RNA–Protein interactions for RNA: ENST00000458649.6

AMBRA1-202, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 2 BASIC

Gene AMBRA1, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-202ENST00000458649 FLT4P35916 1363 aa12.56□□□□□ -0.4
AMBRA1-202ENST00000458649 LETM1O95202 739 aaPredicted RBP12.56□□□□□ -0.4
AMBRA1-202ENST00000458649 MAP4K4O95819 1239 aaPredicted RBP12.56□□□□□ -0.4
AMBRA1-202ENST00000458649 GPTP24298 496 aa12.56□□□□□ -0.4
AMBRA1-202ENST00000458649 PDCL2Q8N4E4 241 aa12.56□□□□□ -0.4
AMBRA1-202ENST00000458649 ZNF219Q9P2Y4 722 aaPredicted RBP12.56□□□□□ -0.4
AMBRA1-202ENST00000458649 NPATQ14207 1427 aa12.56□□□□□ -0.4
AMBRA1-202ENST00000458649 UQCRFS1P1P0C7P4 283 aa12.56□□□□□ -0.4
AMBRA1-202ENST00000458649 DACH1Q9UI36 760 aa12.56□□□□□ -0.4
AMBRA1-202ENST00000458649 ABCC1P33527 1531 aa12.55□□□□□ -0.4
AMBRA1-202ENST00000458649 DESP17661 470 aa12.55□□□□□ -0.4
AMBRA1-202ENST00000458649 MX1P20591 662 aa12.55□□□□□ -0.4
AMBRA1-202ENST00000458649 PLCD4Q9BRC7 762 aa12.55□□□□□ -0.4
AMBRA1-202ENST00000458649 CALCOCO1Q9P1Z2 691 aa12.55□□□□□ -0.4
AMBRA1-202ENST00000458649 PLEKHH1Q9ULM0 1364 aa12.55□□□□□ -0.4
AMBRA1-202ENST00000458649 PCDH11XQ9BZA7 1347 aa12.55□□□□□ -0.4
AMBRA1-202ENST00000458649 PCDH11YQ9BZA8 1340 aa12.55□□□□□ -0.4
AMBRA1-202ENST00000458649 IGHDP01880 384 aa12.55□□□□□ -0.4
AMBRA1-202ENST00000458649 TPTE2Q6XPS3 522 aa12.55□□□□□ -0.4
AMBRA1-202ENST00000458649 LDHAL6AQ6ZMR3 332 aa12.55□□□□□ -0.4
AMBRA1-202ENST00000458649 FEZ1Q99689 392 aa12.55□□□□□ -0.4
AMBRA1-202ENST00000458649 ZRANB1Q9UGI0 708 aa12.55□□□□□ -0.4
AMBRA1-202ENST00000458649 JDP2Q8WYK2 163 aa12.55□□□□□ -0.4
AMBRA1-202ENST00000458649 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.55□□□□□ -0.4
AMBRA1-202ENST00000458649 ANKRD18AQ8IVF6 992 aa12.55□□□□□ -0.4
AMBRA1-202ENST00000458649 CFAP74Q9C0B2 1584 aa12.55□□□□□ -0.4
AMBRA1-202ENST00000458649 EIF4A2Q14240 407 aaKnown RBP12.54□□□□□ -0.4
AMBRA1-202ENST00000458649 EYA3Q99504 573 aa12.54□□□□□ -0.4
AMBRA1-202ENST00000458649 SMARCA5O60264 1052 aaPredicted RBP12.54□□□□□ -0.4
AMBRA1-202ENST00000458649 MBD3O95983 291 aa12.54□□□□□ -0.4
AMBRA1-202ENST00000458649 ZFYVE27Q5T4F4 411 aa12.54□□□□□ -0.4
AMBRA1-202ENST00000458649 CTCFLQ8NI51 663 aaPredicted RBP12.54□□□□□ -0.4
AMBRA1-202ENST00000458649 NUTM1Q86Y26 1132 aa12.54□□□□□ -0.4
AMBRA1-202ENST00000458649 BAG6P46379 1132 aa12.54□□□□□ -0.4
AMBRA1-202ENST00000458649 GIMAP7Q8NHV1 300 aa12.54□□□□□ -0.4
AMBRA1-202ENST00000458649 ZFYVE9O95405 1425 aa12.53□□□□□ -0.4
AMBRA1-202ENST00000458649 SPATA31E1Q6ZUB1 1445 aa12.53□□□□□ -0.4
AMBRA1-202ENST00000458649 CIZ1Q9ULV3 898 aaPredicted RBP12.53□□□□□ -0.4
AMBRA1-202ENST00000458649 MYO5CQ9NQX4 1742 aa12.53□□□□□ -0.4
AMBRA1-202ENST00000458649 KIAA0754O94854 1291 aa12.53□□□□□ -0.4
AMBRA1-202ENST00000458649 WDR78Q5VTH9 848 aa12.53□□□□□ -0.4
AMBRA1-202ENST00000458649 CGNQ9P2M7 1197 aaKnown RBP12.53□□□□□ -0.4
AMBRA1-202ENST00000458649 CEP131Q9UPN4 1083 aa12.53□□□□□ -0.4
AMBRA1-202ENST00000458649 DHX8Q14562 1220 aaKnown RBP12.53□□□□□ -0.4
AMBRA1-202ENST00000458649 LRRFIP2Q9Y608 721 aaKnown RBP12.53□□□□□ -0.4
AMBRA1-202ENST00000458649 HMGB1P09429 215 aaKnown RBP12.53□□□□□ -0.4
AMBRA1-202ENST00000458649 NAP1L1P55209 391 aaKnown RBP12.53□□□□□ -0.4
AMBRA1-202ENST00000458649 CWC27Q6UX04 472 aaKnown RBP12.53□□□□□ -0.4
AMBRA1-202ENST00000458649 ACSBG1Q96GR2 724 aa12.53□□□□□ -0.4
AMBRA1-202ENST00000458649 DCAF5Q96JK2 942 aa12.53□□□□□ -0.4
AMBRA1-202ENST00000458649 LUC7LQ9NQ29 371 aaKnown RBP12.53□□□□□ -0.4
AMBRA1-202ENST00000458649 ANKRD13DQ6ZTN6 518 aa12.52□□□□□ -0.4
AMBRA1-202ENST00000458649 DYDC1Q8WWB3 177 aa12.52□□□□□ -0.4
AMBRA1-202ENST00000458649 TXLNBQ8N3L3 684 aa12.52□□□□□ -0.4
AMBRA1-202ENST00000458649 SPINK5Q9NQ38 1064 aaPredicted RBP12.52□□□□□ -0.4
AMBRA1-202ENST00000458649 HDAC1Q13547 482 aaPredicted RBP12.52□□□□□ -0.41
AMBRA1-202ENST00000458649 SMARCE1Q969G3 411 aa12.52□□□□□ -0.41
AMBRA1-202ENST00000458649 GCP02774 474 aa12.52□□□□□ -0.41
AMBRA1-202ENST00000458649 NEFHP12036 1026 aa12.52□□□□□ -0.41
AMBRA1-202ENST00000458649 CCDC96Q2M329 555 aa12.52□□□□□ -0.41
AMBRA1-202ENST00000458649 CCDC178Q5BJE1 867 aa12.52□□□□□ -0.41
AMBRA1-202ENST00000458649 CLEC11AQ9Y240 323 aa12.52□□□□□ -0.41
AMBRA1-202ENST00000458649 LMOD1P29536 600 aaPredicted RBP12.52□□□□□ -0.41
AMBRA1-202ENST00000458649 ZFYVE16Q7Z3T8 1539 aa12.51□□□□□ -0.41
AMBRA1-202ENST00000458649 PRPF40AO75400 957 aaKnown RBP12.51□□□□□ -0.41
AMBRA1-202ENST00000458649 RAB34Q9BZG1 259 aa12.51□□□□□ -0.41
AMBRA1-202ENST00000458649 PCDHB15Q9Y5E8 787 aa12.51□□□□□ -0.41
AMBRA1-202ENST00000458649 MINDY4BA8MYZ0 360 aa12.51□□□□□ -0.41
AMBRA1-202ENST00000458649 PDE4BQ07343 736 aa12.51□□□□□ -0.41
AMBRA1-202ENST00000458649 CCDC12Q8WUD4 166 aaPredicted RBP12.51□□□□□ -0.41
AMBRA1-202ENST00000458649 MAP3K2Q9Y2U5 619 aa12.51□□□□□ -0.41
AMBRA1-202ENST00000458649 KDM6BO15054 1643 aa12.51□□□□□ -0.41
AMBRA1-202ENST00000458649 PRDM10Q9NQV6 1147 aa12.51□□□□□ -0.41
AMBRA1-202ENST00000458649 SAMD9LQ8IVG5 1584 aa12.51□□□□□ -0.41
AMBRA1-202ENST00000458649 BMP2KLQ5H9B9 411 aa12.51□□□□□ -0.41
AMBRA1-202ENST00000458649 ZNF804AQ7Z570 1209 aa12.51□□□□□ -0.41
AMBRA1-202ENST00000458649 UTP14AQ9BVJ6 771 aaKnown RBP12.51□□□□□ -0.41
AMBRA1-202ENST00000458649 ZHX1Q9UKY1 873 aaPredicted RBP12.51□□□□□ -0.41
AMBRA1-202ENST00000458649 MYO6Q9UM54 1294 aa12.51□□□□□ -0.41
AMBRA1-202ENST00000458649 ERICH4A6NGS2 130 aa12.5□□□□□ -0.41
AMBRA1-202ENST00000458649 CAVIN1Q6NZI2 390 aaKnown RBP12.5□□□□□ -0.41
AMBRA1-202ENST00000458649 BTG4Q9NY30 223 aa12.5□□□□□ -0.41
AMBRA1-202ENST00000458649 C8orf58Q8NAV2 365 aa12.5□□□□□ -0.41
AMBRA1-202ENST00000458649 SCLT1Q96NL6 688 aa12.5□□□□□ -0.41
AMBRA1-202ENST00000458649 ZHX3Q9H4I2 956 aa12.5□□□□□ -0.41
AMBRA1-202ENST00000458649 CCDC112Q8NEF3 446 aa12.5□□□□□ -0.41
AMBRA1-202ENST00000458649 WDR33Q9C0J8 1336 aaKnown RBP12.5□□□□□ -0.41
AMBRA1-202ENST00000458649 KDM4AO75164 1064 aa12.5□□□□□ -0.41
AMBRA1-202ENST00000458649 RNF214Q8ND24 703 aa12.5□□□□□ -0.41
AMBRA1-202ENST00000458649 PHAXQ9H814 394 aaKnown RBP12.5□□□□□ -0.41
AMBRA1-202ENST00000458649 GRPEL1Q9HAV7 217 aa12.5□□□□□ -0.41
AMBRA1-202ENST00000458649 PDRG1Q9NUG6 133 aa12.5□□□□□ -0.41
AMBRA1-202ENST00000458649 IRX3P78415 501 aaPredicted RBP12.49□□□□□ -0.41
AMBRA1-202ENST00000458649 CRNKL1Q9BZJ0 848 aaKnown RBP12.49□□□□□ -0.41
AMBRA1-202ENST00000458649 NIP7Q9Y221 180 aaKnown RBP eCLIP12.49□□□□□ -0.41
AMBRA1-202ENST00000458649 B4DLN1 442 aa12.49□□□□□ -0.41
AMBRA1-202ENST00000458649 MRPL12P52815 198 aaKnown RBP12.49□□□□□ -0.41
AMBRA1-202ENST00000458649 TRAPPC3LQ5T215 181 aa12.49□□□□□ -0.41
AMBRA1-202ENST00000458649 MRPL50Q8N5N7 158 aaKnown RBP12.49□□□□□ -0.41
AMBRA1-202ENST00000458649 PHACTR3Q96KR7 559 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms