RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 PIGBQ92521 554 aa8.47□□□□□ -1.05
ECHDC1-210ENST00000454859 ATG3Q9NT62 314 aa8.47□□□□□ -1.05
ECHDC1-210ENST00000454859 C9orf78Q9NZ63 289 aaPredicted RBP8.47□□□□□ -1.05
ECHDC1-210ENST00000454859 COL5A3P25940 1745 aaPredicted RBP8.47□□□□□ -1.05
ECHDC1-210ENST00000454859 ATRNO75882 1429 aa8.47□□□□□ -1.05
ECHDC1-210ENST00000454859 ERVV-1B6SEH8 477 aa8.47□□□□□ -1.05
ECHDC1-210ENST00000454859 HSP90B1P14625 803 aaKnown RBP8.47□□□□□ -1.05
ECHDC1-210ENST00000454859 NGLY1Q96IV0 654 aa8.47□□□□□ -1.05
ECHDC1-210ENST00000454859 FBXO3Q9UK99 471 aa8.47□□□□□ -1.05
ECHDC1-210ENST00000454859 TUBGCP6Q96RT7 1819 aa8.47□□□□□ -1.05
ECHDC1-210ENST00000454859 NEURL1BA8MQ27 555 aa8.46□□□□□ -1.05
ECHDC1-210ENST00000454859 ADAMTS2O95450 1211 aa8.46□□□□□ -1.05
ECHDC1-210ENST00000454859 RGS3P49796 1198 aa8.46□□□□□ -1.05
ECHDC1-210ENST00000454859 COPS6Q7L5N1 327 aa8.46□□□□□ -1.05
ECHDC1-210ENST00000454859 XAGE3Q8WTP9 111 aa8.46□□□□□ -1.05
ECHDC1-210ENST00000454859 AK7Q96M32 723 aa8.46□□□□□ -1.05
ECHDC1-210ENST00000454859 LRRCC1Q9C099 1032 aa8.46□□□□□ -1.05
ECHDC1-210ENST00000454859 STAP2Q9UGK3 403 aa8.46□□□□□ -1.05
ECHDC1-210ENST00000454859 USP16Q9Y5T5 823 aa8.46□□□□□ -1.05
ECHDC1-210ENST00000454859 IL6STP40189 918 aaPredicted RBP8.46□□□□□ -1.06
ECHDC1-210ENST00000454859 GCKRQ14397 625 aa8.46□□□□□ -1.06
ECHDC1-210ENST00000454859 KIF1BPQ96EK5 621 aa8.46□□□□□ -1.06
ECHDC1-210ENST00000454859 LRRFIP2Q9Y608 721 aaKnown RBP8.46□□□□□ -1.06
ECHDC1-210ENST00000454859 USP42Q9H9J4 1324 aaKnown RBP8.45□□□□□ -1.06
ECHDC1-210ENST00000454859 PROSER3Q2NL68 480 aa8.45□□□□□ -1.06
ECHDC1-210ENST00000454859 KIF6Q6ZMV9 814 aa8.45□□□□□ -1.06
ECHDC1-210ENST00000454859 NECTIN2Q92692 538 aa8.45□□□□□ -1.06
ECHDC1-210ENST00000454859 A0A087WZG4 1122 aa8.45□□□□□ -1.06
ECHDC1-210ENST00000454859 RABL6Q3YEC7 729 aaPredicted RBP8.45□□□□□ -1.06
ECHDC1-210ENST00000454859 CASC1Q6TDU7 716 aa8.45□□□□□ -1.06
ECHDC1-210ENST00000454859 TRPC5Q9UL62 973 aaPredicted RBP8.45□□□□□ -1.06
ECHDC1-210ENST00000454859 SBF2Q86WG5 1849 aa8.44□□□□□ -1.06
ECHDC1-210ENST00000454859 LY75O60449 1722 aa8.44□□□□□ -1.06
ECHDC1-210ENST00000454859 MYH3P11055 1940 aa8.44□□□□□ -1.06
ECHDC1-210ENST00000454859 NUP98P52948 1817 aa8.44□□□□□ -1.06
ECHDC1-210ENST00000454859 NUTM2BA6NNL0 878 aaPredicted RBP8.44□□□□□ -1.06
ECHDC1-210ENST00000454859 NUTM2EB1AL46 878 aaPredicted RBP8.44□□□□□ -1.06
ECHDC1-210ENST00000454859 H7C1W4 665 aa8.44□□□□□ -1.06
ECHDC1-210ENST00000454859 NUTM2AQ8IVF1 878 aaPredicted RBP8.44□□□□□ -1.06
ECHDC1-210ENST00000454859 PLA2G12BQ9BX93 195 aa8.44□□□□□ -1.06
ECHDC1-210ENST00000454859 C1orf115Q9H7X2 142 aa8.44□□□□□ -1.06
ECHDC1-210ENST00000454859 USP21Q9UK80 565 aa8.44□□□□□ -1.06
ECHDC1-210ENST00000454859 NBPF26B4DH59 902 aa8.43□□□□□ -1.06
ECHDC1-210ENST00000454859 IGKV5-2P06315 115 aa8.43□□□□□ -1.06
ECHDC1-210ENST00000454859 CYP19A1P11511 503 aaPredicted RBP8.43□□□□□ -1.06
ECHDC1-210ENST00000454859 RC3H1Q5TC82 1133 aaKnown RBP8.43□□□□□ -1.06
ECHDC1-210ENST00000454859 NBPF14Q5TI25 921 aa8.43□□□□□ -1.06
ECHDC1-210ENST00000454859 NBPF10Q6P3W6 841 aaKnown RBP8.43□□□□□ -1.06
ECHDC1-210ENST00000454859 PPP1R42Q7Z4L9 355 aa8.43□□□□□ -1.06
ECHDC1-210ENST00000454859 PLEKHM2Q8IWE5 1019 aa8.43□□□□□ -1.06
ECHDC1-210ENST00000454859 NBPF15Q8N660 670 aa8.43□□□□□ -1.06
ECHDC1-210ENST00000454859 ISCA1Q9BUE6 129 aa8.43□□□□□ -1.06
ECHDC1-210ENST00000454859 LNPKQ9C0E8 428 aa8.43□□□□□ -1.06
ECHDC1-210ENST00000454859 CWC25Q9NXE8 425 aaPredicted RBP8.43□□□□□ -1.06
ECHDC1-210ENST00000454859 USP35Q9P2H5 1018 aa8.43□□□□□ -1.06
ECHDC1-210ENST00000454859 TTC41PQ6P2S7 1318 aa8.43□□□□□ -1.06
ECHDC1-210ENST00000454859 CDHR2Q9BYE9 1310 aa8.43□□□□□ -1.06
ECHDC1-210ENST00000454859 LAMB2P55268 1798 aa8.43□□□□□ -1.06
ECHDC1-210ENST00000454859 BCORQ6W2J9 1755 aa8.43□□□□□ -1.06
ECHDC1-210ENST00000454859 TCIRG1Q13488 830 aa8.43□□□□□ -1.06
ECHDC1-210ENST00000454859 TTC22Q5TAA0 569 aa8.43□□□□□ -1.06
ECHDC1-210ENST00000454859 MARCH10Q8NA82 808 aaPredicted RBP8.43□□□□□ -1.06
ECHDC1-210ENST00000454859 GPATCH3Q96I76 525 aa8.43□□□□□ -1.06
ECHDC1-210ENST00000454859 COPRSQ9NQ92 184 aa8.43□□□□□ -1.06
ECHDC1-210ENST00000454859 MAP3K15Q6ZN16 1313 aa8.43□□□□□ -1.06
ECHDC1-210ENST00000454859 SALL3Q9BXA9 1300 aa8.43□□□□□ -1.06
ECHDC1-210ENST00000454859 AK9Q5TCS8 1911 aa8.43□□□□□ -1.06
ECHDC1-210ENST00000454859 PRAMEF22A3QJZ6 481 aa8.42□□□□□ -1.06
ECHDC1-210ENST00000454859 SRGAP3O43295 1099 aa8.42□□□□□ -1.06
ECHDC1-210ENST00000454859 NBPF7P0C2Y1 421 aaPredicted RBP8.42□□□□□ -1.06
ECHDC1-210ENST00000454859 NPM2Q86SE8 214 aaKnown RBP8.42□□□□□ -1.06
ECHDC1-210ENST00000454859 IPO9Q96P70 1041 aaKnown RBP8.42□□□□□ -1.06
ECHDC1-210ENST00000454859 ASAP1Q9ULH1 1129 aa8.42□□□□□ -1.06
ECHDC1-210ENST00000454859 BTAF1O14981 1849 aa8.42□□□□□ -1.06
ECHDC1-210ENST00000454859 CDC45O75419 566 aa8.42□□□□□ -1.06
ECHDC1-210ENST00000454859 MYL6BP14649 208 aa8.42□□□□□ -1.06
ECHDC1-210ENST00000454859 PRIM1P49642 420 aaKnown RBP8.42□□□□□ -1.06
ECHDC1-210ENST00000454859 GIGYF2Q6Y7W6 1299 aaKnown RBP8.42□□□□□ -1.06
ECHDC1-210ENST00000454859 FBXO41Q8TF61 875 aa8.42□□□□□ -1.06
ECHDC1-210ENST00000454859 GJD4Q96KN9 370 aaPredicted RBP8.42□□□□□ -1.06
ECHDC1-210ENST00000454859 GPR108Q9NPR9 543 aa8.42□□□□□ -1.06
ECHDC1-210ENST00000454859 CNTNAP4Q9C0A0 1308 aa8.42□□□□□ -1.06
ECHDC1-210ENST00000454859 PCCAP05165 728 aaPredicted RBP8.41□□□□□ -1.06
ECHDC1-210ENST00000454859 CASP7P55210 303 aa8.41□□□□□ -1.06
ECHDC1-210ENST00000454859 MEX3CQ5U5Q3 659 aaKnown RBP8.41□□□□□ -1.06
ECHDC1-210ENST00000454859 C8orf37Q96NL8 207 aa8.41□□□□□ -1.06
ECHDC1-210ENST00000454859 MYD88Q99836 296 aa8.41□□□□□ -1.06
ECHDC1-210ENST00000454859 CCDC9Q9Y3X0 531 aaKnown RBP8.41□□□□□ -1.06
ECHDC1-210ENST00000454859 SPEF2Q9C093 1822 aa8.41□□□□□ -1.06
ECHDC1-210ENST00000454859 PNMA6EA0A0J9YXQ4 647 aa8.41□□□□□ -1.06
ECHDC1-210ENST00000454859 ERC2O15083 957 aa8.41□□□□□ -1.06
ECHDC1-210ENST00000454859 PTCD1O75127 700 aaKnown RBP8.41□□□□□ -1.06
ECHDC1-210ENST00000454859 CIAO1O76071 339 aa8.41□□□□□ -1.06
ECHDC1-210ENST00000454859 PDE1AP54750 535 aa8.41□□□□□ -1.06
ECHDC1-210ENST00000454859 AIMP1Q12904 312 aaKnown RBP8.41□□□□□ -1.06
ECHDC1-210ENST00000454859 PARP10Q53GL7 1025 aa8.41□□□□□ -1.06
ECHDC1-210ENST00000454859 CLEC4GQ6UXB4 293 aa8.41□□□□□ -1.06
ECHDC1-210ENST00000454859 DNAJC10Q8IXB1 793 aa8.41□□□□□ -1.06
ECHDC1-210ENST00000454859 RHPN1Q8TCX5 695 aa8.41□□□□□ -1.06
ECHDC1-210ENST00000454859 CCDC87Q9NVE4 849 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 286.9 ms