RNA–Protein interactions for RNA: ENST00000462927.5

CYTH4-208, Transcript of cytohesin 4, human

TSL 2

Gene CYTH4, Length 3,667 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CYTH4-208	ENST00000462927	PROSER3	Q2NL68	480 aa		12.02	□□□□□ -0.49
CYTH4-208	ENST00000462927	HYPK	Q9NX55	129 aa		12.02	□□□□□ -0.49
CYTH4-208	ENST00000462927	HEG1	Q9ULI3	1381 aa		12.02	□□□□□ -0.49
CYTH4-208	ENST00000462927	PI4KAP2	A4QPH2	592 aa		12.01	□□□□□ -0.49
CYTH4-208	ENST00000462927	PI4KAP1	Q8N8J0	262 aa		12.01	□□□□□ -0.49
CYTH4-208	ENST00000462927	CHMP4B	Q9H444	224 aa	Known RBP	12.01	□□□□□ -0.49
CYTH4-208	ENST00000462927	SCN11A	Q9UI33	1791 aa		12.01	□□□□□ -0.49
CYTH4-208	ENST00000462927	ARHGAP45	Q92619	1136 aa		12.01	□□□□□ -0.49
CYTH4-208	ENST00000462927	SMARCC1	Q92922	1105 aa	Predicted RBP	12.01	□□□□□ -0.49
CYTH4-208	ENST00000462927	DDX21	Q9NR30	783 aa	Known RBP eCLIP	12.01	□□□□□ -0.49
CYTH4-208	ENST00000462927	PTMS	P20962	102 aa		12.01	□□□□□ -0.49
CYTH4-208	ENST00000462927	MSN	P26038	577 aa	Known RBP	12.01	□□□□□ -0.49
CYTH4-208	ENST00000462927	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	12.01	□□□□□ -0.49
CYTH4-208	ENST00000462927	FOXD4L3	Q6VB84	417 aa	Predicted RBP	12.01	□□□□□ -0.49
CYTH4-208	ENST00000462927	KIAA1211	Q6ZU35	1233 aa		12.01	□□□□□ -0.49
CYTH4-208	ENST00000462927	COPS6	Q7L5N1	327 aa		12.01	□□□□□ -0.49
CYTH4-208	ENST00000462927	XAGE3	Q8WTP9	111 aa		12.01	□□□□□ -0.49
CYTH4-208	ENST00000462927	TEX13A	Q9BXU3	409 aa	Predicted RBP	12.01	□□□□□ -0.49
CYTH4-208	ENST00000462927	KCNQ4	P56696	695 aa		12	□□□□□ -0.49
CYTH4-208	ENST00000462927	NEXN	Q0ZGT2	675 aa		12	□□□□□ -0.49
CYTH4-208	ENST00000462927	GAS2L3	Q86XJ1	694 aa		12	□□□□□ -0.49
CYTH4-208	ENST00000462927	ATRN	O75882	1429 aa		11.99	□□□□□ -0.49
CYTH4-208	ENST00000462927	LRRC37A3	O60309	1634 aa		11.99	□□□□□ -0.49
CYTH4-208	ENST00000462927	TRIM37	O94972	964 aa		11.99	□□□□□ -0.49
CYTH4-208	ENST00000462927	LOC102724428	A0A0B4J2F2	783 aa		11.99	□□□□□ -0.49
CYTH4-208	ENST00000462927	SIK1	P57059	783 aa		11.99	□□□□□ -0.49
CYTH4-208	ENST00000462927	DNAAF4	Q8WXU2	420 aa		11.99	□□□□□ -0.49
CYTH4-208	ENST00000462927	CIZ1	Q9ULV3	898 aa	Predicted RBP	11.99	□□□□□ -0.49
CYTH4-208	ENST00000462927	MAP3K2	Q9Y2U5	619 aa		11.99	□□□□□ -0.49
CYTH4-208	ENST00000462927	NASP	P49321	788 aa	Predicted RBP	11.99	□□□□□ -0.49
CYTH4-208	ENST00000462927	BCL9	O00512	1426 aa		11.99	□□□□□ -0.49
CYTH4-208	ENST00000462927	PALLD	Q8WX93	1383 aa		11.98	□□□□□ -0.49
CYTH4-208	ENST00000462927	CCDC173	Q0VFZ6	552 aa		11.98	□□□□□ -0.49
CYTH4-208	ENST00000462927	FAM196A	Q6ZSG2	479 aa		11.98	□□□□□ -0.49
CYTH4-208	ENST00000462927	PDCL3	Q9H2J4	239 aa		11.98	□□□□□ -0.49
CYTH4-208	ENST00000462927	ZBTB3	Q9H5J0	574 aa		11.98	□□□□□ -0.49
CYTH4-208	ENST00000462927	CCT4	P50991	539 aa	Known RBP	11.98	□□□□□ -0.49
CYTH4-208	ENST00000462927	BRPF1	P55201	1214 aa	Predicted RBP	11.98	□□□□□ -0.49
CYTH4-208	ENST00000462927	SRCIN1	Q9C0H9	1055 aa		11.98	□□□□□ -0.49
CYTH4-208	ENST00000462927	C9orf78	Q9NZ63	289 aa	Predicted RBP	11.98	□□□□□ -0.49
CYTH4-208	ENST00000462927	PTF1A	Q7RTS3	328 aa		11.98	□□□□□ -0.49
CYTH4-208	ENST00000462927	DDX49	Q9Y6V7	483 aa	Known RBP	11.97	□□□□□ -0.49
CYTH4-208	ENST00000462927	KIF6	Q6ZMV9	814 aa		11.97	□□□□□ -0.49
CYTH4-208	ENST00000462927	ANKRD13D	Q6ZTN6	518 aa		11.97	□□□□□ -0.49
CYTH4-208	ENST00000462927	CCNL1	Q9UK58	526 aa	Predicted RBP	11.97	□□□□□ -0.49
CYTH4-208	ENST00000462927	SMC5	Q8IY18	1101 aa		11.96	□□□□□ -0.49
CYTH4-208	ENST00000462927	SNX21	Q969T3	373 aa		11.96	□□□□□ -0.49
CYTH4-208	ENST00000462927	MYD88	Q99836	296 aa		11.96	□□□□□ -0.49
CYTH4-208	ENST00000462927	POTEA	Q6S8J7	498 aa		11.96	□□□□□ -0.5
CYTH4-208	ENST00000462927	KSR2	Q6VAB6	950 aa		11.96	□□□□□ -0.5
CYTH4-208	ENST00000462927	ZSCAN30	Q86W11	494 aa		11.96	□□□□□ -0.5
CYTH4-208	ENST00000462927	GLI3	P10071	1580 aa		11.96	□□□□□ -0.5
CYTH4-208	ENST00000462927	RBM10	P98175	930 aa	Known RBP	11.96	□□□□□ -0.5
CYTH4-208	ENST00000462927	HDAC1	Q13547	482 aa	Predicted RBP	11.96	□□□□□ -0.5
CYTH4-208	ENST00000462927	RAB3GAP1	Q15042	981 aa		11.96	□□□□□ -0.5
CYTH4-208	ENST00000462927	TAOK2	Q9UL54	1235 aa		11.96	□□□□□ -0.5
CYTH4-208	ENST00000462927	ATP5J2-PTCD1	G3V325	749 aa		11.95	□□□□□ -0.5
CYTH4-208	ENST00000462927	ZBTB1	Q9Y2K1	713 aa		11.95	□□□□□ -0.5
CYTH4-208	ENST00000462927	UBTFL1	P0CB47	393 aa	Predicted RBP	11.95	□□□□□ -0.5
CYTH4-208	ENST00000462927	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	11.95	□□□□□ -0.5
CYTH4-208	ENST00000462927	MRC1	P22897	1456 aa		11.95	□□□□□ -0.5
CYTH4-208	ENST00000462927	KDM3B	Q7LBC6	1761 aa		11.95	□□□□□ -0.5
CYTH4-208	ENST00000462927	MEIS3	Q99687	375 aa		11.95	□□□□□ -0.5
CYTH4-208	ENST00000462927	TBC1D2B	Q9UPU7	963 aa		11.95	□□□□□ -0.5
CYTH4-208	ENST00000462927	ABCC4	O15439	1325 aa		11.95	□□□□□ -0.5
CYTH4-208	ENST00000462927	ONECUT3	O60422	494 aa	Predicted RBP	11.94	□□□□□ -0.5
CYTH4-208	ENST00000462927	RBM25	P49756	843 aa	Known RBP	11.94	□□□□□ -0.5
CYTH4-208	ENST00000462927	CWF19L2	Q2TBE0	894 aa	Known RBP	11.94	□□□□□ -0.5
CYTH4-208	ENST00000462927	TTLL7	Q6ZT98	887 aa		11.94	□□□□□ -0.5
CYTH4-208	ENST00000462927	DOT1L	Q8TEK3	1739 aa		11.94	□□□□□ -0.5
CYTH4-208	ENST00000462927	SHANK3	Q9BYB0	1731 aa		11.94	□□□□□ -0.5
CYTH4-208	ENST00000462927	NBPF26	B4DH59	902 aa		11.93	□□□□□ -0.5
CYTH4-208	ENST00000462927	NBPF14	Q5TI25	921 aa		11.93	□□□□□ -0.5
CYTH4-208	ENST00000462927	NBPF10	Q6P3W6	841 aa	Known RBP	11.93	□□□□□ -0.5
CYTH4-208	ENST00000462927	NBPF15	Q8N660	670 aa		11.93	□□□□□ -0.5
CYTH4-208	ENST00000462927	FAM13B	Q9NYF5	915 aa		11.93	□□□□□ -0.5
CYTH4-208	ENST00000462927	FAM177B	A6PVY3	158 aa		11.93	□□□□□ -0.5
CYTH4-208	ENST00000462927	APBA3	O96018	575 aa		11.93	□□□□□ -0.5
CYTH4-208	ENST00000462927	GNAI3	P08754	354 aa		11.93	□□□□□ -0.5
CYTH4-208	ENST00000462927	SSFA2	P28290	1259 aa		11.93	□□□□□ -0.5
CYTH4-208	ENST00000462927	CRKL	P46109	303 aa	Known RBP	11.93	□□□□□ -0.5
CYTH4-208	ENST00000462927	SLC4A9	Q96Q91	983 aa		11.93	□□□□□ -0.5
CYTH4-208	ENST00000462927	CCDC87	Q9NVE4	849 aa		11.93	□□□□□ -0.5
CYTH4-208	ENST00000462927	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	11.93	□□□□□ -0.5
CYTH4-208	ENST00000462927	PDIA6	Q15084	440 aa		11.93	□□□□□ -0.5
CYTH4-208	ENST00000462927	INTS3	Q68E01	1043 aa	Known RBP	11.93	□□□□□ -0.5
CYTH4-208	ENST00000462927	R3HCC1	Q9Y3T6	440 aa	Known RBP	11.93	□□□□□ -0.5
CYTH4-208	ENST00000462927	ITGB4	P16144	1822 aa		11.93	□□□□□ -0.5
CYTH4-208	ENST00000462927		K7ELQ4	463 aa	Predicted RBP	11.92	□□□□□ -0.5
CYTH4-208	ENST00000462927	NPHP1	O15259	732 aa		11.92	□□□□□ -0.5
CYTH4-208	ENST00000462927	SF3B2	Q13435	895 aa	Known RBP	11.92	□□□□□ -0.5
CYTH4-208	ENST00000462927	PHF14	O94880	888 aa		11.92	□□□□□ -0.5
CYTH4-208	ENST00000462927	CYP19A1	P11511	503 aa	Predicted RBP	11.92	□□□□□ -0.5
CYTH4-208	ENST00000462927	ILDR1	Q86SU0	546 aa	Predicted RBP	11.92	□□□□□ -0.5
CYTH4-208	ENST00000462927	DZIP3	Q86Y13	1208 aa	Known RBP	11.92	□□□□□ -0.5
CYTH4-208	ENST00000462927	BCL11B	Q9C0K0	894 aa	Predicted RBP	11.92	□□□□□ -0.5
CYTH4-208	ENST00000462927	WNK3	Q9BYP7	1800 aa		11.92	□□□□□ -0.5
CYTH4-208	ENST00000462927	ZBTB7B	O15156	539 aa	Predicted RBP	11.92	□□□□□ -0.5
CYTH4-208	ENST00000462927	GPT	P24298	496 aa		11.92	□□□□□ -0.5
CYTH4-208	ENST00000462927	JARID2	Q92833	1246 aa	Predicted RBP	11.92	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms