RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 DIP2AQ14689 1571 aa14.42□□□□□ -0.1
SMPD4-213ENST00000454468 FAM227BQ96M60 508 aa14.41□□□□□ -0.1
SMPD4-213ENST00000454468 KDRP35968 1356 aa14.41□□□□□ -0.1
SMPD4-213ENST00000454468 IBTKQ9P2D0 1353 aaPredicted RBP14.41□□□□□ -0.1
SMPD4-213ENST00000454468 GOLGA6L4A6NEF3 574 aa14.41□□□□□ -0.1
SMPD4-213ENST00000454468 ITSN1Q15811 1721 aa14.41□□□□□ -0.1
SMPD4-213ENST00000454468 LINS1Q8NG48 757 aa14.4□□□□□ -0.1
SMPD4-213ENST00000454468 CWC22Q9HCG8 908 aaKnown RBP14.4□□□□□ -0.1
SMPD4-213ENST00000454468 TLR7Q9NYK1 1049 aaKnown RBP14.4□□□□□ -0.1
SMPD4-213ENST00000454468 RGS12O14924 1447 aa14.4□□□□□ -0.1
SMPD4-213ENST00000454468 KIF24Q5T7B8 1368 aa14.4□□□□□ -0.1
SMPD4-213ENST00000454468 A1BGP04217 495 aa14.4□□□□□ -0.1
SMPD4-213ENST00000454468 DDX46Q7L014 1031 aaKnown RBP14.4□□□□□ -0.1
SMPD4-213ENST00000454468 DDX21Q9NR30 783 aaKnown RBP eCLIP14.4□□□□□ -0.1
SMPD4-213ENST00000454468 SNRKQ9NRH2 765 aa14.39□□□□□ -0.11
SMPD4-213ENST00000454468 PDRG1Q9NUG6 133 aa14.39□□□□□ -0.11
SMPD4-213ENST00000454468 FMNL2Q96PY5 1086 aa14.39□□□□□ -0.11
SMPD4-213ENST00000454468 LRRC2Q9BYS8 371 aa14.39□□□□□ -0.11
SMPD4-213ENST00000454468 SNRPA1P09661 255 aaKnown RBP14.39□□□□□ -0.11
SMPD4-213ENST00000454468 PTMSP20962 102 aa14.39□□□□□ -0.11
SMPD4-213ENST00000454468 LMBR1LQ6UX01 489 aa14.39□□□□□ -0.11
SMPD4-213ENST00000454468 ERC1Q8IUD2 1116 aa14.39□□□□□ -0.11
SMPD4-213ENST00000454468 RASEFQ8IZ41 740 aa14.39□□□□□ -0.11
SMPD4-213ENST00000454468 GPTP24298 496 aa14.38□□□□□ -0.11
SMPD4-213ENST00000454468 FKBP4Q02790 459 aaKnown RBP eCLIP14.38□□□□□ -0.11
SMPD4-213ENST00000454468 EAF2Q96CJ1 260 aaPredicted RBP14.38□□□□□ -0.11
SMPD4-213ENST00000454468 CYP46A1Q9Y6A2 500 aa14.38□□□□□ -0.11
SMPD4-213ENST00000454468 MSNP26038 577 aaKnown RBP14.38□□□□□ -0.11
SMPD4-213ENST00000454468 CEBPZQ03701 1054 aaKnown RBP14.38□□□□□ -0.11
SMPD4-213ENST00000454468 AK2P54819 239 aa14.38□□□□□ -0.11
SMPD4-213ENST00000454468 PTH1RQ03431 593 aa14.38□□□□□ -0.11
SMPD4-213ENST00000454468 CADPS2Q86UW7 1296 aa14.38□□□□□ -0.11
SMPD4-213ENST00000454468 SLC52A2Q9HAB3 445 aa14.38□□□□□ -0.11
SMPD4-213ENST00000454468 TMEM94Q12767 1356 aa14.38□□□□□ -0.11
SMPD4-213ENST00000454468 NMIQ13287 307 aaPredicted RBP14.37□□□□□ -0.11
SMPD4-213ENST00000454468 ERBB3P21860 1342 aa14.37□□□□□ -0.11
SMPD4-213ENST00000454468 UBR1Q8IWV7 1749 aa14.37□□□□□ -0.11
SMPD4-213ENST00000454468 ANKRD26Q9UPS8 1709 aa14.37□□□□□ -0.11
SMPD4-213ENST00000454468 NPHP3Q7Z494 1330 aa14.37□□□□□ -0.11
SMPD4-213ENST00000454468 MCM2P49736 904 aa14.37□□□□□ -0.11
SMPD4-213ENST00000454468 TFCP2Q12800 502 aa14.37□□□□□ -0.11
SMPD4-213ENST00000454468 CCDC129Q6ZRS4 1044 aa14.37□□□□□ -0.11
SMPD4-213ENST00000454468 DDX11Q96FC9 970 aa14.37□□□□□ -0.11
SMPD4-213ENST00000454468 RRAGDQ9NQL2 400 aaPredicted RBP14.37□□□□□ -0.11
SMPD4-213ENST00000454468 DLG5Q8TDM6 1919 aa14.36□□□□□ -0.11
SMPD4-213ENST00000454468 NPHP4O75161 1426 aaPredicted RBP14.36□□□□□ -0.11
SMPD4-213ENST00000454468 WASHC4Q2M389 1173 aa14.36□□□□□ -0.11
SMPD4-213ENST00000454468 ZNF594Q96JF6 807 aaPredicted RBP14.36□□□□□ -0.11
SMPD4-213ENST00000454468 ARID3AQ99856 593 aa14.36□□□□□ -0.11
SMPD4-213ENST00000454468 PHKG2P15735 406 aa14.36□□□□□ -0.11
SMPD4-213ENST00000454468 TIMM10P62072 90 aa14.36□□□□□ -0.11
SMPD4-213ENST00000454468 DNTTIP2Q5QJE6 756 aaKnown RBP14.36□□□□□ -0.11
SMPD4-213ENST00000454468 SGSM2O43147 1006 aa14.35□□□□□ -0.11
SMPD4-213ENST00000454468 SNX14Q9Y5W7 946 aa14.35□□□□□ -0.11
SMPD4-213ENST00000454468 ALDH1L1O75891 902 aa14.35□□□□□ -0.11
SMPD4-213ENST00000454468 EPHA10Q5JZY3 1008 aa14.35□□□□□ -0.11
SMPD4-213ENST00000454468 OSBPL3Q9H4L5 887 aa14.35□□□□□ -0.11
SMPD4-213ENST00000454468 RBM8AQ9Y5S9 174 aaKnown RBP14.35□□□□□ -0.11
SMPD4-213ENST00000454468 SSH2Q76I76 1423 aa14.35□□□□□ -0.11
SMPD4-213ENST00000454468 CHGBP05060 677 aa14.35□□□□□ -0.11
SMPD4-213ENST00000454468 ZSCAN23Q3MJ62 389 aa14.35□□□□□ -0.11
SMPD4-213ENST00000454468 STK11IPQ8N1F8 1099 aa14.35□□□□□ -0.11
SMPD4-213ENST00000454468 AK9Q5TCS8 1911 aa14.35□□□□□ -0.11
SMPD4-213ENST00000454468 GOLIM4O00461 696 aa14.34□□□□□ -0.11
SMPD4-213ENST00000454468 PRIM1P49642 420 aaKnown RBP14.34□□□□□ -0.11
SMPD4-213ENST00000454468 ADCK5Q3MIX3 580 aa14.34□□□□□ -0.11
SMPD4-213ENST00000454468 HSP90AB3PQ58FF7 597 aa14.34□□□□□ -0.11
SMPD4-213ENST00000454468 FAM173BQ6P4H8 233 aa14.34□□□□□ -0.11
SMPD4-213ENST00000454468 FBXW7Q969H0 707 aa14.34□□□□□ -0.11
SMPD4-213ENST00000454468 RGPD8O14715 1765 aaPredicted RBP14.34□□□□□ -0.11
SMPD4-213ENST00000454468 KLHL40Q2TBA0 621 aa14.34□□□□□ -0.11
SMPD4-213ENST00000454468 TTLL7Q6ZT98 887 aa14.34□□□□□ -0.11
SMPD4-213ENST00000454468 ZCRB1Q8TBF4 217 aaKnown RBP14.34□□□□□ -0.11
SMPD4-213ENST00000454468 CYP27B1O15528 508 aa14.34□□□□□ -0.11
SMPD4-213ENST00000454468 GCKRQ14397 625 aa14.34□□□□□ -0.11
SMPD4-213ENST00000454468 HSP90AA2PQ14568 343 aaPredicted RBP14.34□□□□□ -0.11
SMPD4-213ENST00000454468 SLFNL1Q499Z3 407 aa14.34□□□□□ -0.11
SMPD4-213ENST00000454468 BLOC1S2Q6QNY1 142 aa14.34□□□□□ -0.11
SMPD4-213ENST00000454468 PI4K2BQ8TCG2 481 aa14.34□□□□□ -0.11
SMPD4-213ENST00000454468 BABAM1Q9NWV8 329 aa14.34□□□□□ -0.11
SMPD4-213ENST00000454468 NSFL1CQ9UNZ2 370 aaKnown RBP14.34□□□□□ -0.11
SMPD4-213ENST00000454468 CNPY2Q9Y2B0 182 aa14.34□□□□□ -0.11
SMPD4-213ENST00000454468 ADCY9O60503 1353 aa14.34□□□□□ -0.11
SMPD4-213ENST00000454468 REREQ9P2R6 1566 aa14.33□□□□□ -0.11
SMPD4-213ENST00000454468 RNF20Q5VTR2 975 aa14.33□□□□□ -0.11
SMPD4-213ENST00000454468 DBNDD2Q9BQY9 259 aa14.33□□□□□ -0.11
SMPD4-213ENST00000454468 LIMCH1Q9UPQ0 1083 aa14.33□□□□□ -0.11
SMPD4-213ENST00000454468 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.33□□□□□ -0.11
SMPD4-213ENST00000454468 ANKARQ7Z5J8 1434 aa14.33□□□□□ -0.12
SMPD4-213ENST00000454468 NEURL1BA8MQ27 555 aa14.33□□□□□ -0.12
SMPD4-213ENST00000454468 IGKV5-2P06315 115 aa14.33□□□□□ -0.12
SMPD4-213ENST00000454468 LARP1BQ659C4 914 aaKnown RBP14.33□□□□□ -0.12
SMPD4-213ENST00000454468 EVI5LQ96CN4 794 aa14.33□□□□□ -0.12
SMPD4-213ENST00000454468 SEC62Q99442 399 aaKnown RBP14.33□□□□□ -0.12
SMPD4-213ENST00000454468 H3BQV1 296 aa14.33□□□□□ -0.12
SMPD4-213ENST00000454468 IFFO2Q5TF58 517 aa14.33□□□□□ -0.12
SMPD4-213ENST00000454468 RAB11FIP4Q86YS3 637 aa14.33□□□□□ -0.12
SMPD4-213ENST00000454468 FAM43AQ8N2R8 423 aa14.33□□□□□ -0.12
SMPD4-213ENST00000454468 TFIP11Q9UBB9 837 aaKnown RBP14.33□□□□□ -0.12
SMPD4-213ENST00000454468 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms