RNA–Protein interactions for RNA: ENST00000458640.5

DDX39B-214, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-214ENST00000458640 CHL1O00533 1208 aa13.6□□□□□ -0.23
DDX39B-214ENST00000458640 CYP2C19P33261 490 aa13.6□□□□□ -0.23
DDX39B-214ENST00000458640 BRPF1P55201 1214 aaPredicted RBP13.6□□□□□ -0.23
DDX39B-214ENST00000458640 NCBP1Q09161 790 aaKnown RBP13.6□□□□□ -0.23
DDX39B-214ENST00000458640 SMTNL1A8MU46 457 aa13.59□□□□□ -0.23
DDX39B-214ENST00000458640 GTF2A1P52655 376 aaPredicted RBP13.59□□□□□ -0.23
DDX39B-214ENST00000458640 HDAC1Q13547 482 aaPredicted RBP13.59□□□□□ -0.23
DDX39B-214ENST00000458640 PLEKHO1Q53GL0 409 aaPredicted RBP13.59□□□□□ -0.23
DDX39B-214ENST00000458640 KIAA1524Q8TCG1 905 aa13.59□□□□□ -0.23
DDX39B-214ENST00000458640 LRRC59Q96AG4 307 aaKnown RBP13.59□□□□□ -0.23
DDX39B-214ENST00000458640 PAXBP1Q9Y5B6 917 aa13.59□□□□□ -0.23
DDX39B-214ENST00000458640 PCDHB15Q9Y5E8 787 aa13.59□□□□□ -0.23
DDX39B-214ENST00000458640 BABAM1Q9NWV8 329 aa13.59□□□□□ -0.23
DDX39B-214ENST00000458640 LTBP4Q8N2S1 1624 aa13.59□□□□□ -0.23
DDX39B-214ENST00000458640 VAMP4O75379 141 aa13.58□□□□□ -0.24
DDX39B-214ENST00000458640 SLFNL1Q499Z3 407 aa13.58□□□□□ -0.24
DDX39B-214ENST00000458640 GRIPAP1Q4V328 841 aa13.58□□□□□ -0.24
DDX39B-214ENST00000458640 ICE2Q659A1 982 aa13.58□□□□□ -0.24
DDX39B-214ENST00000458640 ATF7IPQ6VMQ6 1270 aa13.58□□□□□ -0.24
DDX39B-214ENST00000458640 DZIP1LQ8IYY4 767 aaKnown RBP13.58□□□□□ -0.24
DDX39B-214ENST00000458640 ZNF397Q8NF99 534 aaPredicted RBP13.58□□□□□ -0.24
DDX39B-214ENST00000458640 JARID2Q92833 1246 aaPredicted RBP13.58□□□□□ -0.24
DDX39B-214ENST00000458640 AXIN2Q9Y2T1 843 aa13.58□□□□□ -0.24
DDX39B-214ENST00000458640 ROBO1Q9Y6N7 1651 aa13.58□□□□□ -0.24
DDX39B-214ENST00000458640 OVOS2A0A0G2JMS6 1433 aa13.58□□□□□ -0.24
DDX39B-214ENST00000458640 RNF20Q5VTR2 975 aa13.57□□□□□ -0.24
DDX39B-214ENST00000458640 CERS3Q8IU89 383 aa13.57□□□□□ -0.24
DDX39B-214ENST00000458640 CABLES1Q8TDN4 633 aa13.57□□□□□ -0.24
DDX39B-214ENST00000458640 PANK1Q8TE04 598 aa13.57□□□□□ -0.24
DDX39B-214ENST00000458640 TSPYL4Q9UJ04 414 aa13.57□□□□□ -0.24
DDX39B-214ENST00000458640 AHDC1Q5TGY3 1603 aaPredicted RBP13.57□□□□□ -0.24
DDX39B-214ENST00000458640 KIF2CQ99661 725 aa13.57□□□□□ -0.24
DDX39B-214ENST00000458640 CSB-PGBD3P0DP91 1061 aa13.56□□□□□ -0.24
DDX39B-214ENST00000458640 AKAP4Q5JQC9 854 aa13.56□□□□□ -0.24
DDX39B-214ENST00000458640 C1orf141Q5JVX7 400 aa13.56□□□□□ -0.24
DDX39B-214ENST00000458640 GPT2Q8TD30 523 aa13.56□□□□□ -0.24
DDX39B-214ENST00000458640 CARD10Q9BWT7 1032 aa13.56□□□□□ -0.24
DDX39B-214ENST00000458640 USP25Q9UHP3 1055 aa13.56□□□□□ -0.24
DDX39B-214ENST00000458640 SOS1Q07889 1333 aaPredicted RBP13.56□□□□□ -0.24
DDX39B-214ENST00000458640 SYCE3A1L190 88 aa13.56□□□□□ -0.24
DDX39B-214ENST00000458640 DHX16O60231 1041 aaKnown RBP13.56□□□□□ -0.24
DDX39B-214ENST00000458640 GUCY2CP25092 1073 aa13.56□□□□□ -0.24
DDX39B-214ENST00000458640 RAD51AP2Q09MP3 1159 aa13.56□□□□□ -0.24
DDX39B-214ENST00000458640 ZNF530Q6P9A1 599 aaPredicted RBP13.56□□□□□ -0.24
DDX39B-214ENST00000458640 CNPY4Q8N129 248 aa13.56□□□□□ -0.24
DDX39B-214ENST00000458640 TXLNBQ8N3L3 684 aa13.56□□□□□ -0.24
DDX39B-214ENST00000458640 GOLGA6L1Q8N7Z2 621 aa13.56□□□□□ -0.24
DDX39B-214ENST00000458640 RAPGEF4Q8WZA2 1011 aa13.56□□□□□ -0.24
DDX39B-214ENST00000458640 ARHGAP45Q92619 1136 aa13.56□□□□□ -0.24
DDX39B-214ENST00000458640 PRDM11Q9NQV5 511 aa13.56□□□□□ -0.24
DDX39B-214ENST00000458640 TMEM63CQ9P1W3 806 aa13.56□□□□□ -0.24
DDX39B-214ENST00000458640 CEMIPQ8WUJ3 1361 aa13.55□□□□□ -0.24
DDX39B-214ENST00000458640 TRIM27P14373 513 aa13.55□□□□□ -0.24
DDX39B-214ENST00000458640 MVPQ14764 893 aaKnown RBP13.55□□□□□ -0.24
DDX39B-214ENST00000458640 RABEP1Q15276 862 aa13.55□□□□□ -0.24
DDX39B-214ENST00000458640 TSPYL6Q8N831 410 aa13.55□□□□□ -0.24
DDX39B-214ENST00000458640 C8orf58Q8NAV2 365 aa13.55□□□□□ -0.24
DDX39B-214ENST00000458640 KIF1BPQ96EK5 621 aa13.55□□□□□ -0.24
DDX39B-214ENST00000458640 NLRP2Q9NX02 1062 aa13.55□□□□□ -0.24
DDX39B-214ENST00000458640 RSPH14Q9UHP6 348 aa13.55□□□□□ -0.24
DDX39B-214ENST00000458640 NOB1Q9ULX3 412 aaKnown RBP13.55□□□□□ -0.24
DDX39B-214ENST00000458640 HNRNPH2P55795 449 aaKnown RBP13.54□□□□□ -0.24
DDX39B-214ENST00000458640 DDX19BQ9UMR2 479 aa13.54□□□□□ -0.24
DDX39B-214ENST00000458640 CEP83Q9Y592 693 aa13.54□□□□□ -0.24
DDX39B-214ENST00000458640 ELL2O00472 640 aaPredicted RBP13.54□□□□□ -0.24
DDX39B-214ENST00000458640 KIF1CO43896 1103 aaKnown RBP13.54□□□□□ -0.24
DDX39B-214ENST00000458640 PRPF40AO75400 957 aaKnown RBP13.54□□□□□ -0.24
DDX39B-214ENST00000458640 BMP2KLQ5H9B9 411 aa13.54□□□□□ -0.24
DDX39B-214ENST00000458640 CWC15Q9P013 229 aaKnown RBP13.54□□□□□ -0.24
DDX39B-214ENST00000458640 PARP4Q9UKK3 1724 aaKnown RBP13.53□□□□□ -0.24
DDX39B-214ENST00000458640 RLBP1P12271 317 aa13.53□□□□□ -0.24
DDX39B-214ENST00000458640 CASQ1P31415 396 aa13.53□□□□□ -0.24
DDX39B-214ENST00000458640 MAPK8IP2Q13387 824 aaPredicted RBP13.53□□□□□ -0.24
DDX39B-214ENST00000458640 TAF7Q15545 349 aaPredicted RBP13.53□□□□□ -0.24
DDX39B-214ENST00000458640 TEX35Q5T0J7 233 aa13.53□□□□□ -0.24
DDX39B-214ENST00000458640 MRPL50Q8N5N7 158 aaKnown RBP13.53□□□□□ -0.24
DDX39B-214ENST00000458640 KCNG1Q9UIX4 513 aa13.53□□□□□ -0.24
DDX39B-214ENST00000458640 KDM3BQ7LBC6 1761 aa13.53□□□□□ -0.24
DDX39B-214ENST00000458640 MYCNP04198 464 aaPredicted RBP13.52□□□□□ -0.24
DDX39B-214ENST00000458640 CCDC172P0C7W6 258 aa13.52□□□□□ -0.24
DDX39B-214ENST00000458640 TATP17735 454 aaPredicted RBP13.52□□□□□ -0.24
DDX39B-214ENST00000458640 MCCP23508 829 aa13.52□□□□□ -0.24
DDX39B-214ENST00000458640 CHRNA2Q15822 529 aa13.52□□□□□ -0.24
DDX39B-214ENST00000458640 MNS1Q8NEH6 495 aa13.52□□□□□ -0.24
DDX39B-214ENST00000458640 IL17REQ8NFR9 667 aa13.52□□□□□ -0.24
DDX39B-214ENST00000458640 NOL10Q9BSC4 688 aaKnown RBP13.52□□□□□ -0.24
DDX39B-214ENST00000458640 API5Q9BZZ5 524 aaKnown RBP13.52□□□□□ -0.24
DDX39B-214ENST00000458640 PKD1L3Q7Z443 1732 aa13.52□□□□□ -0.24
DDX39B-214ENST00000458640 COL22A1Q8NFW1 1626 aaPredicted RBP13.52□□□□□ -0.24
DDX39B-214ENST00000458640 ADAMTS7Q9UKP4 1686 aa13.52□□□□□ -0.25
DDX39B-214ENST00000458640 BMS1Q14692 1282 aaKnown RBP13.52□□□□□ -0.25
DDX39B-214ENST00000458640 BANK1Q8NDB2 785 aa13.52□□□□□ -0.25
DDX39B-214ENST00000458640 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.52□□□□□ -0.256e-20■□□□□ 9.3
DDX39B-214ENST00000458640 LOC102724159A0A0B4J2E5 919 aa13.51□□□□□ -0.25
DDX39B-214ENST00000458640 TEFQ10587 303 aa13.51□□□□□ -0.25
DDX39B-214ENST00000458640 PWP2Q15269 919 aaKnown RBP13.51□□□□□ -0.25
DDX39B-214ENST00000458640 ITPRIPQ8IWB1 547 aa13.51□□□□□ -0.25
DDX39B-214ENST00000458640 SPG7Q9UQ90 795 aa13.51□□□□□ -0.25
DDX39B-214ENST00000458640 WDR17Q8IZU2 1322 aa13.51□□□□□ -0.25
DDX39B-214ENST00000458640 COL5A2P05997 1499 aaPredicted RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms