203ENST00000465756 CRAMP1Q96RY5 1269 aa13.65□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms