RNA–Protein interactions for RNA: ENST00000461990.1

LINC01140-201, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 1 (best) BASIC

Gene LINC01140, Length 3,181 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-201ENST00000461990 STAG1Q8WVM7 1258 aa10.85□□□□□ -0.67
LINC01140-201ENST00000461990 SH3BP1Q9Y3L3 701 aa10.85□□□□□ -0.67
LINC01140-201ENST00000461990 KLHL33A6NCF5 533 aa10.85□□□□□ -0.67
LINC01140-201ENST00000461990 ERC2O15083 957 aa10.85□□□□□ -0.67
LINC01140-201ENST00000461990 SASH3O75995 380 aa10.85□□□□□ -0.67
LINC01140-201ENST00000461990 EXOSC9Q06265 439 aaKnown RBP10.85□□□□□ -0.67
LINC01140-201ENST00000461990 RBM43Q6ZSC3 357 aaKnown RBP10.85□□□□□ -0.67
LINC01140-201ENST00000461990 SRRTQ9BXP5 876 aaKnown RBP10.85□□□□□ -0.67
LINC01140-201ENST00000461990 CLIP2Q9UDT6 1046 aa10.85□□□□□ -0.67
LINC01140-201ENST00000461990 NEK4P51957 841 aa10.84□□□□□ -0.67
LINC01140-201ENST00000461990 CCZ1BP86790 482 aa10.84□□□□□ -0.67
LINC01140-201ENST00000461990 CCZ1P86791 482 aaPredicted RBP10.84□□□□□ -0.67
LINC01140-201ENST00000461990 TMEM132AQ24JP5 1023 aa10.84□□□□□ -0.67
LINC01140-201ENST00000461990 NBPF9Q3BBW0 867 aa10.84□□□□□ -0.67
LINC01140-201ENST00000461990 MAP9Q49MG5 647 aa10.84□□□□□ -0.67
LINC01140-201ENST00000461990 DRC7Q8IY82 874 aa10.84□□□□□ -0.67
LINC01140-201ENST00000461990 MRFAP1L1Q96HT8 127 aa10.84□□□□□ -0.67
LINC01140-201ENST00000461990 ATP6V1DQ9Y5K8 247 aa10.84□□□□□ -0.67
LINC01140-201ENST00000461990 CAVIN2O95810 425 aa10.84□□□□□ -0.67
LINC01140-201ENST00000461990 ZSCAN22P10073 491 aaPredicted RBP10.84□□□□□ -0.67
LINC01140-201ENST00000461990 TYRO3Q06418 890 aa10.84□□□□□ -0.67
LINC01140-201ENST00000461990 NEUROD2Q15784 382 aa10.84□□□□□ -0.67
LINC01140-201ENST00000461990 ZNF428Q96B54 188 aa10.84□□□□□ -0.67
LINC01140-201ENST00000461990 CBX8Q9HC52 389 aa10.84□□□□□ -0.67
LINC01140-201ENST00000461990 FANCAO15360 1455 aa10.84□□□□□ -0.67
LINC01140-201ENST00000461990 ZRSR1Q15695 479 aaKnown RBP10.83□□□□□ -0.68
LINC01140-201ENST00000461990 ZKSCAN8Q15776 578 aaPredicted RBP10.83□□□□□ -0.68
LINC01140-201ENST00000461990 FAM43BQ6ZT52 329 aaPredicted RBP10.83□□□□□ -0.68
LINC01140-201ENST00000461990 NBPF11Q86T75 865 aa10.83□□□□□ -0.68
LINC01140-201ENST00000461990 ARHGAP45Q92619 1136 aa10.83□□□□□ -0.68
LINC01140-201ENST00000461990 MYO3AQ8NEV4 1616 aa10.83□□□□□ -0.68
LINC01140-201ENST00000461990 KIF24Q5T7B8 1368 aa10.83□□□□□ -0.68
LINC01140-201ENST00000461990 INO80Q9ULG1 1556 aaPredicted RBP10.83□□□□□ -0.68
LINC01140-201ENST00000461990 TTC21BQ7Z4L5 1316 aa10.83□□□□□ -0.68
LINC01140-201ENST00000461990 A0A087WUV0 522 aaPredicted RBP10.83□□□□□ -0.68
LINC01140-201ENST00000461990 CC2D1AQ6P1N0 951 aaPredicted RBP10.83□□□□□ -0.68
LINC01140-201ENST00000461990 TRIM5Q9C035 493 aa10.83□□□□□ -0.68
LINC01140-201ENST00000461990 ZCCHC17Q9NP64 241 aaKnown RBP10.83□□□□□ -0.68
LINC01140-201ENST00000461990 EFCAB8A8MWE9 144 aa10.83□□□□□ -0.68
LINC01140-201ENST00000461990 LMAN1P49257 510 aa10.83□□□□□ -0.68
LINC01140-201ENST00000461990 TADA2BQ86TJ2 420 aa10.83□□□□□ -0.68
LINC01140-201ENST00000461990 LUZP1Q86V48 1076 aa10.83□□□□□ -0.68
LINC01140-201ENST00000461990 CFDP1Q9UEE9 299 aaPredicted RBP10.83□□□□□ -0.68
LINC01140-201ENST00000461990 FAM135BQ49AJ0 1406 aa10.83□□□□□ -0.68
LINC01140-201ENST00000461990 SSH2Q76I76 1423 aa10.83□□□□□ -0.68
LINC01140-201ENST00000461990 YTHDC2Q9H6S0 1430 aaKnown RBP10.83□□□□□ -0.68
LINC01140-201ENST00000461990 ERVK-7P63135 1459 aa10.82□□□□□ -0.68
LINC01140-201ENST00000461990 SKILP12757 684 aa10.82□□□□□ -0.68
LINC01140-201ENST00000461990 SDSP20132 328 aa10.82□□□□□ -0.68
LINC01140-201ENST00000461990 MAP3K11Q16584 847 aa10.82□□□□□ -0.68
LINC01140-201ENST00000461990 FAM107BQ9H098 131 aa10.82□□□□□ -0.68
LINC01140-201ENST00000461990 TRAPPC8Q9Y2L5 1435 aa10.82□□□□□ -0.68
LINC01140-201ENST00000461990 PHLPP2Q6ZVD8 1323 aa10.82□□□□□ -0.68
LINC01140-201ENST00000461990 PSDA5PKW4 1024 aaPredicted RBP10.82□□□□□ -0.68
LINC01140-201ENST00000461990 TADA3O75528 432 aa10.82□□□□□ -0.68
LINC01140-201ENST00000461990 LRRN4CLQ8ND94 238 aa10.82□□□□□ -0.68
LINC01140-201ENST00000461990 PLCD4Q9BRC7 762 aa10.82□□□□□ -0.68
LINC01140-201ENST00000461990 CARD14Q9BXL6 1004 aa10.82□□□□□ -0.68
LINC01140-201ENST00000461990 DCTPP1Q9H773 170 aa10.82□□□□□ -0.68
LINC01140-201ENST00000461990 MAP3K4Q9Y6R4 1608 aa10.82□□□□□ -0.68
LINC01140-201ENST00000461990 USP8P40818 1118 aa10.81□□□□□ -0.68
LINC01140-201ENST00000461990 UBXN4Q92575 508 aa10.81□□□□□ -0.68
LINC01140-201ENST00000461990 MSH6P52701 1360 aa10.81□□□□□ -0.68
LINC01140-201ENST00000461990 NPM1P06748 294 aaKnown RBP eCLIP10.81□□□□□ -0.68
LINC01140-201ENST00000461990 SEMA3FQ13275 785 aa10.81□□□□□ -0.68
LINC01140-201ENST00000461990 SNW1Q13573 536 aaKnown RBP10.81□□□□□ -0.68
LINC01140-201ENST00000461990 FUT8Q9BYC5 575 aa10.81□□□□□ -0.68
LINC01140-201ENST00000461990 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.81□□□□□ -0.68
LINC01140-201ENST00000461990 ANKRD33BA6NCL7 494 aa10.81□□□□□ -0.68
LINC01140-201ENST00000461990 MAP2K7O14733 419 aa10.81□□□□□ -0.68
LINC01140-201ENST00000461990 EPB41L2O43491 1005 aaKnown RBP10.81□□□□□ -0.68
LINC01140-201ENST00000461990 F13A1P00488 732 aa10.81□□□□□ -0.68
LINC01140-201ENST00000461990 TSR2Q969E8 191 aaKnown RBP10.81□□□□□ -0.68
LINC01140-201ENST00000461990 STK26Q9P289 416 aa10.81□□□□□ -0.68
LINC01140-201ENST00000461990 UTP14AQ9BVJ6 771 aaKnown RBP10.8□□□□□ -0.68
LINC01140-201ENST00000461990 CD109Q6YHK3 1445 aa10.8□□□□□ -0.68
LINC01140-201ENST00000461990 SMC2O95347 1197 aa10.8□□□□□ -0.68
LINC01140-201ENST00000461990 SSR1P43307 286 aaKnown RBP10.8□□□□□ -0.68
LINC01140-201ENST00000461990 EIF5P55010 431 aaKnown RBP10.8□□□□□ -0.68
LINC01140-201ENST00000461990 ERC1Q8IUD2 1116 aa10.8□□□□□ -0.68
LINC01140-201ENST00000461990 DNAAF4Q8WXU2 420 aa10.8□□□□□ -0.68
LINC01140-201ENST00000461990 TTC41PQ6P2S7 1318 aa10.8□□□□□ -0.68
LINC01140-201ENST00000461990 LIG1P18858 919 aa10.79□□□□□ -0.68
LINC01140-201ENST00000461990 ERCC3P19447 782 aa10.79□□□□□ -0.68
LINC01140-201ENST00000461990 GPR161Q8N6U8 529 aaKnown RBP10.79□□□□□ -0.68
LINC01140-201ENST00000461990 ABCC4O15439 1325 aa10.79□□□□□ -0.68
LINC01140-201ENST00000461990 SEC31AO94979 1220 aaKnown RBP10.79□□□□□ -0.68
LINC01140-201ENST00000461990 ANO6Q4KMQ2 910 aa10.79□□□□□ -0.68
LINC01140-201ENST00000461990 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.79□□□□□ -0.68
LINC01140-201ENST00000461990 NUP62CLQ9H1M0 184 aa10.79□□□□□ -0.68
LINC01140-201ENST00000461990 TTC36A6NLP5 189 aa10.79□□□□□ -0.68
LINC01140-201ENST00000461990 NPHP1O15259 732 aa10.79□□□□□ -0.68
LINC01140-201ENST00000461990 GSDMDP57764 484 aa10.79□□□□□ -0.68
LINC01140-201ENST00000461990 FAXDC2Q96IV6 333 aa10.79□□□□□ -0.68
LINC01140-201ENST00000461990 CCDC69A6NI79 296 aa10.78□□□□□ -0.68
LINC01140-201ENST00000461990 H3BQF6 201 aa10.78□□□□□ -0.68
LINC01140-201ENST00000461990 STX6O43752 255 aa10.78□□□□□ -0.68
LINC01140-201ENST00000461990 DHX8Q14562 1220 aaKnown RBP10.78□□□□□ -0.68
LINC01140-201ENST00000461990 JAKMIP3Q5VZ66 844 aa10.78□□□□□ -0.68
LINC01140-201ENST00000461990 FAM212AQ96EL1 285 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms