RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 RIMBP3BA6NNM3 1639 aa15.01□□□□□ -0.01
CLCNKA-204ENST00000464764 AOX1Q06278 1338 aa15.01□□□□□ -0.01
CLCNKA-204ENST00000464764 TYRO3Q06418 890 aa15.01□□□□□ -0.01
CLCNKA-204ENST00000464764 POLA2Q14181 598 aa15.01□□□□□ -0.01
CLCNKA-204ENST00000464764 KIF1BPQ96EK5 621 aa15.01□□□□□ -0.01
CLCNKA-204ENST00000464764 RIMBP3Q9UFD9 1639 aa15.01□□□□□ -0.01
CLCNKA-204ENST00000464764 TAF7Q15545 349 aaPredicted RBP15.01□□□□□ -0.01
CLCNKA-204ENST00000464764 DACT1Q9NYF0 836 aa15.01□□□□□ -0.01
CLCNKA-204ENST00000464764 TAF6LQ9Y6J9 622 aa15.01□□□□□ -0.01
CLCNKA-204ENST00000464764 PEAK1Q9H792 1746 aa15.01□□□□□ -0.01
CLCNKA-204ENST00000464764 ROBO2Q9HCK4 1378 aa15.01□□□□□ -0.01
CLCNKA-204ENST00000464764 ANO6Q4KMQ2 910 aa15.01□□□□□ -0.01
CLCNKA-204ENST00000464764 ANKRD7Q92527 254 aa15.01□□□□□ -0.01
CLCNKA-204ENST00000464764 PA2G4Q9UQ80 394 aaKnown RBP15.01□□□□□ -0.01
CLCNKA-204ENST00000464764 NEO1Q92859 1461 aa15□□□□□ -0.01
CLCNKA-204ENST00000464764 GNAT3A8MTJ3 354 aa15□□□□□ -0.01
CLCNKA-204ENST00000464764 RAB11FIP3O75154 756 aa15□□□□□ -0.01
CLCNKA-204ENST00000464764 USHBP1Q8N6Y0 703 aa15□□□□□ -0.01
CLCNKA-204ENST00000464764 FAM200AQ8TCP9 573 aa15□□□□□ -0.01
CLCNKA-204ENST00000464764 CBX8Q9HC52 389 aa15□□□□□ -0.01
CLCNKA-204ENST00000464764 CYP46A1Q9Y6A2 500 aa15□□□□□ -0.01
CLCNKA-204ENST00000464764 MAP3K11Q16584 847 aa15□□□□□ -0.01
CLCNKA-204ENST00000464764 NUP62CLQ9H1M0 184 aa15□□□□□ -0.01
CLCNKA-204ENST00000464764 OVOS2A0A0J9YW53 1432 aa15□□□□□ -0.01
CLCNKA-204ENST00000464764 OVOS2Q6IE36 1432 aa15□□□□□ -0.01
CLCNKA-204ENST00000464764 NCBP1Q09161 790 aaKnown RBP14.99□□□□□ -0.01
CLCNKA-204ENST00000464764 STK3Q13188 491 aa14.99□□□□□ -0.01
CLCNKA-204ENST00000464764 FAM227BQ96M60 508 aa14.99□□□□□ -0.01
CLCNKA-204ENST00000464764 ZSWIM6Q9HCJ5 1215 aa14.99□□□□□ -0.01
CLCNKA-204ENST00000464764 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.99□□□□□ -0.01
CLCNKA-204ENST00000464764 PI4KAP2A4QPH2 592 aa14.99□□□□□ -0.01
CLCNKA-204ENST00000464764 CTIFO43310 598 aaKnown RBP14.99□□□□□ -0.01
CLCNKA-204ENST00000464764 VPS53Q5VIR6 699 aa14.99□□□□□ -0.01
CLCNKA-204ENST00000464764 PI4KAP1Q8N8J0 262 aa14.99□□□□□ -0.01
CLCNKA-204ENST00000464764 TRIM5Q9C035 493 aa14.99□□□□□ -0.01
CLCNKA-204ENST00000464764 C3P01024 1663 aa14.99□□□□□ -0.01
CLCNKA-204ENST00000464764 CEP170BQ9Y4F5 1589 aaPredicted RBP14.98□□□□□ -0.01
CLCNKA-204ENST00000464764 GOLGA6L6A8MZA4 724 aa14.98□□□□□ -0.01
CLCNKA-204ENST00000464764 KCNJ4P48050 445 aa14.98□□□□□ -0.01
CLCNKA-204ENST00000464764 NRKQ7Z2Y5 1582 aa14.98□□□□□ -0.01
CLCNKA-204ENST00000464764 EPB41L2O43491 1005 aaKnown RBP14.98□□□□□ -0.01
CLCNKA-204ENST00000464764 TNMDQ9H2S6 317 aa14.98□□□□□ -0.01
CLCNKA-204ENST00000464764 KCNQ3O43525 872 aa14.97□□□□□ -0.01
CLCNKA-204ENST00000464764 KRT85P78386 507 aa14.97□□□□□ -0.01
CLCNKA-204ENST00000464764 ARID5BQ14865 1188 aa14.97□□□□□ -0.01
CLCNKA-204ENST00000464764 RBM8AQ9Y5S9 174 aaKnown RBP14.97□□□□□ -0.01
CLCNKA-204ENST00000464764 ARHGEF10O15013 1369 aa14.97□□□□□ -0.01
CLCNKA-204ENST00000464764 A0A087WWV3 80 aa14.97□□□□□ -0.01
CLCNKA-204ENST00000464764 ZNF592Q92610 1267 aa14.97□□□□□ -0.01
CLCNKA-204ENST00000464764 GTPBP4Q9BZE4 634 aaKnown RBP14.97□□□□□ -0.01
CLCNKA-204ENST00000464764 DNAJC25Q9H1X3 360 aa14.97□□□□□ -0.01
CLCNKA-204ENST00000464764 CHPF2Q9P2E5 772 aa14.97□□□□□ -0.01
CLCNKA-204ENST00000464764 MON2Q7Z3U7 1717 aa14.97□□□□□ -0.01
CLCNKA-204ENST00000464764 NR1I2O75469 434 aa14.96□□□□□ -0.01
CLCNKA-204ENST00000464764 TNNT1P13805 278 aa14.96□□□□□ -0.01
CLCNKA-204ENST00000464764 NECTIN1Q15223 517 aa14.96□□□□□ -0.01
CLCNKA-204ENST00000464764 CCDC144BQ3MJ40 725 aa14.96□□□□□ -0.01
CLCNKA-204ENST00000464764 LARP1Q6PKG0 1096 aaKnown RBP14.96□□□□□ -0.01
CLCNKA-204ENST00000464764 CCDC144CPQ8IYA2 1237 aa14.96□□□□□ -0.01
CLCNKA-204ENST00000464764 DDX11Q96FC9 970 aa14.96□□□□□ -0.01
CLCNKA-204ENST00000464764 GLRX3O76003 335 aaKnown RBP14.96□□□□□ -0.01
CLCNKA-204ENST00000464764 CREB3L3Q68CJ9 461 aa14.96□□□□□ -0.01
CLCNKA-204ENST00000464764 ZSCAN25Q6NSZ9 544 aa14.96□□□□□ -0.01
CLCNKA-204ENST00000464764 CACTINQ8WUQ7 758 aaKnown RBP14.96□□□□□ -0.01
CLCNKA-204ENST00000464764 IGSF1Q8N6C5 1336 aa14.96□□□□□ -0.01
CLCNKA-204ENST00000464764 PLEKHG3A1L390 1219 aa14.95□□□□□ -0.02
CLCNKA-204ENST00000464764 GOLGA6L4A6NEF3 574 aa14.95□□□□□ -0.02
CLCNKA-204ENST00000464764 BEND3Q5T5X7 828 aa14.95□□□□□ -0.02
CLCNKA-204ENST00000464764 SH2B1Q9NRF2 756 aaPredicted RBP14.95□□□□□ -0.02
CLCNKA-204ENST00000464764 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.95□□□□□ -0.02
CLCNKA-204ENST00000464764 V9GYY5 206 aaPredicted RBP14.95□□□□□ -0.02
CLCNKA-204ENST00000464764 USP6P35125 1406 aa14.95□□□□□ -0.02
CLCNKA-204ENST00000464764 SETD1AO15047 1707 aaKnown RBP14.95□□□□□ -0.02
CLCNKA-204ENST00000464764 TPM3P06753 285 aa14.95□□□□□ -0.02
CLCNKA-204ENST00000464764 ZNF75DP51815 510 aa14.95□□□□□ -0.02
CLCNKA-204ENST00000464764 SPATA32Q96LK8 384 aa14.95□□□□□ -0.02
CLCNKA-204ENST00000464764 ZSCAN31Q96LW9 406 aaPredicted RBP14.95□□□□□ -0.02
CLCNKA-204ENST00000464764 CEBPZQ03701 1054 aaKnown RBP14.94□□□□□ -0.02
CLCNKA-204ENST00000464764 LGR6Q9HBX8 967 aa14.94□□□□□ -0.02
CLCNKA-204ENST00000464764 KDRP35968 1356 aa14.94□□□□□ -0.02
CLCNKA-204ENST00000464764 USP31Q70CQ4 1352 aa14.94□□□□□ -0.02
CLCNKA-204ENST00000464764 NMIQ13287 307 aaPredicted RBP14.94□□□□□ -0.02
CLCNKA-204ENST00000464764 CLASRPQ8N2M8 674 aaKnown RBP14.94□□□□□ -0.02
CLCNKA-204ENST00000464764 PGBD1Q96JS3 809 aa14.94□□□□□ -0.02
CLCNKA-204ENST00000464764 SLC26A8Q96RN1 970 aa14.94□□□□□ -0.02
CLCNKA-204ENST00000464764 CCDC8Q9H0W5 538 aaPredicted RBP14.94□□□□□ -0.02
CLCNKA-204ENST00000464764 CCDC171Q6TFL3 1326 aa14.94□□□□□ -0.02
CLCNKA-204ENST00000464764 RICTORQ6R327 1708 aa14.94□□□□□ -0.02
CLCNKA-204ENST00000464764 XRN1Q8IZH2 1706 aaKnown RBP14.94□□□□□ -0.02
CLCNKA-204ENST00000464764 USP27XA6NNY8 438 aa14.94□□□□□ -0.02
CLCNKA-204ENST00000464764 ZKSCAN1P17029 563 aaPredicted RBP14.94□□□□□ -0.02
CLCNKA-204ENST00000464764 NGDNQ8NEJ9 315 aaKnown RBP14.94□□□□□ -0.02
CLCNKA-204ENST00000464764 DNAAF4Q8WXU2 420 aa14.94□□□□□ -0.02
CLCNKA-204ENST00000464764 ECHDC1Q9NTX5 307 aa14.94□□□□□ -0.02
CLCNKA-204ENST00000464764 FLT4P35916 1363 aa14.93□□□□□ -0.02
CLCNKA-204ENST00000464764 JAK2O60674 1132 aa14.93□□□□□ -0.02
CLCNKA-204ENST00000464764 ZNF165P49910 485 aa14.93□□□□□ -0.02
CLCNKA-204ENST00000464764 TPD52L1Q16890 204 aaPredicted RBP14.93□□□□□ -0.02
CLCNKA-204ENST00000464764 AACSQ86V21 672 aa14.93□□□□□ -0.02
CLCNKA-204ENST00000464764 LEO1Q8WVC0 666 aaPredicted RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms