RNA–Protein interactions for RNA: ENST00000460609.3

RN7SL254P-201, Transcript of RNA, 7SL, cytoplasmic 254, pseudogene, humanhuman

BASIC

Gene RN7SL254P, Length 284 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL254P-201ENST00000460609 RRAGCQ9HB90 399 aa8.32□□□□□ -1.08
RN7SL254P-201ENST00000460609 LTBP3Q9NS15 1303 aa8.31□□□□□ -1.08
RN7SL254P-201ENST00000460609 TAF7Q15545 349 aaPredicted RBP8.31□□□□□ -1.08
RN7SL254P-201ENST00000460609 ERFEQ4G0M1 354 aa8.31□□□□□ -1.08
RN7SL254P-201ENST00000460609 TPTE2Q6XPS3 522 aa8.31□□□□□ -1.08
RN7SL254P-201ENST00000460609 MCM10Q7L590 875 aa8.31□□□□□ -1.08
RN7SL254P-201ENST00000460609 USP16Q9Y5T5 823 aa8.31□□□□□ -1.08
RN7SL254P-201ENST00000460609 MAPK8IP3Q9UPT6 1336 aa8.3□□□□□ -1.08
RN7SL254P-201ENST00000460609 SBF1O95248 1867 aa8.3□□□□□ -1.08
RN7SL254P-201ENST00000460609 NFKBIEO00221 500 aa8.3□□□□□ -1.08
RN7SL254P-201ENST00000460609 KCNQ3O43525 872 aa8.3□□□□□ -1.08
RN7SL254P-201ENST00000460609 C21orf2O43822 256 aa8.3□□□□□ -1.08
RN7SL254P-201ENST00000460609 SRGNP10124 158 aa8.3□□□□□ -1.08
RN7SL254P-201ENST00000460609 GTF2E1P29083 439 aaPredicted RBP8.3□□□□□ -1.08
RN7SL254P-201ENST00000460609 NPR1P16066 1061 aa8.29□□□□□ -1.08
RN7SL254P-201ENST00000460609 CCDC93Q567U6 631 aa8.29□□□□□ -1.08
RN7SL254P-201ENST00000460609 PRPF40BQ6NWY9 871 aaKnown RBP8.29□□□□□ -1.08
RN7SL254P-201ENST00000460609 KIF6Q6ZMV9 814 aa8.29□□□□□ -1.08
RN7SL254P-201ENST00000460609 KLRG1Q96E93 195 aa8.29□□□□□ -1.08
RN7SL254P-201ENST00000460609 NYXQ9GZU5 481 aa8.29□□□□□ -1.08
RN7SL254P-201ENST00000460609 ZNF219Q9P2Y4 722 aaPredicted RBP8.29□□□□□ -1.08
RN7SL254P-201ENST00000460609 NIP7Q9Y221 180 aaKnown RBP eCLIP8.29□□□□□ -1.08
RN7SL254P-201ENST00000460609 BCORQ6W2J9 1755 aa8.29□□□□□ -1.08
RN7SL254P-201ENST00000460609 WDR90Q96KV7 1748 aa8.29□□□□□ -1.08
RN7SL254P-201ENST00000460609 IQCA1LA6NCM1 817 aa8.28□□□□□ -1.08
RN7SL254P-201ENST00000460609 ALDH1B1P30837 517 aa8.28□□□□□ -1.08
RN7SL254P-201ENST00000460609 LMOD3Q0VAK6 560 aa8.28□□□□□ -1.08
RN7SL254P-201ENST00000460609 DCTN1Q14203 1278 aa8.28□□□□□ -1.08
RN7SL254P-201ENST00000460609 RTKN2Q8IZC4 609 aa8.28□□□□□ -1.08
RN7SL254P-201ENST00000460609 TIAM2Q8IVF5 1701 aa8.28□□□□□ -1.08
RN7SL254P-201ENST00000460609 ANKRD31Q8N7Z5 1873 aa8.28□□□□□ -1.08
RN7SL254P-201ENST00000460609 ERBB4Q15303 1308 aa8.28□□□□□ -1.08
RN7SL254P-201ENST00000460609 ERVV-1B6SEH8 477 aa8.27□□□□□ -1.09
RN7SL254P-201ENST00000460609 PIP4K2AP48426 406 aaPredicted RBP8.27□□□□□ -1.09
RN7SL254P-201ENST00000460609 NFE2L2Q16236 605 aa8.27□□□□□ -1.09
RN7SL254P-201ENST00000460609 GRIPAP1Q4V328 841 aa8.27□□□□□ -1.09
RN7SL254P-201ENST00000460609 CCDC24Q8N4L8 307 aa8.27□□□□□ -1.09
RN7SL254P-201ENST00000460609 DNAJC5GQ8N7S2 189 aa8.27□□□□□ -1.09
RN7SL254P-201ENST00000460609 TMX4Q9H1E5 349 aaPredicted RBP8.27□□□□□ -1.09
RN7SL254P-201ENST00000460609 LAMB4A4D0S4 1761 aa8.26□□□□□ -1.09
RN7SL254P-201ENST00000460609 PRAMEF22A3QJZ6 481 aa8.26□□□□□ -1.09
RN7SL254P-201ENST00000460609 KLRG2A4D1S0 409 aaPredicted RBP8.26□□□□□ -1.09
RN7SL254P-201ENST00000460609 FKBP4Q02790 459 aaKnown RBP eCLIP8.26□□□□□ -1.09
RN7SL254P-201ENST00000460609 RALBP1Q15311 655 aa8.26□□□□□ -1.09
RN7SL254P-201ENST00000460609 CC2D2BQ6DHV5 1058 aa8.26□□□□□ -1.09
RN7SL254P-201ENST00000460609 JMYQ8N9B5 988 aa8.26□□□□□ -1.09
RN7SL254P-201ENST00000460609 MAP3K15Q6ZN16 1313 aa8.26□□□□□ -1.09
RN7SL254P-201ENST00000460609 COL11A2P13942 1736 aaPredicted RBP8.26□□□□□ -1.09
RN7SL254P-201ENST00000460609 FER1L6Q2WGJ9 1857 aa8.26□□□□□ -1.09
RN7SL254P-201ENST00000460609 ARFGEF2Q9Y6D5 1785 aa8.25□□□□□ -1.09
RN7SL254P-201ENST00000460609 IBTKQ9P2D0 1353 aaPredicted RBP8.25□□□□□ -1.09
RN7SL254P-201ENST00000460609 FAM177BA6PVY3 158 aa8.25□□□□□ -1.09
RN7SL254P-201ENST00000460609 NBPF26B4DH59 902 aa8.25□□□□□ -1.09
RN7SL254P-201ENST00000460609 CHADLQ6NUI6 762 aa8.25□□□□□ -1.09
RN7SL254P-201ENST00000460609 NBPF10Q6P3W6 841 aaKnown RBP8.25□□□□□ -1.09
RN7SL254P-201ENST00000460609 NGEFQ8N5V2 710 aa8.25□□□□□ -1.09
RN7SL254P-201ENST00000460609 NBPF15Q8N660 670 aa8.25□□□□□ -1.09
RN7SL254P-201ENST00000460609 RPGRQ92834 1020 aaKnown RBP8.25□□□□□ -1.09
RN7SL254P-201ENST00000460609 BABAM1Q9NWV8 329 aa8.25□□□□□ -1.09
RN7SL254P-201ENST00000460609 TSPYL4Q9UJ04 414 aa8.25□□□□□ -1.09
RN7SL254P-201ENST00000460609 CCDC88AQ3V6T2 1871 aa8.25□□□□□ -1.09
RN7SL254P-201ENST00000460609 DICER1Q9UPY3 1922 aaKnown RBP8.25□□□□□ -1.09
RN7SL254P-201ENST00000460609 EIF4A1P60842 406 aaKnown RBP8.24□□□□□ -1.09
RN7SL254P-201ENST00000460609 PARP10Q53GL7 1025 aa8.24□□□□□ -1.09
RN7SL254P-201ENST00000460609 PPP1R42Q7Z4L9 355 aa8.24□□□□□ -1.09
RN7SL254P-201ENST00000460609 LDHDQ86WU2 507 aa8.24□□□□□ -1.09
RN7SL254P-201ENST00000460609 JDP2Q8WYK2 163 aa8.24□□□□□ -1.09
RN7SL254P-201ENST00000460609 L3MBTL3Q96JM7 780 aaPredicted RBP8.24□□□□□ -1.09
RN7SL254P-201ENST00000460609 PLEKHF1Q96S99 279 aa8.24□□□□□ -1.09
RN7SL254P-201ENST00000460609 MIS18AQ9NYP9 233 aa8.24□□□□□ -1.09
RN7SL254P-201ENST00000460609 RRP7AQ9Y3A4 280 aaKnown RBP8.24□□□□□ -1.09
RN7SL254P-201ENST00000460609 SLX4Q8IY92 1834 aa8.24□□□□□ -1.09
RN7SL254P-201ENST00000460609 RIC1Q4ADV7 1423 aa8.23□□□□□ -1.09
RN7SL254P-201ENST00000460609 DDNO94850 711 aaPredicted RBP8.23□□□□□ -1.09
RN7SL254P-201ENST00000460609 MYL6BP14649 208 aa8.23□□□□□ -1.09
RN7SL254P-201ENST00000460609 IARSP41252 1262 aaKnown RBP8.23□□□□□ -1.09
RN7SL254P-201ENST00000460609 HTRA3P83110 453 aa8.23□□□□□ -1.09
RN7SL254P-201ENST00000460609 HLFQ16534 295 aa8.23□□□□□ -1.09
RN7SL254P-201ENST00000460609 CRY2Q49AN0 593 aa8.23□□□□□ -1.09
RN7SL254P-201ENST00000460609 HSP90AB3PQ58FF7 597 aa8.23□□□□□ -1.09
RN7SL254P-201ENST00000460609 GIGYF2Q6Y7W6 1299 aaKnown RBP8.23□□□□□ -1.09
RN7SL254P-201ENST00000460609 PNMA8AQ86V59 439 aaPredicted RBP8.23□□□□□ -1.09
RN7SL254P-201ENST00000460609 C7orf43Q8WVR3 580 aa8.23□□□□□ -1.09
RN7SL254P-201ENST00000460609 RBM17Q96I25 401 aaKnown RBP8.23□□□□□ -1.09
RN7SL254P-201ENST00000460609 PSMD1Q99460 953 aa8.23□□□□□ -1.09
RN7SL254P-201ENST00000460609 CREBZFQ9NS37 354 aa8.23□□□□□ -1.09
RN7SL254P-201ENST00000460609 RNF123Q5XPI4 1314 aa8.23□□□□□ -1.09
RN7SL254P-201ENST00000460609 KDM3BQ7LBC6 1761 aa8.22□□□□□ -1.09
RN7SL254P-201ENST00000460609 CACNA1SQ13698 1873 aa8.22□□□□□ -1.09
RN7SL254P-201ENST00000460609 POTECB2RU33 542 aa8.22□□□□□ -1.09
RN7SL254P-201ENST00000460609 LMOD1P29536 600 aaPredicted RBP8.22□□□□□ -1.09
RN7SL254P-201ENST00000460609 EIF6P56537 245 aaKnown RBP8.22□□□□□ -1.09
RN7SL254P-201ENST00000460609 RIPK4P57078 832 aa8.22□□□□□ -1.09
RN7SL254P-201ENST00000460609 SYNE4Q8N205 404 aa8.22□□□□□ -1.09
RN7SL254P-201ENST00000460609 NLRP3Q96P20 1036 aa8.22□□□□□ -1.09
RN7SL254P-201ENST00000460609 ZBTB3Q9H5J0 574 aa8.22□□□□□ -1.09
RN7SL254P-201ENST00000460609 ZNF277Q9NRM2 450 aaPredicted RBP8.22□□□□□ -1.09
RN7SL254P-201ENST00000460609 HACL1Q9UJ83 578 aa8.22□□□□□ -1.09
RN7SL254P-201ENST00000460609 SCN4AP35499 1836 aa8.22□□□□□ -1.09
RN7SL254P-201ENST00000460609 DLG5Q8TDM6 1919 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms