RNA–Protein interactions for RNA: ENST00000455136.5

STRC-206, Transcript of stereocilin, humanhuman

TSL 3

Gene STRC, Length 1,104 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRC-206ENST00000455136 BEGAINQ9BUH8 593 aa16.44■□□□□ 0.22
STRC-206ENST00000455136 ABT1Q9ULW3 272 aaKnown RBP16.44■□□□□ 0.22
STRC-206ENST00000455136 COL11A2P13942 1736 aaPredicted RBP16.44■□□□□ 0.22
STRC-206ENST00000455136 SCN4AP35499 1836 aa16.43■□□□□ 0.22
STRC-206ENST00000455136 HMOX1P09601 288 aa16.43■□□□□ 0.22
STRC-206ENST00000455136 EPHX2P34913 555 aa16.43■□□□□ 0.22
STRC-206ENST00000455136 MLLT1Q03111 559 aaPredicted RBP16.43■□□□□ 0.22
STRC-206ENST00000455136 KNSTRNQ9Y448 316 aa16.43■□□□□ 0.22
STRC-206ENST00000455136 ANKRD31Q8N7Z5 1873 aa16.43■□□□□ 0.22
STRC-206ENST00000455136 SCN7AQ01118 1682 aa16.43■□□□□ 0.22
STRC-206ENST00000455136 FKBP4Q02790 459 aaKnown RBP eCLIP16.42■□□□□ 0.22
STRC-206ENST00000455136 TEFQ10587 303 aa16.42■□□□□ 0.22
STRC-206ENST00000455136 MTHFSDQ2M296 383 aaKnown RBP16.42■□□□□ 0.22
STRC-206ENST00000455136 CNTROBQ8N137 903 aa16.42■□□□□ 0.22
STRC-206ENST00000455136 TIMELESSQ9UNS1 1208 aa16.42■□□□□ 0.22
STRC-206ENST00000455136 WDR33Q9C0J8 1336 aaKnown RBP16.42■□□□□ 0.22
STRC-206ENST00000455136 HEG1Q9ULI3 1381 aa16.41■□□□□ 0.22
STRC-206ENST00000455136 CCDC85CA6NKD9 419 aa16.41■□□□□ 0.22
STRC-206ENST00000455136 RTKN2Q8IZC4 609 aa16.41■□□□□ 0.22
STRC-206ENST00000455136 ZNF496Q96IT1 587 aaPredicted RBP16.41■□□□□ 0.22
STRC-206ENST00000455136 PCDH10Q9P2E7 1040 aa16.41■□□□□ 0.22
STRC-206ENST00000455136 ZNF541Q9H0D2 1346 aa16.41■□□□□ 0.22
STRC-206ENST00000455136 NPR1P16066 1061 aa16.4■□□□□ 0.22
STRC-206ENST00000455136 ZNF790Q6PG37 636 aa16.4■□□□□ 0.22
STRC-206ENST00000455136 NBPF5PQ86XG9 351 aaPredicted RBP16.4■□□□□ 0.22
STRC-206ENST00000455136 ZNF277Q9NRM2 450 aaPredicted RBP16.4■□□□□ 0.22
STRC-206ENST00000455136 UBR2Q8IWV8 1755 aa16.39■□□□□ 0.21
STRC-206ENST00000455136 CAMTA2O94983 1202 aa16.39■□□□□ 0.21
STRC-206ENST00000455136 ECE1P42892 770 aa16.39■□□□□ 0.21
STRC-206ENST00000455136 MAP1SQ66K74 1059 aaPredicted RBP16.39■□□□□ 0.21
STRC-206ENST00000455136 PAXIP1Q6ZW49 1069 aaPredicted RBP16.39■□□□□ 0.21
STRC-206ENST00000455136 DZIP3Q86Y13 1208 aaKnown RBP16.39■□□□□ 0.21
STRC-206ENST00000455136 FMNL2Q96PY5 1086 aa16.39■□□□□ 0.21
STRC-206ENST00000455136 ZNF652Q9Y2D9 606 aa16.39■□□□□ 0.21
STRC-206ENST00000455136 SLX4Q8IY92 1834 aa16.38■□□□□ 0.21
STRC-206ENST00000455136 EIF4G2P78344 907 aaKnown RBP eCLIP16.38■□□□□ 0.21
STRC-206ENST00000455136 GPC2Q8N158 579 aa16.38■□□□□ 0.21
STRC-206ENST00000455136 C7orf43Q8WVR3 580 aa16.38■□□□□ 0.21
STRC-206ENST00000455136 RNF123Q5XPI4 1314 aa16.38■□□□□ 0.21
STRC-206ENST00000455136 VIRMAQ69YN4 1812 aaKnown RBP16.38■□□□□ 0.21
STRC-206ENST00000455136 JDP2Q8WYK2 163 aa16.37■□□□□ 0.21
STRC-206ENST00000455136 ARFGEF2Q9Y6D5 1785 aa16.36■□□□□ 0.21
STRC-206ENST00000455136 GNAT3A8MTJ3 354 aa16.36■□□□□ 0.21
STRC-206ENST00000455136 DIAPH1O60610 1272 aaKnown RBP16.36■□□□□ 0.21
STRC-206ENST00000455136 A1BGP04217 495 aa16.36■□□□□ 0.21
STRC-206ENST00000455136 LMOD1P29536 600 aaPredicted RBP16.36■□□□□ 0.21
STRC-206ENST00000455136 IARSP41252 1262 aaKnown RBP16.36■□□□□ 0.21
STRC-206ENST00000455136 CLEC4GQ6UXB4 293 aa16.36■□□□□ 0.21
STRC-206ENST00000455136 TPTE2Q6XPS3 522 aa16.36■□□□□ 0.21
STRC-206ENST00000455136 DDX21Q9NR30 783 aaKnown RBP eCLIP16.36■□□□□ 0.21
STRC-206ENST00000455136 FZD9O00144 591 aa16.35■□□□□ 0.21
STRC-206ENST00000455136 ALDH1B1P30837 517 aa16.35■□□□□ 0.21
STRC-206ENST00000455136 GAS2L2Q8NHY3 880 aa16.35■□□□□ 0.21
STRC-206ENST00000455136 CAPNS2Q96L46 248 aa16.35■□□□□ 0.21
STRC-206ENST00000455136 ADAMTSL1Q8N6G6 1762 aa16.34■□□□□ 0.21
STRC-206ENST00000455136 RGS19P49795 217 aa16.34■□□□□ 0.21
STRC-206ENST00000455136 EIF6P56537 245 aaKnown RBP16.34■□□□□ 0.21
STRC-206ENST00000455136 GRM1Q13255 1194 aa16.34■□□□□ 0.21
STRC-206ENST00000455136 SYNE4Q8N205 404 aa16.34■□□□□ 0.21
STRC-206ENST00000455136 GPR101Q96P66 508 aaPredicted RBP16.34■□□□□ 0.21
STRC-206ENST00000455136 CACNA1SQ13698 1873 aa16.33■□□□□ 0.21
STRC-206ENST00000455136 KLRG2A4D1S0 409 aaPredicted RBP16.33■□□□□ 0.2
STRC-206ENST00000455136 TRIM26Q12899 539 aaPredicted RBP16.33■□□□□ 0.2
STRC-206ENST00000455136 CFAP44Q96MT7 982 aa16.33■□□□□ 0.2
STRC-206ENST00000455136 GJA3Q9Y6H8 435 aa16.33■□□□□ 0.2
STRC-206ENST00000455136 HSPA5P11021 654 aaKnown RBP16.32■□□□□ 0.2
STRC-206ENST00000455136 GTF2E1P29083 439 aaPredicted RBP16.32■□□□□ 0.2
STRC-206ENST00000455136 IL17REQ8NFR9 667 aa16.32■□□□□ 0.2
STRC-206ENST00000455136 RGL2O15211 777 aa16.31■□□□□ 0.2
STRC-206ENST00000455136 CA12O43570 354 aa16.31■□□□□ 0.2
STRC-206ENST00000455136 OLFM4Q6UX06 510 aa16.31■□□□□ 0.2
STRC-206ENST00000455136 PSMD1Q99460 953 aa16.31■□□□□ 0.2
STRC-206ENST00000455136 NIP7Q9Y221 180 aaKnown RBP eCLIP16.31■□□□□ 0.2
STRC-206ENST00000455136 BTBD11A6QL63 1104 aa16.3■□□□□ 0.2
STRC-206ENST00000455136 MAP2K2P36507 400 aa16.3■□□□□ 0.2
STRC-206ENST00000455136 AMER1Q5JTC6 1135 aaPredicted RBP16.3■□□□□ 0.2
STRC-206ENST00000455136 CC2D2BQ6DHV5 1058 aa16.3■□□□□ 0.2
STRC-206ENST00000455136 CYP4F22Q6NT55 531 aa16.3■□□□□ 0.2
STRC-206ENST00000455136 BCORQ6W2J9 1755 aa16.3■□□□□ 0.2
STRC-206ENST00000455136 THSD7BQ9C0I4 1608 aa16.3■□□□□ 0.2
STRC-206ENST00000455136 U2SURPO15042 1029 aaKnown RBP16.29■□□□□ 0.2
STRC-206ENST00000455136 GRIPAP1Q4V328 841 aa16.29■□□□□ 0.2
STRC-206ENST00000455136 USP50Q70EL3 339 aaPredicted RBP16.29■□□□□ 0.2
STRC-206ENST00000455136 FAM177BA6PVY3 158 aa16.28■□□□□ 0.2
STRC-206ENST00000455136 TLL2Q9Y6L7 1015 aa16.28■□□□□ 0.2
STRC-206ENST00000455136 SNRPA1P09661 255 aaKnown RBP16.27■□□□□ 0.2
STRC-206ENST00000455136 PIP4K2AP48426 406 aaPredicted RBP16.27■□□□□ 0.2
STRC-206ENST00000455136 LARGE2Q8N3Y3 721 aa16.27■□□□□ 0.2
STRC-206ENST00000455136 USP16Q9Y5T5 823 aa16.27■□□□□ 0.2
STRC-206ENST00000455136 CEMIPQ8WUJ3 1361 aa16.26■□□□□ 0.19
STRC-206ENST00000455136 MCOLN1Q9GZU1 580 aa16.26■□□□□ 0.19
STRC-206ENST00000455136 NYXQ9GZU5 481 aa16.26■□□□□ 0.19
STRC-206ENST00000455136 TSKSQ9UJT2 592 aa16.26■□□□□ 0.19
STRC-206ENST00000455136 EPS15P42566 896 aa16.25■□□□□ 0.19
STRC-206ENST00000455136 SCNN1DP51172 638 aa16.25■□□□□ 0.19
STRC-206ENST00000455136 CST9Q5W186 159 aa16.25■□□□□ 0.19
STRC-206ENST00000455136 RPGRQ92834 1020 aaKnown RBP16.25■□□□□ 0.19
STRC-206ENST00000455136 TRAF5O00463 557 aa16.24■□□□□ 0.19
STRC-206ENST00000455136 KCNQ3O43525 872 aa16.24■□□□□ 0.19
STRC-206ENST00000455136 AOC2O75106 756 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms