RNA–Protein interactions for RNA: ENST00000460828.5

PCMT1-204, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase, humanhuman

TSL 5

Gene PCMT1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMT1-204ENST00000460828 TAF1DQ9H5J8 278 aaPredicted RBP22.87■■□□□ 1.25
PCMT1-204ENST00000460828 HSPA5P11021 654 aaKnown RBP22.86■■□□□ 1.25
PCMT1-204ENST00000460828 IL6STP40189 918 aaPredicted RBP22.86■■□□□ 1.25
PCMT1-204ENST00000460828 LBX1P52954 281 aa22.85■■□□□ 1.25
PCMT1-204ENST00000460828 CCDC93Q567U6 631 aa22.85■■□□□ 1.25
PCMT1-204ENST00000460828 ZNF496Q96IT1 587 aaPredicted RBP22.85■■□□□ 1.25
PCMT1-204ENST00000460828 L3MBTL3Q96JM7 780 aaPredicted RBP22.85■■□□□ 1.25
PCMT1-204ENST00000460828 SRGNP10124 158 aa22.84■■□□□ 1.25
PCMT1-204ENST00000460828 ZNF790Q6PG37 636 aa22.83■■□□□ 1.25
PCMT1-204ENST00000460828 HACL1Q9UJ83 578 aa22.83■■□□□ 1.25
PCMT1-204ENST00000460828 SIPA1L3O60292 1781 aaPredicted RBP22.82■■□□□ 1.24
PCMT1-204ENST00000460828 DIAPH1O60610 1272 aaKnown RBP22.82■■□□□ 1.24
PCMT1-204ENST00000460828 ZNF541Q9H0D2 1346 aa22.82■■□□□ 1.24
PCMT1-204ENST00000460828 CAMTA2O94983 1202 aa22.81■■□□□ 1.24
PCMT1-204ENST00000460828 NBPF5PQ86XG9 351 aaPredicted RBP22.81■■□□□ 1.24
PCMT1-204ENST00000460828 DZIP3Q86Y13 1208 aaKnown RBP22.81■■□□□ 1.24
PCMT1-204ENST00000460828 FMNL2Q96PY5 1086 aa22.81■■□□□ 1.24
PCMT1-204ENST00000460828 A1BGP04217 495 aa22.8■■□□□ 1.24
PCMT1-204ENST00000460828 EPHX2P34913 555 aa22.8■■□□□ 1.24
PCMT1-204ENST00000460828 ZNF277Q9NRM2 450 aaPredicted RBP22.8■■□□□ 1.24
PCMT1-204ENST00000460828 WBP1LQ9NX94 342 aa22.8■■□□□ 1.24
PCMT1-204ENST00000460828 ABT1Q9ULW3 272 aaKnown RBP22.8■■□□□ 1.24
PCMT1-204ENST00000460828 FKBP4Q02790 459 aaKnown RBP eCLIP22.79■■□□□ 1.24
PCMT1-204ENST00000460828 ABHD8Q96I13 439 aa22.79■■□□□ 1.24
PCMT1-204ENST00000460828 ADAMTSL1Q8N6G6 1762 aa22.78■■□□□ 1.24
PCMT1-204ENST00000460828 GNAT3A8MTJ3 354 aa22.78■■□□□ 1.24
PCMT1-204ENST00000460828 ITGBL1O95965 494 aaPredicted RBP22.78■■□□□ 1.24
PCMT1-204ENST00000460828 DEFB115Q30KQ5 88 aa22.78■■□□□ 1.24
PCMT1-204ENST00000460828 FAM161AQ3B820 660 aa22.78■■□□□ 1.24
PCMT1-204ENST00000460828 PNMA8AQ86V59 439 aaPredicted RBP22.78■■□□□ 1.24
PCMT1-204ENST00000460828 GAS2L2Q8NHY3 880 aa22.78■■□□□ 1.24
PCMT1-204ENST00000460828 ZNF652Q9Y2D9 606 aa22.78■■□□□ 1.24
PCMT1-204ENST00000460828 RNF123Q5XPI4 1314 aa22.78■■□□□ 1.24
PCMT1-204ENST00000460828 SLC34A2O95436 690 aa22.77■■□□□ 1.24
PCMT1-204ENST00000460828 HSPA8P11142 646 aaKnown RBP22.77■■□□□ 1.24
PCMT1-204ENST00000460828 NPR1P16066 1061 aa22.77■■□□□ 1.24
PCMT1-204ENST00000460828 PAXIP1Q6ZW49 1069 aaPredicted RBP22.77■■□□□ 1.24
PCMT1-204ENST00000460828 RASSF10A6NK89 507 aa22.76■■□□□ 1.23
PCMT1-204ENST00000460828 U2SURPO15042 1029 aaKnown RBP22.76■■□□□ 1.23
PCMT1-204ENST00000460828 MAP2K1Q02750 393 aaPredicted RBP22.76■■□□□ 1.23
PCMT1-204ENST00000460828 AMER1Q5JTC6 1135 aaPredicted RBP22.76■■□□□ 1.23
PCMT1-204ENST00000460828 MAP1SQ66K74 1059 aaPredicted RBP22.76■■□□□ 1.23
PCMT1-204ENST00000460828 CNTROBQ8N137 903 aa22.76■■□□□ 1.23
PCMT1-204ENST00000460828 WDR33Q9C0J8 1336 aaKnown RBP22.76■■□□□ 1.23
PCMT1-204ENST00000460828 IARSP41252 1262 aaKnown RBP22.74■■□□□ 1.23
PCMT1-204ENST00000460828 PIP4K2AP48426 406 aaPredicted RBP22.74■■□□□ 1.23
PCMT1-204ENST00000460828 RTKN2Q8IZC4 609 aa22.74■■□□□ 1.23
PCMT1-204ENST00000460828 IL17REQ8NFR9 667 aa22.74■■□□□ 1.23
PCMT1-204ENST00000460828 BTBD11A6QL63 1104 aa22.73■■□□□ 1.23
PCMT1-204ENST00000460828 C7orf43Q8WVR3 580 aa22.73■■□□□ 1.23
PCMT1-204ENST00000460828 BEGAINQ9BUH8 593 aa22.73■■□□□ 1.23
PCMT1-204ENST00000460828 FAM177BA6PVY3 158 aa22.72■■□□□ 1.23
PCMT1-204ENST00000460828 TRIM26Q12899 539 aaPredicted RBP22.72■■□□□ 1.23
PCMT1-204ENST00000460828 GRM1Q13255 1194 aa22.72■■□□□ 1.23
PCMT1-204ENST00000460828 CC2D1BQ5T0F9 858 aaKnown RBP22.72■■□□□ 1.23
PCMT1-204ENST00000460828 OLFM4Q6UX06 510 aa22.72■■□□□ 1.23
PCMT1-204ENST00000460828 LMOD1P29536 600 aaPredicted RBP22.71■■□□□ 1.23
PCMT1-204ENST00000460828 CLEC4GQ6UXB4 293 aa22.71■■□□□ 1.23
PCMT1-204ENST00000460828 TPTE2Q6XPS3 522 aa22.71■■□□□ 1.23
PCMT1-204ENST00000460828 JDP2Q8WYK2 163 aa22.71■■□□□ 1.23
PCMT1-204ENST00000460828 NIP7Q9Y221 180 aaKnown RBP eCLIP22.71■■□□□ 1.23
PCMT1-204ENST00000460828 CCDC85CA6NKD9 419 aa22.7■■□□□ 1.22
PCMT1-204ENST00000460828 GTF2E1P29083 439 aaPredicted RBP22.7■■□□□ 1.22
PCMT1-204ENST00000460828 GPC2Q8N158 579 aa22.7■■□□□ 1.22
PCMT1-204ENST00000460828 SYNE4Q8N205 404 aa22.7■■□□□ 1.22
PCMT1-204ENST00000460828 GJA3Q9Y6H8 435 aa22.7■■□□□ 1.22
PCMT1-204ENST00000460828 THSD7BQ9C0I4 1608 aa22.69■■□□□ 1.22
PCMT1-204ENST00000460828 CLSPNQ9HAW4 1339 aa22.69■■□□□ 1.22
PCMT1-204ENST00000460828 FZD9O00144 591 aa22.68■■□□□ 1.22
PCMT1-204ENST00000460828 KCNQ3O43525 872 aa22.68■■□□□ 1.22
PCMT1-204ENST00000460828 ALDH1B1P30837 517 aa22.68■■□□□ 1.22
PCMT1-204ENST00000460828 ECE1P42892 770 aa22.68■■□□□ 1.22
PCMT1-204ENST00000460828 EIF6P56537 245 aaKnown RBP22.68■■□□□ 1.22
PCMT1-204ENST00000460828 CNGB1Q14028 1251 aaPredicted RBP22.68■■□□□ 1.22
PCMT1-204ENST00000460828 DDX21Q9NR30 783 aaKnown RBP eCLIP22.68■■□□□ 1.22
PCMT1-204ENST00000460828 COL3A1P02461 1466 aaPredicted RBP22.67■■□□□ 1.22
PCMT1-204ENST00000460828 MLLT1Q03111 559 aaPredicted RBP22.67■■□□□ 1.22
PCMT1-204ENST00000460828 PCGF6Q9BYE7 350 aa22.67■■□□□ 1.22
PCMT1-204ENST00000460828 USP16Q9Y5T5 823 aa22.67■■□□□ 1.22
PCMT1-204ENST00000460828 CEMIPQ8WUJ3 1361 aa22.66■■□□□ 1.22
PCMT1-204ENST00000460828 CAPNS2Q96L46 248 aa22.66■■□□□ 1.22
PCMT1-204ENST00000460828 CFAP44Q96MT7 982 aa22.65■■□□□ 1.22
PCMT1-204ENST00000460828 TRPM7Q96QT4 1865 aa22.64■■□□□ 1.22
PCMT1-204ENST00000460828 PRAMEF22A3QJZ6 481 aa22.64■■□□□ 1.21
PCMT1-204ENST00000460828 KLRG2A4D1S0 409 aaPredicted RBP22.64■■□□□ 1.21
PCMT1-204ENST00000460828 LTBP1Q14766 1721 aa22.63■■□□□ 1.21
PCMT1-204ENST00000460828 SNRPA1P09661 255 aaKnown RBP22.63■■□□□ 1.21
PCMT1-204ENST00000460828 CYP4F22Q6NT55 531 aa22.63■■□□□ 1.21
PCMT1-204ENST00000460828 PSMD1Q99460 953 aa22.63■■□□□ 1.21
PCMT1-204ENST00000460828 RTF1Q92541 710 aaKnown RBP22.62■■□□□ 1.21
PCMT1-204ENST00000460828 GPR101Q96P66 508 aaPredicted RBP22.62■■□□□ 1.21
PCMT1-204ENST00000460828 KIF7Q2M1P5 1343 aa22.61■■□□□ 1.21
PCMT1-204ENST00000460828 RPGRQ92834 1020 aaKnown RBP22.61■■□□□ 1.21
PCMT1-204ENST00000460828 PRKAR2BP31323 418 aa22.6■■□□□ 1.21
PCMT1-204ENST00000460828 FMR1Q06787 632 aaKnown RBP eCLIP22.6■■□□□ 1.21
PCMT1-204ENST00000460828 LARGE2Q8N3Y3 721 aa22.6■■□□□ 1.21
PCMT1-204ENST00000460828 NYXQ9GZU5 481 aa22.6■■□□□ 1.21
PCMT1-204ENST00000460828 TSKSQ9UJT2 592 aa22.6■■□□□ 1.21
PCMT1-204ENST00000460828 LAMB4A4D0S4 1761 aa22.6■■□□□ 1.21
PCMT1-204ENST00000460828 CC2D2BQ6DHV5 1058 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms