RNA–Protein interactions for RNA: ENST00000461187.5

SMPD4-216, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 659 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-216ENST00000461187 CNBD1Q8NA66 436 aa19.58■□□□□ 0.72
SMPD4-216ENST00000461187 FSTL1Q12841 308 aa19.57■□□□□ 0.72
SMPD4-216ENST00000461187 GLTPD2A6NH11 291 aa19.56■□□□□ 0.72
SMPD4-216ENST00000461187 NBPF26B4DH59 902 aa19.56■□□□□ 0.72
SMPD4-216ENST00000461187 C21orf2O43822 256 aa19.56■□□□□ 0.72
SMPD4-216ENST00000461187 TAF7Q15545 349 aaPredicted RBP19.56■□□□□ 0.72
SMPD4-216ENST00000461187 NBPF10Q6P3W6 841 aaKnown RBP19.56■□□□□ 0.72
SMPD4-216ENST00000461187 CLEC4GQ6UXB4 293 aa19.56■□□□□ 0.72
SMPD4-216ENST00000461187 NBPF15Q8N660 670 aa19.56■□□□□ 0.72
SMPD4-216ENST00000461187 ST5P78524 1137 aa19.55■□□□□ 0.72
SMPD4-216ENST00000461187 ZNF219Q9P2Y4 722 aaPredicted RBP19.55■□□□□ 0.72
SMPD4-216ENST00000461187 NPHP1O15259 732 aa19.54■□□□□ 0.72
SMPD4-216ENST00000461187 SRGNP10124 158 aa19.54■□□□□ 0.72
SMPD4-216ENST00000461187 STYK1Q6J9G0 422 aa19.54■□□□□ 0.72
SMPD4-216ENST00000461187 MIS18AQ9NYP9 233 aa19.54■□□□□ 0.72
SMPD4-216ENST00000461187 IFFO2Q5TF58 517 aa19.53■□□□□ 0.72
SMPD4-216ENST00000461187 CNKSR1Q969H4 720 aa19.53■□□□□ 0.72
SMPD4-216ENST00000461187 PLEKHF1Q96S99 279 aa19.53■□□□□ 0.72
SMPD4-216ENST00000461187 ZNF652Q9Y2D9 606 aa19.53■□□□□ 0.72
SMPD4-216ENST00000461187 RGL2O15211 777 aa19.52■□□□□ 0.72
SMPD4-216ENST00000461187 VEGFAP15692 232 aaPredicted RBP19.52■□□□□ 0.72
SMPD4-216ENST00000461187 NBPF5PQ86XG9 351 aaPredicted RBP19.52■□□□□ 0.72
SMPD4-216ENST00000461187 MASTLQ96GX5 879 aa19.52■□□□□ 0.72
SMPD4-216ENST00000461187 PCNTO95613 3336 aa19.52■□□□□ 0.72
SMPD4-216ENST00000461187 LTBP3Q9NS15 1303 aa19.51■□□□□ 0.71
SMPD4-216ENST00000461187 HTRA3P83110 453 aa19.51■□□□□ 0.71
SMPD4-216ENST00000461187 PRPF40BQ6NWY9 871 aaKnown RBP19.51■□□□□ 0.71
SMPD4-216ENST00000461187 SMC1BQ8NDV3 1235 aa19.51■□□□□ 0.71
SMPD4-216ENST00000461187 NEFMP07197 916 aa19.5■□□□□ 0.71
SMPD4-216ENST00000461187 SCN4AP35499 1836 aa19.5■□□□□ 0.71
SMPD4-216ENST00000461187 POTECB2RU33 542 aa19.49■□□□□ 0.71
SMPD4-216ENST00000461187 ERFEQ4G0M1 354 aa19.49■□□□□ 0.71
SMPD4-216ENST00000461187 TAOK3Q9H2K8 898 aa19.49■□□□□ 0.71
SMPD4-216ENST00000461187 NIP7Q9Y221 180 aaKnown RBP eCLIP19.49■□□□□ 0.71
SMPD4-216ENST00000461187 KLRG2A4D1S0 409 aaPredicted RBP19.48■□□□□ 0.71
SMPD4-216ENST00000461187 NFE2L2Q16236 605 aa19.48■□□□□ 0.71
SMPD4-216ENST00000461187 HLFQ16534 295 aa19.48■□□□□ 0.71
SMPD4-216ENST00000461187 DPY19L2Q6NUT2 758 aa19.48■□□□□ 0.71
SMPD4-216ENST00000461187 TPTE2Q6XPS3 522 aa19.48■□□□□ 0.71
SMPD4-216ENST00000461187 PNISRQ8TF01 805 aaKnown RBP19.48■□□□□ 0.71
SMPD4-216ENST00000461187 SOGA3Q5TF21 947 aa19.47■□□□□ 0.71
SMPD4-216ENST00000461187 C7orf43Q8WVR3 580 aa19.47■□□□□ 0.71
SMPD4-216ENST00000461187 KLRG1Q96E93 195 aa19.47■□□□□ 0.71
SMPD4-216ENST00000461187 THUMPD2Q9BTF0 503 aaKnown RBP19.47■□□□□ 0.71
SMPD4-216ENST00000461187 NPR1P16066 1061 aa19.46■□□□□ 0.71
SMPD4-216ENST00000461187 EIF4A1P60842 406 aaKnown RBP19.46■□□□□ 0.71
SMPD4-216ENST00000461187 FAM177BA6PVY3 158 aa19.45■□□□□ 0.7
SMPD4-216ENST00000461187 ANKRD36CQ5JPF3 1778 aa19.44■□□□□ 0.7
SMPD4-216ENST00000461187 JMYQ8N9B5 988 aa19.44■□□□□ 0.7
SMPD4-216ENST00000461187 PNNQ9H307 717 aaKnown RBP19.44■□□□□ 0.7
SMPD4-216ENST00000461187 NGEFQ8N5V2 710 aa19.43■□□□□ 0.7
SMPD4-216ENST00000461187 MAPK8IP3Q9UPT6 1336 aa19.43■□□□□ 0.7
SMPD4-216ENST00000461187 ERVV-1B6SEH8 477 aa19.42■□□□□ 0.7
SMPD4-216ENST00000461187 DDNO94850 711 aaPredicted RBP19.42■□□□□ 0.7
SMPD4-216ENST00000461187 CCDC93Q567U6 631 aa19.42■□□□□ 0.7
SMPD4-216ENST00000461187 TTLL7Q6ZT98 887 aa19.42■□□□□ 0.7
SMPD4-216ENST00000461187 RRP7AQ9Y3A4 280 aaKnown RBP19.42■□□□□ 0.7
SMPD4-216ENST00000461187 MAP3K15Q6ZN16 1313 aa19.42■□□□□ 0.7
SMPD4-216ENST00000461187 LAMB2P55268 1798 aa19.42■□□□□ 0.7
SMPD4-216ENST00000461187 OLFM4Q6UX06 510 aa19.41■□□□□ 0.7
SMPD4-216ENST00000461187 ABCC12Q96J65 1359 aa19.41■□□□□ 0.7
SMPD4-216ENST00000461187 MYL6BP14649 208 aa19.4■□□□□ 0.7
SMPD4-216ENST00000461187 GTF2E1P29083 439 aaPredicted RBP19.4■□□□□ 0.7
SMPD4-216ENST00000461187 FKBP4Q02790 459 aaKnown RBP eCLIP19.4■□□□□ 0.7
SMPD4-216ENST00000461187 ALDH1B1P30837 517 aa19.39■□□□□ 0.69
SMPD4-216ENST00000461187 KIF6Q6ZMV9 814 aa19.39■□□□□ 0.69
SMPD4-216ENST00000461187 NUTM1Q86Y26 1132 aa19.39■□□□□ 0.69
SMPD4-216ENST00000461187 NYXQ9GZU5 481 aa19.39■□□□□ 0.69
SMPD4-216ENST00000461187 RALBP1Q15311 655 aa19.38■□□□□ 0.69
SMPD4-216ENST00000461187 CRY2Q49AN0 593 aa19.38■□□□□ 0.69
SMPD4-216ENST00000461187 RTKN2Q8IZC4 609 aa19.38■□□□□ 0.69
SMPD4-216ENST00000461187 SNED1Q8TER0 1413 aa19.38■□□□□ 0.69
SMPD4-216ENST00000461187 ZNF277Q9NRM2 450 aaPredicted RBP19.38■□□□□ 0.69
SMPD4-216ENST00000461187 RIC1Q4ADV7 1423 aa19.37■□□□□ 0.69
SMPD4-216ENST00000461187 IBTKQ9P2D0 1353 aaPredicted RBP19.37■□□□□ 0.69
SMPD4-216ENST00000461187 ERBB4Q15303 1308 aa19.37■□□□□ 0.69
SMPD4-216ENST00000461187 UBN2Q6ZU65 1347 aa19.37■□□□□ 0.69
SMPD4-216ENST00000461187 RIPK4P57078 832 aa19.37■□□□□ 0.69
SMPD4-216ENST00000461187 ZBTB3Q9H5J0 574 aa19.37■□□□□ 0.69
SMPD4-216ENST00000461187 TSPYL4Q9UJ04 414 aa19.37■□□□□ 0.69
SMPD4-216ENST00000461187 TAF1P21675 1872 aa19.37■□□□□ 0.69
SMPD4-216ENST00000461187 POTEIP0CG38 1075 aa19.36■□□□□ 0.69
SMPD4-216ENST00000461187 POTEJP0CG39 1038 aa19.36■□□□□ 0.69
SMPD4-216ENST00000461187 GPTP24298 496 aa19.36■□□□□ 0.69
SMPD4-216ENST00000461187 ZNF34Q8IZ26 560 aa19.36■□□□□ 0.69
SMPD4-216ENST00000461187 L3MBTL3Q96JM7 780 aaPredicted RBP19.36■□□□□ 0.69
SMPD4-216ENST00000461187 ADAMTSL1Q8N6G6 1762 aa19.36■□□□□ 0.69
SMPD4-216ENST00000461187 SUSD4Q5VX71 490 aa19.35■□□□□ 0.69
SMPD4-216ENST00000461187 CHADLQ6NUI6 762 aa19.35■□□□□ 0.69
SMPD4-216ENST00000461187 GIGYF2Q6Y7W6 1299 aaKnown RBP19.35■□□□□ 0.69
SMPD4-216ENST00000461187 LRP10Q7Z4F1 713 aa19.35■□□□□ 0.69
SMPD4-216ENST00000461187 ZNF541Q9H0D2 1346 aa19.34■□□□□ 0.69
SMPD4-216ENST00000461187 TMPOP42166 694 aaKnown RBP19.34■□□□□ 0.69
SMPD4-216ENST00000461187 PDIA6Q15084 440 aa19.34■□□□□ 0.69
SMPD4-216ENST00000461187 SYNE4Q8N205 404 aa19.34■□□□□ 0.69
SMPD4-216ENST00000461187 BABAM1Q9NWV8 329 aa19.34■□□□□ 0.69
SMPD4-216ENST00000461187 IQCA1LA6NCM1 817 aa19.33■□□□□ 0.68
SMPD4-216ENST00000461187 NTSR2O95665 410 aa19.33■□□□□ 0.68
SMPD4-216ENST00000461187 HOXA10P31260 410 aaPredicted RBP19.33■□□□□ 0.68
SMPD4-216ENST00000461187 IARSP41252 1262 aaKnown RBP19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms