RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 DDNO94850 711 aaPredicted RBP20.91■□□□□ 0.94
CHCHD3-204ENST00000457942 EIF5P55010 431 aaKnown RBP20.91■□□□□ 0.94
CHCHD3-204ENST00000457942 DCTN1Q14203 1278 aa20.91■□□□□ 0.94
CHCHD3-204ENST00000457942 DICER1Q9UPY3 1922 aaKnown RBP20.91■□□□□ 0.94
CHCHD3-204ENST00000457942 NPHP1O15259 732 aa20.9■□□□□ 0.94
CHCHD3-204ENST00000457942 PRR5LQ6MZQ0 368 aa20.9■□□□□ 0.94
CHCHD3-204ENST00000457942 TAOK3Q9H2K8 898 aa20.9■□□□□ 0.94
CHCHD3-204ENST00000457942 CREBZFQ9NS37 354 aa20.9■□□□□ 0.94
CHCHD3-204ENST00000457942 TBC1D2BQ9UPU7 963 aa20.9■□□□□ 0.94
CHCHD3-204ENST00000457942 DLG5Q8TDM6 1919 aa20.89■□□□□ 0.93
CHCHD3-204ENST00000457942 IL6STP40189 918 aaPredicted RBP20.89■□□□□ 0.93
CHCHD3-204ENST00000457942 A1BGP04217 495 aa20.88■□□□□ 0.93
CHCHD3-204ENST00000457942 HTATSF1O43719 755 aaKnown RBP20.87■□□□□ 0.93
CHCHD3-204ENST00000457942 PDE6BP35913 854 aa20.87■□□□□ 0.93
CHCHD3-204ENST00000457942 SLX4Q8IY92 1834 aa20.87■□□□□ 0.93
CHCHD3-204ENST00000457942 CNTNAP1P78357 1384 aa20.86■□□□□ 0.93
CHCHD3-204ENST00000457942 MAPK8IP3Q9UPT6 1336 aa20.86■□□□□ 0.93
CHCHD3-204ENST00000457942 PRPF40BQ6NWY9 871 aaKnown RBP20.86■□□□□ 0.93
CHCHD3-204ENST00000457942 BRIP1Q9BX63 1249 aa20.86■□□□□ 0.93
CHCHD3-204ENST00000457942 BCORQ6W2J9 1755 aa20.85■□□□□ 0.93
CHCHD3-204ENST00000457942 SNRPA1P09661 255 aaKnown RBP20.85■□□□□ 0.93
CHCHD3-204ENST00000457942 PIP4K2AP48426 406 aaPredicted RBP20.85■□□□□ 0.93
CHCHD3-204ENST00000457942 CNBD1Q8NA66 436 aa20.85■□□□□ 0.93
CHCHD3-204ENST00000457942 ARFGEF2Q9Y6D5 1785 aa20.85■□□□□ 0.93
CHCHD3-204ENST00000457942 PRAMEF22A3QJZ6 481 aa20.84■□□□□ 0.93
CHCHD3-204ENST00000457942 EAPPQ56P03 285 aaPredicted RBP20.84■□□□□ 0.93
CHCHD3-204ENST00000457942 DZIP3Q86Y13 1208 aaKnown RBP20.84■□□□□ 0.93
CHCHD3-204ENST00000457942 USP16Q9Y5T5 823 aa20.84■□□□□ 0.93
CHCHD3-204ENST00000457942 TAF7Q15545 349 aaPredicted RBP20.83■□□□□ 0.93
CHCHD3-204ENST00000457942 AIDAQ96BJ3 306 aa20.83■□□□□ 0.93
CHCHD3-204ENST00000457942 PNNQ9H307 717 aaKnown RBP20.83■□□□□ 0.93
CHCHD3-204ENST00000457942 LAMB4A4D0S4 1761 aa20.82■□□□□ 0.92
CHCHD3-204ENST00000457942 LTBP3Q9NS15 1303 aa20.82■□□□□ 0.92
CHCHD3-204ENST00000457942 ST5P78524 1137 aa20.82■□□□□ 0.92
CHCHD3-204ENST00000457942 MIS18AQ9NYP9 233 aa20.82■□□□□ 0.92
CHCHD3-204ENST00000457942 ZNF541Q9H0D2 1346 aa20.81■□□□□ 0.92
CHCHD3-204ENST00000457942 CAMTA2O94983 1202 aa20.81■□□□□ 0.92
CHCHD3-204ENST00000457942 VEGFBP49765 207 aa20.81■□□□□ 0.92
CHCHD3-204ENST00000457942 SETDB2Q96T68 719 aa20.81■□□□□ 0.92
CHCHD3-204ENST00000457942 PASKQ96RG2 1323 aa20.8■□□□□ 0.92
CHCHD3-204ENST00000457942 KDM3BQ7LBC6 1761 aa20.8■□□□□ 0.92
CHCHD3-204ENST00000457942 RALBP1Q15311 655 aa20.8■□□□□ 0.92
CHCHD3-204ENST00000457942 NFE2L2Q16236 605 aa20.8■□□□□ 0.92
CHCHD3-204ENST00000457942 LDHDQ86WU2 507 aa20.8■□□□□ 0.92
CHCHD3-204ENST00000457942 CNKSR1Q969H4 720 aa20.8■□□□□ 0.92
CHCHD3-204ENST00000457942 TAF1DQ9H5J8 278 aaPredicted RBP20.8■□□□□ 0.92
CHCHD3-204ENST00000457942 SRGNP10124 158 aa20.79■□□□□ 0.92
CHCHD3-204ENST00000457942 DDX10Q13206 875 aaKnown RBP20.79■□□□□ 0.92
CHCHD3-204ENST00000457942 OLFM4Q6UX06 510 aa20.79■□□□□ 0.92
CHCHD3-204ENST00000457942 PNISRQ8TF01 805 aaKnown RBP20.79■□□□□ 0.92
CHCHD3-204ENST00000457942 PDZRN3Q9UPQ7 1066 aa20.79■□□□□ 0.92
CHCHD3-204ENST00000457942 CLEC11AQ9Y240 323 aa20.79■□□□□ 0.92
CHCHD3-204ENST00000457942 ZNF652Q9Y2D9 606 aa20.79■□□□□ 0.92
CHCHD3-204ENST00000457942 IQCA1LA6NCM1 817 aa20.78■□□□□ 0.92
CHCHD3-204ENST00000457942 CTCFP49711 727 aaPredicted RBP20.78■□□□□ 0.92
CHCHD3-204ENST00000457942 LBX1P52954 281 aa20.78■□□□□ 0.92
CHCHD3-204ENST00000457942 STYK1Q6J9G0 422 aa20.78■□□□□ 0.92
CHCHD3-204ENST00000457942 PLEKHF1Q96S99 279 aa20.78■□□□□ 0.92
CHCHD3-204ENST00000457942 ZNF277Q9NRM2 450 aaPredicted RBP20.78■□□□□ 0.92
CHCHD3-204ENST00000457942 SCN4AP35499 1836 aa20.77■□□□□ 0.92
CHCHD3-204ENST00000457942 TMEM88BA6NKF7 163 aa20.77■□□□□ 0.92
CHCHD3-204ENST00000457942 MASTLQ96GX5 879 aa20.77■□□□□ 0.92
CHCHD3-204ENST00000457942 THUMPD2Q9BTF0 503 aaKnown RBP20.77■□□□□ 0.92
CHCHD3-204ENST00000457942 CCDC93Q567U6 631 aa20.76■□□□□ 0.91
CHCHD3-204ENST00000457942 PRDM10Q9NQV6 1147 aa20.76■□□□□ 0.91
CHCHD3-204ENST00000457942 RNF123Q5XPI4 1314 aa20.76■□□□□ 0.91
CHCHD3-204ENST00000457942 FAM177BA6PVY3 158 aa20.75■□□□□ 0.91
CHCHD3-204ENST00000457942 SOGA3Q5TF21 947 aa20.75■□□□□ 0.91
CHCHD3-204ENST00000457942 NBPF5PQ86XG9 351 aaPredicted RBP20.75■□□□□ 0.91
CHCHD3-204ENST00000457942 L3MBTL3Q96JM7 780 aaPredicted RBP20.75■□□□□ 0.91
CHCHD3-204ENST00000457942 ADAMTSL1Q8N6G6 1762 aa20.74■□□□□ 0.91
CHCHD3-204ENST00000457942 NBPF26B4DH59 902 aa20.74■□□□□ 0.91
CHCHD3-204ENST00000457942 NBPF10Q6P3W6 841 aaKnown RBP20.74■□□□□ 0.91
CHCHD3-204ENST00000457942 NBPF15Q8N660 670 aa20.74■□□□□ 0.91
CHCHD3-204ENST00000457942 MAP1SQ66K74 1059 aaPredicted RBP20.73■□□□□ 0.91
CHCHD3-204ENST00000457942 CLEC4GQ6UXB4 293 aa20.73■□□□□ 0.91
CHCHD3-204ENST00000457942 NGEFQ8N5V2 710 aa20.73■□□□□ 0.91
CHCHD3-204ENST00000457942 HACL1Q9UJ83 578 aa20.73■□□□□ 0.91
CHCHD3-204ENST00000457942 MYBBP1AQ9BQG0 1328 aaKnown RBP20.73■□□□□ 0.91
CHCHD3-204ENST00000457942 ITGBL1O95965 494 aaPredicted RBP20.72■□□□□ 0.91
CHCHD3-204ENST00000457942 EPHX2P34913 555 aa20.72■□□□□ 0.91
CHCHD3-204ENST00000457942 FKBP4Q02790 459 aaKnown RBP eCLIP20.72■□□□□ 0.91
CHCHD3-204ENST00000457942 FAM161AQ3B820 660 aa20.72■□□□□ 0.91
CHCHD3-204ENST00000457942 NIP7Q9Y221 180 aaKnown RBP eCLIP20.72■□□□□ 0.91
CHCHD3-204ENST00000457942 RIPK4P57078 832 aa20.71■□□□□ 0.91
CHCHD3-204ENST00000457942 GRM1Q13255 1194 aa20.71■□□□□ 0.91
CHCHD3-204ENST00000457942 ABT1Q9ULW3 272 aaKnown RBP20.71■□□□□ 0.91
CHCHD3-204ENST00000457942 HSPA8P11142 646 aaKnown RBP20.7■□□□□ 0.9
CHCHD3-204ENST00000457942 EIF4A1P60842 406 aaKnown RBP20.7■□□□□ 0.9
CHCHD3-204ENST00000457942 C7orf43Q8WVR3 580 aa20.7■□□□□ 0.9
CHCHD3-204ENST00000457942 WBP1LQ9NX94 342 aa20.7■□□□□ 0.9
CHCHD3-204ENST00000457942 TSPYL4Q9UJ04 414 aa20.7■□□□□ 0.9
CHCHD3-204ENST00000457942 RRP7AQ9Y3A4 280 aaKnown RBP20.7■□□□□ 0.9
CHCHD3-204ENST00000457942 MYL6BP14649 208 aa20.69■□□□□ 0.9
CHCHD3-204ENST00000457942 NPR1P16066 1061 aa20.69■□□□□ 0.9
CHCHD3-204ENST00000457942 LMOD3Q0VAK6 560 aa20.69■□□□□ 0.9
CHCHD3-204ENST00000457942 WDR43Q15061 677 aaKnown RBP eCLIP20.69■□□□□ 0.9
CHCHD3-204ENST00000457942 KIF6Q6ZMV9 814 aa20.69■□□□□ 0.9
CHCHD3-204ENST00000457942 PAXIP1Q6ZW49 1069 aaPredicted RBP20.69■□□□□ 0.9
CHCHD3-204ENST00000457942 ABHD8Q96I13 439 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms