RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 SETD1AO15047 1707 aaKnown RBP6.98□□□□□ -1.29
HMGB1P4-201ENST00000455362 ASXL1Q8IXJ9 1541 aa6.98□□□□□ -1.29
HMGB1P4-201ENST00000455362 RNF40O75150 1001 aa6.98□□□□□ -1.29
HMGB1P4-201ENST00000455362 MAPK1P28482 360 aa6.98□□□□□ -1.29
HMGB1P4-201ENST00000455362 TMF1P82094 1093 aa6.98□□□□□ -1.29
HMGB1P4-201ENST00000455362 PTK7Q13308 1070 aa6.98□□□□□ -1.29
HMGB1P4-201ENST00000455362 DESI1Q6ICB0 168 aa6.98□□□□□ -1.29
HMGB1P4-201ENST00000455362 FBXO33Q7Z6M2 555 aa6.98□□□□□ -1.29
HMGB1P4-201ENST00000455362 ANKLE2Q86XL3 938 aa6.98□□□□□ -1.29
HMGB1P4-201ENST00000455362 TBX22Q9Y458 520 aa6.98□□□□□ -1.29
HMGB1P4-201ENST00000455362 YTHDC2Q9H6S0 1430 aaKnown RBP6.98□□□□□ -1.29
HMGB1P4-201ENST00000455362 CENPJQ9HC77 1338 aaPredicted RBP6.98□□□□□ -1.29
HMGB1P4-201ENST00000455362 MED14O60244 1454 aa6.98□□□□□ -1.29
HMGB1P4-201ENST00000455362 METP08581 1390 aa6.97□□□□□ -1.29
HMGB1P4-201ENST00000455362 LRPPRCP42704 1394 aaKnown RBP6.97□□□□□ -1.29
HMGB1P4-201ENST00000455362 ATP5J2-PTCD1G3V325 749 aa6.97□□□□□ -1.29
HMGB1P4-201ENST00000455362 H3BRB1 525 aa6.97□□□□□ -1.29
HMGB1P4-201ENST00000455362 TAGLNQ01995 201 aaKnown RBP6.97□□□□□ -1.29
HMGB1P4-201ENST00000455362 ADAMTS13Q76LX8 1427 aa6.97□□□□□ -1.29
HMGB1P4-201ENST00000455362 ANKMY2Q8IV38 441 aa6.97□□□□□ -1.29
HMGB1P4-201ENST00000455362 GLYCTKQ8IVS8 523 aa6.97□□□□□ -1.29
HMGB1P4-201ENST00000455362 ZSCAN29Q8IWY8 852 aaPredicted RBP6.97□□□□□ -1.29
HMGB1P4-201ENST00000455362 SLC26A8Q96RN1 970 aa6.97□□□□□ -1.29
HMGB1P4-201ENST00000455362 TUT1Q9H6E5 874 aaKnown RBP6.97□□□□□ -1.29
HMGB1P4-201ENST00000455362 SEPT9Q9UHD8 586 aaPredicted RBP6.97□□□□□ -1.29
HMGB1P4-201ENST00000455362 ABCC11Q96J66 1382 aa6.96□□□□□ -1.29
HMGB1P4-201ENST00000455362 DISP3Q9P2K9 1392 aa6.96□□□□□ -1.29
HMGB1P4-201ENST00000455362 SBNO2Q9Y2G9 1366 aa6.96□□□□□ -1.29
HMGB1P4-201ENST00000455362 ARHGEF28Q8N1W1 1705 aaKnown RBP6.96□□□□□ -1.29
HMGB1P4-201ENST00000455362 ZBBXA8MT70 800 aa6.96□□□□□ -1.3
HMGB1P4-201ENST00000455362 SWI5Q1ZZU3 235 aa6.96□□□□□ -1.3
HMGB1P4-201ENST00000455362 DPH6Q7L8W6 267 aa6.96□□□□□ -1.3
HMGB1P4-201ENST00000455362 LAPTM4BQ86VI4 370 aa6.96□□□□□ -1.3
HMGB1P4-201ENST00000455362 SYMPKQ92797 1274 aaKnown RBP6.96□□□□□ -1.3
HMGB1P4-201ENST00000455362 PRR14Q9BWN1 585 aa6.96□□□□□ -1.3
HMGB1P4-201ENST00000455362 EGFL7Q9UHF1 273 aa6.96□□□□□ -1.3
HMGB1P4-201ENST00000455362 LZTS3O60299 673 aaPredicted RBP6.95□□□□□ -1.3
HMGB1P4-201ENST00000455362 SCNN1AP37088 669 aa6.95□□□□□ -1.3
HMGB1P4-201ENST00000455362 EAPPQ56P03 285 aaPredicted RBP6.95□□□□□ -1.3
HMGB1P4-201ENST00000455362 GIMAP6Q6P9H5 292 aa6.95□□□□□ -1.3
HMGB1P4-201ENST00000455362 C1orf216Q8TAB5 229 aa6.95□□□□□ -1.3
HMGB1P4-201ENST00000455362 ASB16Q96NS5 453 aa6.95□□□□□ -1.3
HMGB1P4-201ENST00000455362 PRAM1Q96QH2 718 aa6.95□□□□□ -1.3
HMGB1P4-201ENST00000455362 NBPF3Q9H094 633 aa6.95□□□□□ -1.3
HMGB1P4-201ENST00000455362 POGKQ9P215 609 aa6.95□□□□□ -1.3
HMGB1P4-201ENST00000455362 QRICH2Q9H0J4 1663 aa6.95□□□□□ -1.3
HMGB1P4-201ENST00000455362 PER1O15534 1290 aaPredicted RBP6.94□□□□□ -1.3
HMGB1P4-201ENST00000455362 FBXO45P0C2W1 286 aa6.94□□□□□ -1.3
HMGB1P4-201ENST00000455362 ZNF211Q13398 564 aaPredicted RBP6.94□□□□□ -1.3
HMGB1P4-201ENST00000455362 NCOA4Q13772 614 aa6.94□□□□□ -1.3
HMGB1P4-201ENST00000455362 SAFB2Q14151 953 aaKnown RBP eCLIP6.94□□□□□ -1.3
HMGB1P4-201ENST00000455362 SAMD7Q7Z3H4 446 aa6.94□□□□□ -1.3
HMGB1P4-201ENST00000455362 WAPLQ7Z5K2 1190 aa6.94□□□□□ -1.3
HMGB1P4-201ENST00000455362 DHX37Q8IY37 1157 aaKnown RBP6.94□□□□□ -1.3
HMGB1P4-201ENST00000455362 TANGO6Q9C0B7 1094 aa6.94□□□□□ -1.3
HMGB1P4-201ENST00000455362 DCTN4Q9UJW0 460 aa6.94□□□□□ -1.3
HMGB1P4-201ENST00000455362 DLC1Q96QB1 1528 aa6.94□□□□□ -1.3
HMGB1P4-201ENST00000455362 ZC3H4Q9UPT8 1303 aaKnown RBP6.94□□□□□ -1.3
HMGB1P4-201ENST00000455362 TECPR2O15040 1411 aa6.93□□□□□ -1.3
HMGB1P4-201ENST00000455362 SCAMP3O14828 347 aaKnown RBP6.93□□□□□ -1.3
HMGB1P4-201ENST00000455362 DPYDQ12882 1025 aa6.93□□□□□ -1.3
HMGB1P4-201ENST00000455362 SLFNL1Q499Z3 407 aa6.93□□□□□ -1.3
HMGB1P4-201ENST00000455362 LYPD8Q6UX82 237 aa6.93□□□□□ -1.3
HMGB1P4-201ENST00000455362 MRPL50Q8N5N7 158 aaKnown RBP6.93□□□□□ -1.3
HMGB1P4-201ENST00000455362 FAM174AQ8TBP5 190 aa6.93□□□□□ -1.3
HMGB1P4-201ENST00000455362 ZFRQ96KR1 1074 aaKnown RBP6.93□□□□□ -1.3
HMGB1P4-201ENST00000455362 BACH2Q9BYV9 841 aa6.93□□□□□ -1.3
HMGB1P4-201ENST00000455362 ANO2Q9NQ90 1003 aa6.93□□□□□ -1.3
HMGB1P4-201ENST00000455362 FKBPLQ9UIM3 349 aa6.93□□□□□ -1.3
HMGB1P4-201ENST00000455362 DIP2AQ14689 1571 aa6.93□□□□□ -1.3
HMGB1P4-201ENST00000455362 EVC2Q86UK5 1308 aa6.93□□□□□ -1.3
HMGB1P4-201ENST00000455362 PIK3R4Q99570 1358 aa6.93□□□□□ -1.3
HMGB1P4-201ENST00000455362 FAM135BQ49AJ0 1406 aa6.93□□□□□ -1.3
HMGB1P4-201ENST00000455362 PTPRUQ92729 1446 aa6.93□□□□□ -1.3
HMGB1P4-201ENST00000455362 ACTN4O43707 911 aaKnown RBP6.92□□□□□ -1.3
HMGB1P4-201ENST00000455362 ICMTO60725 284 aa6.92□□□□□ -1.3
HMGB1P4-201ENST00000455362 MCCD1P59942 119 aaPredicted RBP6.92□□□□□ -1.3
HMGB1P4-201ENST00000455362 COL19A1Q14993 1142 aa6.92□□□□□ -1.3
HMGB1P4-201ENST00000455362 MORN1Q5T089 497 aa6.92□□□□□ -1.3
HMGB1P4-201ENST00000455362 C9orf131Q5VYM1 1079 aa6.92□□□□□ -1.3
HMGB1P4-201ENST00000455362 NOP9Q86U38 636 aaKnown RBP6.92□□□□□ -1.3
HMGB1P4-201ENST00000455362 RNF166Q96A37 237 aaPredicted RBP6.92□□□□□ -1.3
HMGB1P4-201ENST00000455362 PANK3Q9H999 370 aa6.92□□□□□ -1.3
HMGB1P4-201ENST00000455362 TMA7Q9Y2S6 64 aaKnown RBP6.92□□□□□ -1.3
HMGB1P4-201ENST00000455362 KNDC1Q76NI1 1749 aa6.92□□□□□ -1.3
HMGB1P4-201ENST00000455362 ROBO2Q9HCK4 1378 aa6.92□□□□□ -1.3
HMGB1P4-201ENST00000455362 PLEKHH1Q9ULM0 1364 aa6.92□□□□□ -1.3
HMGB1P4-201ENST00000455362 CHD2O14647 1828 aaKnown RBP6.92□□□□□ -1.3
HMGB1P4-201ENST00000455362 NPHP4O75161 1426 aaPredicted RBP6.92□□□□□ -1.3
HMGB1P4-201ENST00000455362 ANP32CO43423 234 aa6.91□□□□□ -1.3
HMGB1P4-201ENST00000455362 PRMT3O60678 531 aa6.91□□□□□ -1.3
HMGB1P4-201ENST00000455362 HSPA2P54652 639 aa6.91□□□□□ -1.3
HMGB1P4-201ENST00000455362 HDLBPQ00341 1268 aaKnown RBP6.91□□□□□ -1.3
HMGB1P4-201ENST00000455362 RNF135Q8IUD6 432 aa6.91□□□□□ -1.3
HMGB1P4-201ENST00000455362 OGFOD1Q8N543 542 aa6.91□□□□□ -1.3
HMGB1P4-201ENST00000455362 PIK3R5Q8WYR1 880 aa6.91□□□□□ -1.3
HMGB1P4-201ENST00000455362 DNAJC2Q99543 621 aaKnown RBP6.91□□□□□ -1.3
HMGB1P4-201ENST00000455362 CDK19Q9BWU1 502 aa6.91□□□□□ -1.3
HMGB1P4-201ENST00000455362 SLC27A5Q9Y2P5 690 aa6.91□□□□□ -1.3
HMGB1P4-201ENST00000455362 CPS1P31327 1500 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms