RNA–Protein interactions for RNA: ENST00000460584.1

LSG1-204, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 2

Gene LSG1, Length 668 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-204ENST00000460584 SOGA3Q5TF21 947 aa15.21■□□□□ 0.03
LSG1-204ENST00000460584 NBPF10Q6P3W6 841 aaKnown RBP15.21■□□□□ 0.03
LSG1-204ENST00000460584 MCM10Q7L590 875 aa15.21■□□□□ 0.03
LSG1-204ENST00000460584 NBPF15Q8N660 670 aa15.21■□□□□ 0.03
LSG1-204ENST00000460584 MASTLQ96GX5 879 aa15.21■□□□□ 0.03
LSG1-204ENST00000460584 ZNF652Q9Y2D9 606 aa15.21■□□□□ 0.03
LSG1-204ENST00000460584 FER1L6Q2WGJ9 1857 aa15.2■□□□□ 0.02
LSG1-204ENST00000460584 COL11A2P13942 1736 aaPredicted RBP15.2■□□□□ 0.02
LSG1-204ENST00000460584 PRAMEF22A3QJZ6 481 aa15.2■□□□□ 0.02
LSG1-204ENST00000460584 ZNF622Q969S3 477 aaKnown RBP eCLIP15.2■□□□□ 0.02
LSG1-204ENST00000460584 C21orf2O43822 256 aa15.19■□□□□ 0.02
LSG1-204ENST00000460584 DPY19L2Q6NUT2 758 aa15.19■□□□□ 0.02
LSG1-204ENST00000460584 PLEKHF1Q96S99 279 aa15.19■□□□□ 0.02
LSG1-204ENST00000460584 PRPF40BQ6NWY9 871 aaKnown RBP15.18■□□□□ 0.02
LSG1-204ENST00000460584 PNISRQ8TF01 805 aaKnown RBP15.18■□□□□ 0.02
LSG1-204ENST00000460584 TAOK3Q9H2K8 898 aa15.18■□□□□ 0.02
LSG1-204ENST00000460584 ZNF330Q9Y3S2 320 aaPredicted RBP15.18■□□□□ 0.02
LSG1-204ENST00000460584 ARFGEF2Q9Y6D5 1785 aa15.18■□□□□ 0.02
LSG1-204ENST00000460584 TIAM2Q8IVF5 1701 aa15.17■□□□□ 0.02
LSG1-204ENST00000460584 DICER1Q9UPY3 1922 aaKnown RBP15.17■□□□□ 0.02
LSG1-204ENST00000460584 CNGB1Q14028 1251 aaPredicted RBP15.17■□□□□ 0.02
LSG1-204ENST00000460584 DCTN1Q14203 1278 aa15.17■□□□□ 0.02
LSG1-204ENST00000460584 TPTE2Q6XPS3 522 aa15.17■□□□□ 0.02
LSG1-204ENST00000460584 ERVV-1B6SEH8 477 aa15.16■□□□□ 0.02
LSG1-204ENST00000460584 NPR1P16066 1061 aa15.16■□□□□ 0.02
LSG1-204ENST00000460584 ERFEQ4G0M1 354 aa15.16■□□□□ 0.02
LSG1-204ENST00000460584 NBPF5PQ86XG9 351 aaPredicted RBP15.16■□□□□ 0.02
LSG1-204ENST00000460584 CCDC24Q8N4L8 307 aa15.16■□□□□ 0.02
LSG1-204ENST00000460584 SLX4Q8IY92 1834 aa15.15■□□□□ 0.02
LSG1-204ENST00000460584 PIP4K2AP48426 406 aaPredicted RBP15.15■□□□□ 0.02
LSG1-204ENST00000460584 L3MBTL3Q96JM7 780 aaPredicted RBP15.15■□□□□ 0.02
LSG1-204ENST00000460584 RIC1Q4ADV7 1423 aa15.15■□□□□ 0.02
LSG1-204ENST00000460584 IBTKQ9P2D0 1353 aaPredicted RBP15.14■□□□□ 0.01
LSG1-204ENST00000460584 EIF4A1P60842 406 aaKnown RBP15.14■□□□□ 0.01
LSG1-204ENST00000460584 HTRA3P83110 453 aa15.14■□□□□ 0.01
LSG1-204ENST00000460584 CRY2Q49AN0 593 aa15.14■□□□□ 0.01
LSG1-204ENST00000460584 NIP7Q9Y221 180 aaKnown RBP eCLIP15.14■□□□□ 0.01
LSG1-204ENST00000460584 SNED1Q8TER0 1413 aa15.14■□□□□ 0.01
LSG1-204ENST00000460584 CCDC88AQ3V6T2 1871 aa15.14■□□□□ 0.01
LSG1-204ENST00000460584 NFE2L2Q16236 605 aa15.13■□□□□ 0.01
LSG1-204ENST00000460584 CCDC93Q567U6 631 aa15.13■□□□□ 0.01
LSG1-204ENST00000460584 PNNQ9H307 717 aaKnown RBP15.13■□□□□ 0.01
LSG1-204ENST00000460584 KDM3BQ7LBC6 1761 aa15.13■□□□□ 0.01
LSG1-204ENST00000460584 ERBB4Q15303 1308 aa15.13■□□□□ 0.01
LSG1-204ENST00000460584 LAMB4A4D0S4 1761 aa15.12■□□□□ 0.01
LSG1-204ENST00000460584 NPHP1O15259 732 aa15.12■□□□□ 0.01
LSG1-204ENST00000460584 ALDH1B1P30837 517 aa15.12■□□□□ 0.01
LSG1-204ENST00000460584 FKBP4Q02790 459 aaKnown RBP eCLIP15.12■□□□□ 0.01
LSG1-204ENST00000460584 HLFQ16534 295 aa15.12■□□□□ 0.01
LSG1-204ENST00000460584 RTKN2Q8IZC4 609 aa15.12■□□□□ 0.01
LSG1-204ENST00000460584 BABAM1Q9NWV8 329 aa15.12■□□□□ 0.01
LSG1-204ENST00000460584 NEFMP07197 916 aa15.11■□□□□ 0.01
LSG1-204ENST00000460584 NYXQ9GZU5 481 aa15.11■□□□□ 0.01
LSG1-204ENST00000460584 MAP3K15Q6ZN16 1313 aa15.11■□□□□ 0.01
LSG1-204ENST00000460584 HOXA10P31260 410 aaPredicted RBP15.1■□□□□ 0.01
LSG1-204ENST00000460584 CC2D2BQ6DHV5 1058 aa15.1■□□□□ 0.01
LSG1-204ENST00000460584 CHADLQ6NUI6 762 aa15.1■□□□□ 0.01
LSG1-204ENST00000460584 MIS18AQ9NYP9 233 aa15.1■□□□□ 0.01
LSG1-204ENST00000460584 ZNF219Q9P2Y4 722 aaPredicted RBP15.1■□□□□ 0.01
LSG1-204ENST00000460584 IQCA1LA6NCM1 817 aa15.09■□□□□ 0.01
LSG1-204ENST00000460584 DDNO94850 711 aaPredicted RBP15.09■□□□□ 0.01
LSG1-204ENST00000460584 GRIPAP1Q4V328 841 aa15.09■□□□□ 0.01
LSG1-204ENST00000460584 LRP10Q7Z4F1 713 aa15.09■□□□□ 0.01
LSG1-204ENST00000460584 PSMD1Q99460 953 aa15.09■□□□□ 0.01
LSG1-204ENST00000460584 FZD9O00144 591 aa15.08■□□□□ 0
LSG1-204ENST00000460584 ZNF34Q8IZ26 560 aa15.08■□□□□ 0
LSG1-204ENST00000460584 CREBZFQ9NS37 354 aa15.08■□□□□ 0
LSG1-204ENST00000460584 DLG5Q8TDM6 1919 aa15.07■□□□□ 0
LSG1-204ENST00000460584 RALBP1Q15311 655 aa15.07■□□□□ 0
LSG1-204ENST00000460584 LDHDQ86WU2 507 aa15.07■□□□□ 0
LSG1-204ENST00000460584 TAF1DQ9H5J8 278 aaPredicted RBP15.07■□□□□ 0
LSG1-204ENST00000460584 SCN4AP35499 1836 aa15.07■□□□□ 0
LSG1-204ENST00000460584 PASKQ96RG2 1323 aa15.07■□□□□ 0
LSG1-204ENST00000460584 ABCC12Q96J65 1359 aa15.07■□□□□ 0
LSG1-204ENST00000460584 GIGYF2Q6Y7W6 1299 aaKnown RBP15.06■□□□□ 0
LSG1-204ENST00000460584 TTLL7Q6ZT98 887 aa15.06■□□□□ 0
LSG1-204ENST00000460584 UBN2Q6ZU65 1347 aa15.06■□□□□ 0
LSG1-204ENST00000460584 IARSP41252 1262 aaKnown RBP15.05■□□□□ -0
LSG1-204ENST00000460584 PDIA6Q15084 440 aa15.05■□□□□ -0
LSG1-204ENST00000460584 SLC10A5Q5PT55 438 aa15.05■□□□□ -0
LSG1-204ENST00000460584 KIF6Q6ZMV9 814 aa15.05■□□□□ -0
LSG1-204ENST00000460584 CRAMP1Q96RY5 1269 aa15.05■□□□□ -0
LSG1-204ENST00000460584 THUMPD2Q9BTF0 503 aaKnown RBP15.05■□□□□ -0
LSG1-204ENST00000460584 ZNF277Q9NRM2 450 aaPredicted RBP15.05■□□□□ -0
LSG1-204ENST00000460584 MAPK8IP3Q9UPT6 1336 aa15.05■□□□□ -0
LSG1-204ENST00000460584 RNF123Q5XPI4 1314 aa15.04■□□□□ -0
LSG1-204ENST00000460584 ZNF541Q9H0D2 1346 aa15.04■□□□□ -0
LSG1-204ENST00000460584 NTSR2O95665 410 aa15.04■□□□□ -0
LSG1-204ENST00000460584 ITGBL1O95965 494 aaPredicted RBP15.04■□□□□ -0
LSG1-204ENST00000460584 POTEIP0CG38 1075 aa15.04■□□□□ -0
LSG1-204ENST00000460584 POTEJP0CG39 1038 aa15.04■□□□□ -0
LSG1-204ENST00000460584 GTF2E1P29083 439 aaPredicted RBP15.04■□□□□ -0
LSG1-204ENST00000460584 PARP10Q53GL7 1025 aa15.04■□□□□ -0
LSG1-204ENST00000460584 COL13A1Q5TAT6 717 aaPredicted RBP15.04■□□□□ -0
LSG1-204ENST00000460584 OLFM4Q6UX06 510 aa15.04■□□□□ -0
LSG1-204ENST00000460584 SYNE4Q8N205 404 aa15.04■□□□□ -0
LSG1-204ENST00000460584 RRP7AQ9Y3A4 280 aaKnown RBP15.04■□□□□ -0
LSG1-204ENST00000460584 NUP98P52948 1817 aa15.03■□□□□ -0
LSG1-204ENST00000460584 ADAMTSL1Q8N6G6 1762 aa15.03■□□□□ -0
LSG1-204ENST00000460584 SUSD4Q5VX71 490 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms