RNA–Protein interactions for RNA: ENST00000456150.5

CSPG5-203, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 1 (best) BASIC

Gene CSPG5, Length 2,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-203ENST00000456150 GPATCH3Q96I76 525 aa24.33■■□□□ 1.48
CSPG5-203ENST00000456150 DDX21Q9NR30 783 aaKnown RBP eCLIP24.33■■□□□ 1.48
CSPG5-203ENST00000456150 SCN11AQ9UI33 1791 aa24.32■■□□□ 1.48
CSPG5-203ENST00000456150 ABCA3Q99758 1704 aa24.32■■□□□ 1.48
CSPG5-203ENST00000456150 AEBP2Q6ZN18 517 aaPredicted RBP24.32■■□□□ 1.48
CSPG5-203ENST00000456150 LINS1Q8NG48 757 aa24.32■■□□□ 1.48
CSPG5-203ENST00000456150 RRAGDQ9NQL2 400 aaPredicted RBP24.32■■□□□ 1.48
CSPG5-203ENST00000456150 ZNF445P59923 1031 aa24.31■■□□□ 1.48
CSPG5-203ENST00000456150 IL25Q9H293 177 aa24.31■■□□□ 1.48
CSPG5-203ENST00000456150 CPDO75976 1380 aa24.31■■□□□ 1.48
CSPG5-203ENST00000456150 RAPGEF4Q8WZA2 1011 aa24.31■■□□□ 1.48
CSPG5-203ENST00000456150 KIAA1211Q6ZU35 1233 aa24.3■■□□□ 1.48
CSPG5-203ENST00000456150 BRD1O95696 1058 aa24.3■■□□□ 1.48
CSPG5-203ENST00000456150 NCLP19338 710 aaKnown RBP24.3■■□□□ 1.48
CSPG5-203ENST00000456150 UPF3BQ9BZI7 483 aaKnown RBP24.3■■□□□ 1.48
CSPG5-203ENST00000456150 UTYO14607 1347 aa24.3■■□□□ 1.48
CSPG5-203ENST00000456150 PRPF40AO75400 957 aaKnown RBP24.29■■□□□ 1.48
CSPG5-203ENST00000456150 RUFY2Q8WXA3 655 aa24.29■■□□□ 1.48
CSPG5-203ENST00000456150 ABCC6O95255 1503 aa24.29■■□□□ 1.48
CSPG5-203ENST00000456150 PRAMEF22A3QJZ6 481 aa24.28■■□□□ 1.48
CSPG5-203ENST00000456150 GRM8O00222 908 aa24.28■■□□□ 1.48
CSPG5-203ENST00000456150 CWF19L2Q2TBE0 894 aaKnown RBP24.28■■□□□ 1.48
CSPG5-203ENST00000456150 CAVIN1Q6NZI2 390 aaKnown RBP24.28■■□□□ 1.48
CSPG5-203ENST00000456150 LSG1Q9H089 658 aaKnown RBP24.28■■□□□ 1.48
CSPG5-203ENST00000456150 ECHDC1Q9NTX5 307 aa24.28■■□□□ 1.48
CSPG5-203ENST00000456150 AHDC1Q5TGY3 1603 aaPredicted RBP24.28■■□□□ 1.48
CSPG5-203ENST00000456150 IFIT2P09913 472 aaKnown RBP24.27■■□□□ 1.48
CSPG5-203ENST00000456150 ZSCAN23Q3MJ62 389 aa24.26■■□□□ 1.47
CSPG5-203ENST00000456150 NOL8Q76FK4 1167 aaKnown RBP24.26■■□□□ 1.47
CSPG5-203ENST00000456150 SLC52A2Q9HAB3 445 aa24.26■■□□□ 1.47
CSPG5-203ENST00000456150 PRDM11Q9NQV5 511 aa24.26■■□□□ 1.47
CSPG5-203ENST00000456150 DIAPH3Q9NSV4 1193 aa24.26■■□□□ 1.47
CSPG5-203ENST00000456150 PLEKHG2Q9H7P9 1386 aa24.26■■□□□ 1.47
CSPG5-203ENST00000456150 C5P01031 1676 aa24.26■■□□□ 1.47
CSPG5-203ENST00000456150 TATP17735 454 aaPredicted RBP24.26■■□□□ 1.47
CSPG5-203ENST00000456150 NASPP49321 788 aaPredicted RBP24.26■■□□□ 1.47
CSPG5-203ENST00000456150 PIP4K2BP78356 416 aa24.26■■□□□ 1.47
CSPG5-203ENST00000456150 ZNF790Q6PG37 636 aa24.26■■□□□ 1.47
CSPG5-203ENST00000456150 SPG7Q9UQ90 795 aa24.26■■□□□ 1.47
CSPG5-203ENST00000456150 SNX14Q9Y5W7 946 aa24.26■■□□□ 1.47
CSPG5-203ENST00000456150 CWC27Q6UX04 472 aaKnown RBP24.25■■□□□ 1.47
CSPG5-203ENST00000456150 ANP32BQ92688 251 aaKnown RBP24.25■■□□□ 1.47
CSPG5-203ENST00000456150 TRIM44Q96DX7 344 aaPredicted RBP24.25■■□□□ 1.47
CSPG5-203ENST00000456150 NLRP2Q9NX02 1062 aa24.25■■□□□ 1.47
CSPG5-203ENST00000456150 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.25■■□□□ 1.47
CSPG5-203ENST00000456150 MBD3O95983 291 aa24.24■■□□□ 1.47
CSPG5-203ENST00000456150 CSB-PGBD3P0DP91 1061 aa24.24■■□□□ 1.47
CSPG5-203ENST00000456150 CCDC173Q0VFZ6 552 aa24.24■■□□□ 1.47
CSPG5-203ENST00000456150 PDIA6Q15084 440 aa24.24■■□□□ 1.47
CSPG5-203ENST00000456150 LARP1Q6PKG0 1096 aaKnown RBP24.24■■□□□ 1.47
CSPG5-203ENST00000456150 SUCLG2Q96I99 432 aa24.24■■□□□ 1.47
CSPG5-203ENST00000456150 KDM6AO15550 1401 aaPredicted RBP24.24■■□□□ 1.47
CSPG5-203ENST00000456150 GPT2Q8TD30 523 aa24.23■■□□□ 1.47
CSPG5-203ENST00000456150 PA2G4Q9UQ80 394 aaKnown RBP24.23■■□□□ 1.47
CSPG5-203ENST00000456150 NEXNQ0ZGT2 675 aa24.23■■□□□ 1.47
CSPG5-203ENST00000456150 AIMP1Q12904 312 aaKnown RBP24.23■■□□□ 1.47
CSPG5-203ENST00000456150 RIC3Q7Z5B4 369 aa24.23■■□□□ 1.47
CSPG5-203ENST00000456150 EVI5LQ96CN4 794 aa24.23■■□□□ 1.47
CSPG5-203ENST00000456150 PHKG2P15735 406 aa24.22■■□□□ 1.47
CSPG5-203ENST00000456150 G3BP1Q13283 466 aaKnown RBP eCLIP24.22■■□□□ 1.47
CSPG5-203ENST00000456150 CLCN1P35523 988 aa24.22■■□□□ 1.47
CSPG5-203ENST00000456150 AACSQ86V21 672 aa24.22■■□□□ 1.47
CSPG5-203ENST00000456150 BICC1Q9H694 974 aaKnown RBP24.22■■□□□ 1.47
CSPG5-203ENST00000456150 WDR33Q9C0J8 1336 aaKnown RBP24.21■■□□□ 1.47
CSPG5-203ENST00000456150 TOM1O60784 492 aa24.21■■□□□ 1.47
CSPG5-203ENST00000456150 FOXD4L5Q5VV16 416 aaPredicted RBP24.21■■□□□ 1.47
CSPG5-203ENST00000456150 FOXD4L4Q8WXT5 416 aaPredicted RBP24.21■■□□□ 1.47
CSPG5-203ENST00000456150 TTC14Q96N46 770 aa24.21■■□□□ 1.47
CSPG5-203ENST00000456150 IFNL2Q8IZJ0 200 aa24.2■■□□□ 1.47
CSPG5-203ENST00000456150 KAZALD1Q96I82 304 aa24.2■■□□□ 1.47
CSPG5-203ENST00000456150 HIP1O00291 1037 aa24.2■■□□□ 1.46
CSPG5-203ENST00000456150 SLC39A6Q13433 755 aa24.2■■□□□ 1.46
CSPG5-203ENST00000456150 PPP1R9BQ96SB3 815 aa24.2■■□□□ 1.46
CSPG5-203ENST00000456150 MRC1P22897 1456 aa24.19■■□□□ 1.46
CSPG5-203ENST00000456150 PHLPP1O60346 1717 aa24.19■■□□□ 1.46
CSPG5-203ENST00000456150 MEGF6O75095 1541 aa24.19■■□□□ 1.46
CSPG5-203ENST00000456150 IGKV5-2P06315 115 aa24.19■■□□□ 1.46
CSPG5-203ENST00000456150 RASEFQ8IZ41 740 aa24.18■■□□□ 1.46
CSPG5-203ENST00000456150 LIMCH1Q9UPQ0 1083 aa24.18■■□□□ 1.46
CSPG5-203ENST00000456150 COL16A1Q07092 1604 aaPredicted RBP24.17■■□□□ 1.46
CSPG5-203ENST00000456150 NEURL1BA8MQ27 555 aa24.17■■□□□ 1.46
CSPG5-203ENST00000456150 ESPNB1AK53 854 aa24.17■■□□□ 1.46
CSPG5-203ENST00000456150 UBAP1LF5GYI3 381 aa24.17■■□□□ 1.46
CSPG5-203ENST00000456150 SASH1O94885 1247 aa24.17■■□□□ 1.46
CSPG5-203ENST00000456150 NFATC2IPQ8NCF5 419 aa24.17■■□□□ 1.46
CSPG5-203ENST00000456150 PKD1L3Q7Z443 1732 aa24.17■■□□□ 1.46
CSPG5-203ENST00000456150 COL5A2P05997 1499 aaPredicted RBP24.17■■□□□ 1.46
CSPG5-203ENST00000456150 AK2P54819 239 aa24.17■■□□□ 1.46
CSPG5-203ENST00000456150 XAGE3Q8WTP9 111 aa24.17■■□□□ 1.46
CSPG5-203ENST00000456150 METTL22Q9BUU2 404 aaPredicted RBP24.17■■□□□ 1.46
CSPG5-203ENST00000456150 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.17■■□□□ 1.46
CSPG5-203ENST00000456150 MYL6BP14649 208 aa24.16■■□□□ 1.46
CSPG5-203ENST00000456150 GCKRQ14397 625 aa24.15■■□□□ 1.46
CSPG5-203ENST00000456150 TTC5Q8N0Z6 440 aa24.15■■□□□ 1.46
CSPG5-203ENST00000456150 DCAF5Q96JK2 942 aa24.15■■□□□ 1.46
CSPG5-203ENST00000456150 TM6SF1Q9BZW5 370 aa24.15■■□□□ 1.46
CSPG5-203ENST00000456150 RBM27Q9P2N5 1060 aaKnown RBP24.15■■□□□ 1.46
CSPG5-203ENST00000456150 COL22A1Q8NFW1 1626 aaPredicted RBP24.15■■□□□ 1.46
CSPG5-203ENST00000456150 SNRPA1P09661 255 aaKnown RBP24.15■■□□□ 1.46
CSPG5-203ENST00000456150 KCNB2Q92953 911 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms