RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 TATP17735 454 aaPredicted RBP22.34■■□□□ 1.17
SEMA3B-209ENST00000456560 KLHL40Q2TBA0 621 aa22.34■■□□□ 1.17
SEMA3B-209ENST00000456560 GRPEL1Q9HAV7 217 aa22.34■■□□□ 1.17
SEMA3B-209ENST00000456560 DDX58O95786 925 aaKnown RBP22.33■■□□□ 1.17
SEMA3B-209ENST00000456560 CNTROBQ8N137 903 aa22.33■■□□□ 1.17
SEMA3B-209ENST00000456560 UBE2Q2Q8WVN8 375 aa22.33■■□□□ 1.16
SEMA3B-209ENST00000456560 KAZALD1Q96I82 304 aa22.33■■□□□ 1.16
SEMA3B-209ENST00000456560 SPG7Q9UQ90 795 aa22.33■■□□□ 1.16
SEMA3B-209ENST00000456560 MEGF6O75095 1541 aa22.32■■□□□ 1.16
SEMA3B-209ENST00000456560 C5P01031 1676 aa22.32■■□□□ 1.16
SEMA3B-209ENST00000456560 GRM8O00222 908 aa22.32■■□□□ 1.16
SEMA3B-209ENST00000456560 SLC39A6Q13433 755 aa22.32■■□□□ 1.16
SEMA3B-209ENST00000456560 OS9Q13438 667 aaPredicted RBP22.32■■□□□ 1.16
SEMA3B-209ENST00000456560 GAS2L3Q86XJ1 694 aa22.32■■□□□ 1.16
SEMA3B-209ENST00000456560 PLEKHG2Q9H7P9 1386 aa22.32■■□□□ 1.16
SEMA3B-209ENST00000456560 GLRX3O76003 335 aaKnown RBP22.31■■□□□ 1.16
SEMA3B-209ENST00000456560 MCTP1Q6DN14 999 aa22.31■■□□□ 1.16
SEMA3B-209ENST00000456560 ERC1Q8IUD2 1116 aa22.31■■□□□ 1.16
SEMA3B-209ENST00000456560 CLASRPQ8N2M8 674 aaKnown RBP22.31■■□□□ 1.16
SEMA3B-209ENST00000456560 SUCLG2Q96I99 432 aa22.31■■□□□ 1.16
SEMA3B-209ENST00000456560 LMBRD1Q9NUN5 540 aa22.31■■□□□ 1.16
SEMA3B-209ENST00000456560 RAD50Q92878 1312 aa22.3■■□□□ 1.16
SEMA3B-209ENST00000456560 LSG1Q9H089 658 aaKnown RBP22.3■■□□□ 1.16
SEMA3B-209ENST00000456560 NFATC2IPQ8NCF5 419 aa22.3■■□□□ 1.16
SEMA3B-209ENST00000456560 INTS4Q96HW7 963 aaKnown RBP22.3■■□□□ 1.16
SEMA3B-209ENST00000456560 PA2G4Q9UQ80 394 aaKnown RBP22.3■■□□□ 1.16
SEMA3B-209ENST00000456560 AIMP1Q12904 312 aaKnown RBP22.29■■□□□ 1.16
SEMA3B-209ENST00000456560 IFNL2Q8IZJ0 200 aa22.29■■□□□ 1.16
SEMA3B-209ENST00000456560 DDX49Q9Y6V7 483 aaKnown RBP22.29■■□□□ 1.16
SEMA3B-209ENST00000456560 IGKV5-2P06315 115 aa22.29■■□□□ 1.16
SEMA3B-209ENST00000456560 ECHDC1Q9NTX5 307 aa22.29■■□□□ 1.16
SEMA3B-209ENST00000456560 MRC1P22897 1456 aa22.29■■□□□ 1.16
SEMA3B-209ENST00000456560 LARP1Q6PKG0 1096 aaKnown RBP22.28■■□□□ 1.16
SEMA3B-209ENST00000456560 TNS3Q68CZ2 1445 aa22.28■■□□□ 1.16
SEMA3B-209ENST00000456560 BICC1Q9H694 974 aaKnown RBP22.27■■□□□ 1.16
SEMA3B-209ENST00000456560 CLCN1P35523 988 aa22.27■■□□□ 1.16
SEMA3B-209ENST00000456560 CABLES1Q8TDN4 633 aa22.27■■□□□ 1.16
SEMA3B-209ENST00000456560 UPF3BQ9BZI7 483 aaKnown RBP22.27■■□□□ 1.16
SEMA3B-209ENST00000456560 RIC3Q7Z5B4 369 aa22.26■■□□□ 1.15
SEMA3B-209ENST00000456560 ZNF496Q96IT1 587 aaPredicted RBP22.26■■□□□ 1.15
SEMA3B-209ENST00000456560 PKD1L3Q7Z443 1732 aa22.25■■□□□ 1.15
SEMA3B-209ENST00000456560 CYP27B1O15528 508 aa22.25■■□□□ 1.15
SEMA3B-209ENST00000456560 SASH1O94885 1247 aa22.25■■□□□ 1.15
SEMA3B-209ENST00000456560 LRP10Q7Z4F1 713 aa22.25■■□□□ 1.15
SEMA3B-209ENST00000456560 XAGE3Q8WTP9 111 aa22.25■■□□□ 1.15
SEMA3B-209ENST00000456560 DCAF5Q96JK2 942 aa22.25■■□□□ 1.15
SEMA3B-209ENST00000456560 SNX14Q9Y5W7 946 aa22.25■■□□□ 1.15
SEMA3B-209ENST00000456560 BRD1O95696 1058 aa22.25■■□□□ 1.15
SEMA3B-209ENST00000456560 IFIT2P09913 472 aaKnown RBP22.25■■□□□ 1.15
SEMA3B-209ENST00000456560 CSB-PGBD3P0DP91 1061 aa22.25■■□□□ 1.15
SEMA3B-209ENST00000456560 NEURL1BA8MQ27 555 aa22.24■■□□□ 1.15
SEMA3B-209ENST00000456560 CWC27Q6UX04 472 aaKnown RBP22.24■■□□□ 1.15
SEMA3B-209ENST00000456560 GPATCH3Q96I76 525 aa22.24■■□□□ 1.15
SEMA3B-209ENST00000456560 NAP1L5Q96NT1 182 aaPredicted RBP22.24■■□□□ 1.15
SEMA3B-209ENST00000456560 METTL22Q9BUU2 404 aaPredicted RBP22.24■■□□□ 1.15
SEMA3B-209ENST00000456560 SPATA31A3Q5VYP0 1347 aa22.24■■□□□ 1.15
SEMA3B-209ENST00000456560 MYL6BP14649 208 aa22.23■■□□□ 1.15
SEMA3B-209ENST00000456560 CHRNA2Q15822 529 aa22.23■■□□□ 1.15
SEMA3B-209ENST00000456560 COPS6Q7L5N1 327 aa22.23■■□□□ 1.15
SEMA3B-209ENST00000456560 CPDO75976 1380 aa22.23■■□□□ 1.15
SEMA3B-209ENST00000456560 SNRPA1P09661 255 aaKnown RBP22.23■■□□□ 1.15
SEMA3B-209ENST00000456560 GCKRQ14397 625 aa22.23■■□□□ 1.15
SEMA3B-209ENST00000456560 AACSQ86V21 672 aa22.23■■□□□ 1.15
SEMA3B-209ENST00000456560 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.23■■□□□ 1.15
SEMA3B-209ENST00000456560 NEXNQ0ZGT2 675 aa22.22■■□□□ 1.15
SEMA3B-209ENST00000456560 G3BP1Q13283 466 aaKnown RBP eCLIP22.22■■□□□ 1.15
SEMA3B-209ENST00000456560 TTC14Q96N46 770 aa22.22■■□□□ 1.15
SEMA3B-209ENST00000456560 USP16Q9Y5T5 823 aa22.22■■□□□ 1.15
SEMA3B-209ENST00000456560 KIAA1211Q6ZU35 1233 aa22.22■■□□□ 1.15
SEMA3B-209ENST00000456560 NOL8Q76FK4 1167 aaKnown RBP22.22■■□□□ 1.15
SEMA3B-209ENST00000456560 RASEFQ8IZ41 740 aa22.22■■□□□ 1.15
SEMA3B-209ENST00000456560 RUFY2Q8WXA3 655 aa22.22■■□□□ 1.15
SEMA3B-209ENST00000456560 EAF2Q96CJ1 260 aaPredicted RBP22.22■■□□□ 1.15
SEMA3B-209ENST00000456560 DIAPH3Q9NSV4 1193 aa22.22■■□□□ 1.15
SEMA3B-209ENST00000456560 PRPF40AO75400 957 aaKnown RBP22.21■■□□□ 1.15
SEMA3B-209ENST00000456560 EVI5LQ96CN4 794 aa22.21■■□□□ 1.15
SEMA3B-209ENST00000456560 ZNF445P59923 1031 aa22.21■■□□□ 1.15
SEMA3B-209ENST00000456560 MYD88Q99836 296 aa22.21■■□□□ 1.15
SEMA3B-209ENST00000456560 ANKRD13DQ6ZTN6 518 aa22.19■■□□□ 1.14
SEMA3B-209ENST00000456560 KCNB2Q92953 911 aa22.19■■□□□ 1.14
SEMA3B-209ENST00000456560 EPHA10Q5JZY3 1008 aa22.19■■□□□ 1.14
SEMA3B-209ENST00000456560 TTC5Q8N0Z6 440 aa22.19■■□□□ 1.14
SEMA3B-209ENST00000456560 GPT2Q8TD30 523 aa22.19■■□□□ 1.14
SEMA3B-209ENST00000456560 CHAMP1Q96JM3 812 aa22.19■■□□□ 1.14
SEMA3B-209ENST00000456560 FMNL2Q96PY5 1086 aa22.19■■□□□ 1.14
SEMA3B-209ENST00000456560 PTH1RQ03431 593 aa22.18■■□□□ 1.14
SEMA3B-209ENST00000456560 GLI3P10071 1580 aa22.17■■□□□ 1.14
SEMA3B-209ENST00000456560 PIP4K2BP78356 416 aa22.17■■□□□ 1.14
SEMA3B-209ENST00000456560 CAVIN1Q6NZI2 390 aaKnown RBP22.17■■□□□ 1.14
SEMA3B-209ENST00000456560 SOS2Q07890 1332 aaPredicted RBP22.17■■□□□ 1.14
SEMA3B-209ENST00000456560 FOXD4L5Q5VV16 416 aaPredicted RBP22.16■■□□□ 1.14
SEMA3B-209ENST00000456560 FOXD4L4Q8WXT5 416 aaPredicted RBP22.16■■□□□ 1.14
SEMA3B-209ENST00000456560 CCDC8Q9H0W5 538 aaPredicted RBP22.16■■□□□ 1.14
SEMA3B-209ENST00000456560 PARP4Q9UKK3 1724 aaKnown RBP22.16■■□□□ 1.14
SEMA3B-209ENST00000456560 NCLP19338 710 aaKnown RBP22.16■■□□□ 1.14
SEMA3B-209ENST00000456560 ZSCAN23Q3MJ62 389 aa22.16■■□□□ 1.14
SEMA3B-209ENST00000456560 COL15A1P39059 1388 aa22.16■■□□□ 1.14
SEMA3B-209ENST00000456560 AK2P54819 239 aa22.15■■□□□ 1.14
SEMA3B-209ENST00000456560 CABP4P57796 275 aa22.15■■□□□ 1.14
SEMA3B-209ENST00000456560 SNRKQ9NRH2 765 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms