RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 IBTKQ9P2D0 1353 aaPredicted RBP23.77■■□□□ 1.4
CCDC78-206ENST00000463539 IGKV5-2P06315 115 aa23.77■■□□□ 1.4
CCDC78-206ENST00000463539 NBPF7P0C2Y1 421 aaPredicted RBP23.77■■□□□ 1.4
CCDC78-206ENST00000463539 ILDR1Q86SU0 546 aaPredicted RBP23.76■■□□□ 1.39
CCDC78-206ENST00000463539 NEURL1BA8MQ27 555 aa23.75■■□□□ 1.39
CCDC78-206ENST00000463539 ZBTB1Q9Y2K1 713 aa23.75■■□□□ 1.39
CCDC78-206ENST00000463539 GRM8O00222 908 aa23.74■■□□□ 1.39
CCDC78-206ENST00000463539 HDAC5Q9UQL6 1122 aa23.74■■□□□ 1.39
CCDC78-206ENST00000463539 NHSQ6T4R5 1651 aa23.74■■□□□ 1.39
CCDC78-206ENST00000463539 KIF6Q6ZMV9 814 aa23.73■■□□□ 1.39
CCDC78-206ENST00000463539 PTF1AQ7RTS3 328 aa23.73■■□□□ 1.39
CCDC78-206ENST00000463539 ZBTB3Q9H5J0 574 aa23.73■■□□□ 1.39
CCDC78-206ENST00000463539 RBM6P78332 1123 aaKnown RBP23.73■■□□□ 1.39
CCDC78-206ENST00000463539 NUCB1Q02818 461 aa23.73■■□□□ 1.39
CCDC78-206ENST00000463539 GCKRQ14397 625 aa23.73■■□□□ 1.39
CCDC78-206ENST00000463539 DCTPP1Q9H773 170 aa23.73■■□□□ 1.39
CCDC78-206ENST00000463539 ARFGEF2Q9Y6D5 1785 aa23.72■■□□□ 1.39
CCDC78-206ENST00000463539 CICQ96RK0 1608 aaPredicted RBP23.72■■□□□ 1.39
CCDC78-206ENST00000463539 ITPK1Q13572 414 aa23.72■■□□□ 1.39
CCDC78-206ENST00000463539 UTYO14607 1347 aa23.72■■□□□ 1.39
CCDC78-206ENST00000463539 IL6STP40189 918 aaPredicted RBP23.71■■□□□ 1.39
CCDC78-206ENST00000463539 ATP8B2P98198 1209 aa23.71■■□□□ 1.39
CCDC78-206ENST00000463539 TSHZ2Q9NRE2 1034 aa23.71■■□□□ 1.39
CCDC78-206ENST00000463539 CCDC87Q9NVE4 849 aa23.71■■□□□ 1.39
CCDC78-206ENST00000463539 NPM2Q86SE8 214 aaKnown RBP23.7■■□□□ 1.39
CCDC78-206ENST00000463539 ATP5J2-PTCD1G3V325 749 aa23.7■■□□□ 1.38
CCDC78-206ENST00000463539 CRKLP46109 303 aaKnown RBP23.7■■□□□ 1.38
CCDC78-206ENST00000463539 KRT27Q7Z3Y8 459 aa23.7■■□□□ 1.38
CCDC78-206ENST00000463539 CHD1LQ86WJ1 897 aa23.7■■□□□ 1.38
CCDC78-206ENST00000463539 ANKRD45Q5TZF3 282 aa23.69■■□□□ 1.38
CCDC78-206ENST00000463539 NUP188Q5SRE5 1749 aa23.69■■□□□ 1.38
CCDC78-206ENST00000463539 PNMA6EA0A0J9YXQ4 647 aa23.68■■□□□ 1.38
CCDC78-206ENST00000463539 INTS5Q6P9B9 1019 aaKnown RBP23.68■■□□□ 1.38
CCDC78-206ENST00000463539 ARXQ96QS3 562 aa23.68■■□□□ 1.38
CCDC78-206ENST00000463539 MAP3K15Q6ZN16 1313 aa23.67■■□□□ 1.38
CCDC78-206ENST00000463539 PPP1R42Q7Z4L9 355 aa23.67■■□□□ 1.38
CCDC78-206ENST00000463539 LNPKQ9C0E8 428 aa23.67■■□□□ 1.38
CCDC78-206ENST00000463539 ZNF831Q5JPB2 1677 aa23.66■■□□□ 1.38
CCDC78-206ENST00000463539 FAM196AQ6ZSG2 479 aa23.66■■□□□ 1.38
CCDC78-206ENST00000463539 BTAF1O14981 1849 aa23.66■■□□□ 1.38
CCDC78-206ENST00000463539 SSH3Q8TE77 659 aa23.66■■□□□ 1.38
CCDC78-206ENST00000463539 BCL11BQ9C0K0 894 aaPredicted RBP23.66■■□□□ 1.38
CCDC78-206ENST00000463539 CWC25Q9NXE8 425 aaPredicted RBP23.66■■□□□ 1.38
CCDC78-206ENST00000463539 SRGAP3O43295 1099 aa23.65■■□□□ 1.38
CCDC78-206ENST00000463539 PDE4AP27815 886 aa23.65■■□□□ 1.38
CCDC78-206ENST00000463539 EIF5P55010 431 aaKnown RBP23.65■■□□□ 1.38
CCDC78-206ENST00000463539 SUCLG2Q96I99 432 aa23.65■■□□□ 1.38
CCDC78-206ENST00000463539 ZBTB47Q9UFB7 747 aaPredicted RBP23.65■■□□□ 1.38
CCDC78-206ENST00000463539 A0A087WZG4 1122 aa23.64■■□□□ 1.38
CCDC78-206ENST00000463539 TCIRG1Q13488 830 aa23.64■■□□□ 1.38
CCDC78-206ENST00000463539 MTX1Q13505 466 aa23.64■■□□□ 1.38
CCDC78-206ENST00000463539 CCDC191Q8NCU4 936 aa23.64■■□□□ 1.38
CCDC78-206ENST00000463539 POLA2Q14181 598 aa23.63■■□□□ 1.37
CCDC78-206ENST00000463539 DZIP3Q86Y13 1208 aaKnown RBP23.63■■□□□ 1.37
CCDC78-206ENST00000463539 LINC00116Q8NCU8 138 aa23.63■■□□□ 1.37
CCDC78-206ENST00000463539 RREB1Q92766 1687 aa23.63■■□□□ 1.37
CCDC78-206ENST00000463539 GIGYF2Q6Y7W6 1299 aaKnown RBP23.63■■□□□ 1.37
CCDC78-206ENST00000463539 UBE3BQ7Z3V4 1068 aa23.63■■□□□ 1.37
CCDC78-206ENST00000463539 RXRBP28702 533 aa23.62■■□□□ 1.37
CCDC78-206ENST00000463539 KAZALD1Q96I82 304 aa23.62■■□□□ 1.37
CCDC78-206ENST00000463539 ISCA1Q9BUE6 129 aa23.62■■□□□ 1.37
CCDC78-206ENST00000463539 BICC1Q9H694 974 aaKnown RBP23.62■■□□□ 1.37
CCDC78-206ENST00000463539 CCNL1Q9UK58 526 aaPredicted RBP23.62■■□□□ 1.37
CCDC78-206ENST00000463539 ERVV-1B6SEH8 477 aa23.61■■□□□ 1.37
CCDC78-206ENST00000463539 HSP90AB3PQ58FF7 597 aa23.61■■□□□ 1.37
CCDC78-206ENST00000463539 TBC1D2BQ9UPU7 963 aa23.61■■□□□ 1.37
CCDC78-206ENST00000463539 EXOC6BQ9Y2D4 811 aa23.61■■□□□ 1.37
CCDC78-206ENST00000463539 CNTNAP4Q9C0A0 1308 aa23.61■■□□□ 1.37
CCDC78-206ENST00000463539 APBB1O00213 710 aa23.61■■□□□ 1.37
CCDC78-206ENST00000463539 KCNQ4P56696 695 aa23.61■■□□□ 1.37
CCDC78-206ENST00000463539 TRIM28Q13263 835 aaKnown RBP23.61■■□□□ 1.37
CCDC78-206ENST00000463539 COL5A3P25940 1745 aaPredicted RBP23.6■■□□□ 1.37
CCDC78-206ENST00000463539 COL15A1P39059 1388 aa23.6■■□□□ 1.37
CCDC78-206ENST00000463539 HLFQ16534 295 aa23.6■■□□□ 1.37
CCDC78-206ENST00000463539 AFDNP55196 1824 aaKnown RBP23.6■■□□□ 1.37
CCDC78-206ENST00000463539 SBF2Q86WG5 1849 aa23.6■■□□□ 1.37
CCDC78-206ENST00000463539 H7C1W4 665 aa23.59■■□□□ 1.37
CCDC78-206ENST00000463539 JARID2Q92833 1246 aaPredicted RBP23.59■■□□□ 1.37
CCDC78-206ENST00000463539 BRWD3Q6RI45 1802 aa23.59■■□□□ 1.37
CCDC78-206ENST00000463539 CASP7P55210 303 aa23.59■■□□□ 1.37
CCDC78-206ENST00000463539 SURF6O75683 361 aaKnown RBP23.56■■□□□ 1.36
CCDC78-206ENST00000463539 LRRCC1Q9C099 1032 aa23.56■■□□□ 1.36
CCDC78-206ENST00000463539 TRIM37O94972 964 aa23.56■■□□□ 1.36
CCDC78-206ENST00000463539 FAM161AQ3B820 660 aa23.56■■□□□ 1.36
CCDC78-206ENST00000463539 EPHA10Q5JZY3 1008 aa23.56■■□□□ 1.36
CCDC78-206ENST00000463539 RC3H1Q5TC82 1133 aaKnown RBP23.56■■□□□ 1.36
CCDC78-206ENST00000463539 SMARCA5O60264 1052 aaPredicted RBP23.55■■□□□ 1.36
CCDC78-206ENST00000463539 GPTP24298 496 aa23.55■■□□□ 1.36
CCDC78-206ENST00000463539 BCL11AQ9H165 835 aa23.55■■□□□ 1.36
CCDC78-206ENST00000463539 RGS17Q9UGC6 210 aaPredicted RBP23.55■■□□□ 1.36
CCDC78-206ENST00000463539 RAB11FIP3O75154 756 aa23.54■■□□□ 1.36
CCDC78-206ENST00000463539 RABL6Q3YEC7 729 aaPredicted RBP23.54■■□□□ 1.36
CCDC78-206ENST00000463539 HSP90AB4PQ58FF6 505 aa23.54■■□□□ 1.36
CCDC78-206ENST00000463539 RTL5Q5HYW3 569 aaPredicted RBP23.54■■□□□ 1.36
CCDC78-206ENST00000463539 BACH2Q9BYV9 841 aa23.54■■□□□ 1.36
CCDC78-206ENST00000463539 MYH14Q7Z406 1995 aaKnown RBP23.54■■□□□ 1.36
CCDC78-206ENST00000463539 CAMTA2O94983 1202 aa23.54■■□□□ 1.36
CCDC78-206ENST00000463539 NLRP10Q86W26 655 aa23.54■■□□□ 1.36
CCDC78-206ENST00000463539 LY75O60449 1722 aa23.54■■□□□ 1.36
CCDC78-206ENST00000463539 NOP58Q9Y2X3 529 aaKnown RBP23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms