RNA–Protein interactions for RNA: ENST00000460547.6

YIPF3-205, Transcript of Yip1 domain family member 3, humanhuman

TSL 1 (best)

Gene YIPF3, Length 1,674 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-205ENST00000460547 SRCIN1Q9C0H9 1055 aa20.95■□□□□ 0.94
YIPF3-205ENST00000460547 ADCY9O60503 1353 aa20.94■□□□□ 0.94
YIPF3-205ENST00000460547 EIF5BO60841 1220 aaKnown RBP20.94■□□□□ 0.94
YIPF3-205ENST00000460547 CABP4P57796 275 aa20.94■□□□□ 0.94
YIPF3-205ENST00000460547 ATP8B2P98198 1209 aa20.94■□□□□ 0.94
YIPF3-205ENST00000460547 DNAAF4Q8WXU2 420 aa20.94■□□□□ 0.94
YIPF3-205ENST00000460547 C22orf23Q9BZE7 217 aa20.94■□□□□ 0.94
YIPF3-205ENST00000460547 PALLDQ8WX93 1383 aa20.94■□□□□ 0.94
YIPF3-205ENST00000460547 MFAP1P55081 439 aaKnown RBP20.93■□□□□ 0.94
YIPF3-205ENST00000460547 TTC22Q5TAA0 569 aa20.93■□□□□ 0.94
YIPF3-205ENST00000460547 IBTKQ9P2D0 1353 aaPredicted RBP20.93■□□□□ 0.94
YIPF3-205ENST00000460547 UBTFL1P0CB47 393 aaPredicted RBP20.93■□□□□ 0.94
YIPF3-205ENST00000460547 BEND3Q5T5X7 828 aa20.93■□□□□ 0.94
YIPF3-205ENST00000460547 ZNF790Q6PG37 636 aa20.93■□□□□ 0.94
YIPF3-205ENST00000460547 GSPT1P15170 499 aaKnown RBP20.92■□□□□ 0.94
YIPF3-205ENST00000460547 HYPKQ9NX55 129 aa20.92■□□□□ 0.94
YIPF3-205ENST00000460547 C5P01031 1676 aa20.91■□□□□ 0.94
YIPF3-205ENST00000460547 CDC45O75419 566 aa20.91■□□□□ 0.94
YIPF3-205ENST00000460547 RBM25P49756 843 aaKnown RBP20.91■□□□□ 0.94
YIPF3-205ENST00000460547 LRRFIP2Q9Y608 721 aaKnown RBP20.91■□□□□ 0.94
YIPF3-205ENST00000460547 PI4KAP2A4QPH2 592 aa20.9■□□□□ 0.94
YIPF3-205ENST00000460547 ZNF827Q17R98 1081 aa20.9■□□□□ 0.94
YIPF3-205ENST00000460547 PI4KAP1Q8N8J0 262 aa20.9■□□□□ 0.94
YIPF3-205ENST00000460547 OSBPL3Q9H4L5 887 aa20.9■□□□□ 0.94
YIPF3-205ENST00000460547 SPON1Q9HCB6 807 aa20.9■□□□□ 0.94
YIPF3-205ENST00000460547 DDX21Q9NR30 783 aaKnown RBP eCLIP20.9■□□□□ 0.94
YIPF3-205ENST00000460547 TFCP2L1Q9NZI6 479 aa20.9■□□□□ 0.94
YIPF3-205ENST00000460547 ASAP1Q9ULH1 1129 aa20.9■□□□□ 0.94
YIPF3-205ENST00000460547 SLC4A3P48751 1232 aa20.89■□□□□ 0.94
YIPF3-205ENST00000460547 TBC1D9Q6ZT07 1266 aa20.89■□□□□ 0.94
YIPF3-205ENST00000460547 AKT1S1Q96B36 256 aa20.89■□□□□ 0.94
YIPF3-205ENST00000460547 ALDH1L1O75891 902 aa20.89■□□□□ 0.93
YIPF3-205ENST00000460547 NFATC2IPQ8NCF5 419 aa20.89■□□□□ 0.93
YIPF3-205ENST00000460547 SSH3Q8TE77 659 aa20.89■□□□□ 0.93
YIPF3-205ENST00000460547 ATG3Q9NT62 314 aa20.89■□□□□ 0.93
YIPF3-205ENST00000460547 TOGARAM1Q9Y4F4 1720 aa20.88■□□□□ 0.93
YIPF3-205ENST00000460547 PNMA6EA0A0J9YXQ4 647 aa20.88■□□□□ 0.93
YIPF3-205ENST00000460547 KSR2Q6VAB6 950 aa20.88■□□□□ 0.93
YIPF3-205ENST00000460547 PDGFDQ9GZP0 370 aaPredicted RBP20.88■□□□□ 0.93
YIPF3-205ENST00000460547 LOC102724428A0A0B4J2F2 783 aa20.87■□□□□ 0.93
YIPF3-205ENST00000460547 SIK1P57059 783 aa20.87■□□□□ 0.93
YIPF3-205ENST00000460547 POLA2Q14181 598 aa20.87■□□□□ 0.93
YIPF3-205ENST00000460547 C16orf71Q8IYS4 520 aaPredicted RBP20.87■□□□□ 0.93
YIPF3-205ENST00000460547 SALL3Q9BXA9 1300 aa20.87■□□□□ 0.93
YIPF3-205ENST00000460547 SMARCA5O60264 1052 aaPredicted RBP20.86■□□□□ 0.93
YIPF3-205ENST00000460547 PROSER3Q2NL68 480 aa20.86■□□□□ 0.93
YIPF3-205ENST00000460547 OTUD7AQ8TE49 926 aaPredicted RBP20.86■□□□□ 0.93
YIPF3-205ENST00000460547 ITGB4P16144 1822 aa20.86■□□□□ 0.93
YIPF3-205ENST00000460547 ZBTB7AO95365 584 aa20.86■□□□□ 0.93
YIPF3-205ENST00000460547 ANXA1P04083 346 aa20.86■□□□□ 0.93
YIPF3-205ENST00000460547 ATP6V1AP38606 617 aa20.86■□□□□ 0.93
YIPF3-205ENST00000460547 PDIA6Q15084 440 aa20.86■□□□□ 0.93
YIPF3-205ENST00000460547 LRRCC1Q9C099 1032 aa20.86■□□□□ 0.93
YIPF3-205ENST00000460547 SRCAPQ6ZRS2 3230 aa20.85■□□□□ 0.93
YIPF3-205ENST00000460547 PRAMEF22A3QJZ6 481 aa20.85■□□□□ 0.93
YIPF3-205ENST00000460547 DDX58O95786 925 aaKnown RBP20.85■□□□□ 0.93
YIPF3-205ENST00000460547 RBM42Q9BTD8 480 aaKnown RBP20.85■□□□□ 0.93
YIPF3-205ENST00000460547 LAMB4A4D0S4 1761 aa20.85■□□□□ 0.93
YIPF3-205ENST00000460547 LY75O60449 1722 aa20.85■□□□□ 0.93
YIPF3-205ENST00000460547 MTX1Q13505 466 aa20.84■□□□□ 0.93
YIPF3-205ENST00000460547 HDAC5Q9UQL6 1122 aa20.84■□□□□ 0.93
YIPF3-205ENST00000460547 EXOC6BQ9Y2D4 811 aa20.84■□□□□ 0.93
YIPF3-205ENST00000460547 MAP3K2Q9Y2U5 619 aa20.84■□□□□ 0.93
YIPF3-205ENST00000460547 SLC39A6Q13433 755 aa20.83■□□□□ 0.93
YIPF3-205ENST00000460547 TBC1D2Q9BYX2 928 aa20.83■□□□□ 0.93
YIPF3-205ENST00000460547 PPP1R1BQ9UD71 204 aaPredicted RBP20.83■□□□□ 0.93
YIPF3-205ENST00000460547 ATF5Q9Y2D1 282 aaPredicted RBP20.83■□□□□ 0.93
YIPF3-205ENST00000460547 RAB11FIP3O75154 756 aa20.83■□□□□ 0.92
YIPF3-205ENST00000460547 SNRPA1P09661 255 aaKnown RBP20.83■□□□□ 0.92
YIPF3-205ENST00000460547 PDE1AP54750 535 aa20.83■□□□□ 0.92
YIPF3-205ENST00000460547 NBR1Q14596 966 aa20.83■□□□□ 0.92
YIPF3-205ENST00000460547 TTC5Q8N0Z6 440 aa20.83■□□□□ 0.92
YIPF3-205ENST00000460547 ZNF496Q96IT1 587 aaPredicted RBP20.83■□□□□ 0.92
YIPF3-205ENST00000460547 MTFR1LQ9H019 292 aa20.83■□□□□ 0.92
YIPF3-205ENST00000460547 PAPPAQ13219 1627 aa20.83■□□□□ 0.92
YIPF3-205ENST00000460547 APBB1O00213 710 aa20.82■□□□□ 0.92
YIPF3-205ENST00000460547 NBPF7P0C2Y1 421 aaPredicted RBP20.82■□□□□ 0.92
YIPF3-205ENST00000460547 LINS1Q8NG48 757 aa20.82■□□□□ 0.92
YIPF3-205ENST00000460547 AK7Q96M32 723 aa20.82■□□□□ 0.92
YIPF3-205ENST00000460547 FMNL2Q96PY5 1086 aa20.82■□□□□ 0.92
YIPF3-205ENST00000460547 UTYO14607 1347 aa20.82■□□□□ 0.92
YIPF3-205ENST00000460547 AOX1Q06278 1338 aa20.82■□□□□ 0.92
YIPF3-205ENST00000460547 SDSP20132 328 aa20.81■□□□□ 0.92
YIPF3-205ENST00000460547 SLC16A10Q8TF71 515 aa20.81■□□□□ 0.92
YIPF3-205ENST00000460547 UBR2Q8IWV8 1755 aa20.81■□□□□ 0.92
YIPF3-205ENST00000460547 PNPLA7Q6ZV29 1317 aa20.81■□□□□ 0.92
YIPF3-205ENST00000460547 TUBGCP6Q96RT7 1819 aa20.81■□□□□ 0.92
YIPF3-205ENST00000460547 LRP5O75197 1615 aa20.81■□□□□ 0.92
YIPF3-205ENST00000460547 PPP1R42Q7Z4L9 355 aa20.8■□□□□ 0.92
YIPF3-205ENST00000460547 STAP2Q9UGK3 403 aa20.8■□□□□ 0.92
YIPF3-205ENST00000460547 PTCD1O75127 700 aaKnown RBP20.8■□□□□ 0.92
YIPF3-205ENST00000460547 RTL5Q5HYW3 569 aaPredicted RBP20.8■□□□□ 0.92
YIPF3-205ENST00000460547 FLAD1Q8NFF5 587 aa20.8■□□□□ 0.92
YIPF3-205ENST00000460547 LRP10Q7Z4F1 713 aa20.79■□□□□ 0.92
YIPF3-205ENST00000460547 ERBB4Q15303 1308 aa20.79■□□□□ 0.92
YIPF3-205ENST00000460547 MX1P20591 662 aa20.78■□□□□ 0.92
YIPF3-205ENST00000460547 ITPK1Q13572 414 aa20.78■□□□□ 0.92
YIPF3-205ENST00000460547 HSP90AB4PQ58FF6 505 aa20.78■□□□□ 0.92
YIPF3-205ENST00000460547 CASC1Q6TDU7 716 aa20.78■□□□□ 0.92
YIPF3-205ENST00000460547 LINC00116Q8NCU8 138 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms