RNA–Protein interactions for RNA: ENST00000454252.1

CHEK2-220, Transcript of checkpoint kinase 2, humanhuman

TSL 3

Gene CHEK2, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-220ENST00000454252 DZIP3Q86Y13 1208 aaKnown RBP9.49□□□□□ -0.89
CHEK2-220ENST00000454252 SETDB2Q96T68 719 aa9.49□□□□□ -0.89
CHEK2-220ENST00000454252 PASKQ96RG2 1323 aa9.49□□□□□ -0.89
CHEK2-220ENST00000454252 CNTNAP1P78357 1384 aa9.49□□□□□ -0.89
CHEK2-220ENST00000454252 BTBD11A6QL63 1104 aa9.48□□□□□ -0.89
CHEK2-220ENST00000454252 VEGFBP49765 207 aa9.48□□□□□ -0.89
CHEK2-220ENST00000454252 ST5P78524 1137 aa9.48□□□□□ -0.89
CHEK2-220ENST00000454252 EAPPQ56P03 285 aaPredicted RBP9.48□□□□□ -0.89
CHEK2-220ENST00000454252 STYK1Q6J9G0 422 aa9.48□□□□□ -0.89
CHEK2-220ENST00000454252 NBPF5PQ86XG9 351 aaPredicted RBP9.48□□□□□ -0.89
CHEK2-220ENST00000454252 C7orf43Q8WVR3 580 aa9.48□□□□□ -0.89
CHEK2-220ENST00000454252 CNKSR1Q969H4 720 aa9.48□□□□□ -0.89
CHEK2-220ENST00000454252 MASTLQ96GX5 879 aa9.48□□□□□ -0.89
CHEK2-220ENST00000454252 FMNL2Q96PY5 1086 aa9.48□□□□□ -0.89
CHEK2-220ENST00000454252 TAF1DQ9H5J8 278 aaPredicted RBP9.48□□□□□ -0.89
CHEK2-220ENST00000454252 ANKRD31Q8N7Z5 1873 aa9.48□□□□□ -0.89
CHEK2-220ENST00000454252 LTBP3Q9NS15 1303 aa9.48□□□□□ -0.89
CHEK2-220ENST00000454252 SCN7AQ01118 1682 aa9.48□□□□□ -0.89
CHEK2-220ENST00000454252 DLEC1Q9Y238 1755 aa9.47□□□□□ -0.89
CHEK2-220ENST00000454252 NBPF26B4DH59 902 aa9.47□□□□□ -0.89
CHEK2-220ENST00000454252 PRKAR2BP31323 418 aa9.47□□□□□ -0.89
CHEK2-220ENST00000454252 FMR1Q06787 632 aaKnown RBP eCLIP9.47□□□□□ -0.89
CHEK2-220ENST00000454252 DCTN1Q14203 1278 aa9.47□□□□□ -0.89
CHEK2-220ENST00000454252 MAP1SQ66K74 1059 aaPredicted RBP9.47□□□□□ -0.89
CHEK2-220ENST00000454252 NBPF10Q6P3W6 841 aaKnown RBP9.47□□□□□ -0.89
CHEK2-220ENST00000454252 MCM10Q7L590 875 aa9.47□□□□□ -0.89
CHEK2-220ENST00000454252 NBPF15Q8N660 670 aa9.47□□□□□ -0.89
CHEK2-220ENST00000454252 GAS2L2Q8NHY3 880 aa9.47□□□□□ -0.89
CHEK2-220ENST00000454252 RNF123Q5XPI4 1314 aa9.47□□□□□ -0.89
CHEK2-220ENST00000454252 CEMIPQ8WUJ3 1361 aa9.47□□□□□ -0.89
CHEK2-220ENST00000454252 UBR2Q8IWV8 1755 aa9.47□□□□□ -0.89
CHEK2-220ENST00000454252 ITGBL1O95965 494 aaPredicted RBP9.46□□□□□ -0.9
CHEK2-220ENST00000454252 HLFQ16534 295 aa9.46□□□□□ -0.9
CHEK2-220ENST00000454252 LDHDQ86WU2 507 aa9.46□□□□□ -0.9
CHEK2-220ENST00000454252 L3MBTL3Q96JM7 780 aaPredicted RBP9.46□□□□□ -0.9
CHEK2-220ENST00000454252 RSPH6AQ9H0K4 717 aa9.46□□□□□ -0.9
CHEK2-220ENST00000454252 LBX1P52954 281 aa9.45□□□□□ -0.9
CHEK2-220ENST00000454252 CCDC93Q567U6 631 aa9.45□□□□□ -0.9
CHEK2-220ENST00000454252 TEX13AQ9BXU3 409 aaPredicted RBP9.45□□□□□ -0.9
CHEK2-220ENST00000454252 MIS18AQ9NYP9 233 aa9.45□□□□□ -0.9
CHEK2-220ENST00000454252 PDZRN3Q9UPQ7 1066 aa9.45□□□□□ -0.9
CHEK2-220ENST00000454252 NIP7Q9Y221 180 aaKnown RBP eCLIP9.45□□□□□ -0.9
CHEK2-220ENST00000454252 CLEC11AQ9Y240 323 aa9.45□□□□□ -0.9
CHEK2-220ENST00000454252 ABCC12Q96J65 1359 aa9.45□□□□□ -0.9
CHEK2-220ENST00000454252 SLX4Q8IY92 1834 aa9.45□□□□□ -0.9
CHEK2-220ENST00000454252 IQCA1LA6NCM1 817 aa9.44□□□□□ -0.9
CHEK2-220ENST00000454252 TMEM88BA6NKF7 163 aa9.44□□□□□ -0.9
CHEK2-220ENST00000454252 NPR1P16066 1061 aa9.44□□□□□ -0.9
CHEK2-220ENST00000454252 EPHX2P34913 555 aa9.44□□□□□ -0.9
CHEK2-220ENST00000454252 FKBP4Q02790 459 aaKnown RBP eCLIP9.44□□□□□ -0.9
CHEK2-220ENST00000454252 NPM2Q86SE8 214 aaKnown RBP9.44□□□□□ -0.9
CHEK2-220ENST00000454252 NUTM1Q86Y26 1132 aa9.44□□□□□ -0.9
CHEK2-220ENST00000454252 NGEFQ8N5V2 710 aa9.44□□□□□ -0.9
CHEK2-220ENST00000454252 COL4A5P29400 1685 aa9.44□□□□□ -0.9
CHEK2-220ENST00000454252 KLRG2A4D1S0 409 aaPredicted RBP9.43□□□□□ -0.9
CHEK2-220ENST00000454252 SOGA3Q5TF21 947 aa9.43□□□□□ -0.9
CHEK2-220ENST00000454252 SYNE4Q8N205 404 aa9.43□□□□□ -0.9
CHEK2-220ENST00000454252 HACL1Q9UJ83 578 aa9.43□□□□□ -0.9
CHEK2-220ENST00000454252 FZD9O00144 591 aa9.42□□□□□ -0.9
CHEK2-220ENST00000454252 TCERG1O14776 1098 aaKnown RBP9.42□□□□□ -0.9
CHEK2-220ENST00000454252 SNRPA1P09661 255 aaKnown RBP9.42□□□□□ -0.9
CHEK2-220ENST00000454252 HSPA8P11142 646 aaKnown RBP9.42□□□□□ -0.9
CHEK2-220ENST00000454252 IARSP41252 1262 aaKnown RBP9.42□□□□□ -0.9
CHEK2-220ENST00000454252 CTCFP49711 727 aaPredicted RBP9.42□□□□□ -0.9
CHEK2-220ENST00000454252 C3orf67Q6ZVT6 689 aa9.42□□□□□ -0.9
CHEK2-220ENST00000454252 CNTROBQ8N137 903 aa9.42□□□□□ -0.9
CHEK2-220ENST00000454252 AIDAQ96BJ3 306 aa9.42□□□□□ -0.9
CHEK2-220ENST00000454252 WBP1LQ9NX94 342 aa9.42□□□□□ -0.9
CHEK2-220ENST00000454252 GJA3Q9Y6H8 435 aa9.42□□□□□ -0.9
CHEK2-220ENST00000454252 FER1L6Q2WGJ9 1857 aa9.42□□□□□ -0.9
CHEK2-220ENST00000454252 SNED1Q8TER0 1413 aa9.41□□□□□ -0.9
CHEK2-220ENST00000454252 TRAF5O00463 557 aa9.41□□□□□ -0.9
CHEK2-220ENST00000454252 U2AF1L5P0DN76 240 aaPredicted RBP9.41□□□□□ -0.9
CHEK2-220ENST00000454252 U2AF1Q01081 240 aaKnown RBP eCLIP9.41□□□□□ -0.9
CHEK2-220ENST00000454252 GRM1Q13255 1194 aa9.41□□□□□ -0.9
CHEK2-220ENST00000454252 CLEC4GQ6UXB4 293 aa9.41□□□□□ -0.9
CHEK2-220ENST00000454252 PRDM10Q9NQV6 1147 aa9.41□□□□□ -0.9
CHEK2-220ENST00000454252 TSKSQ9UJT2 592 aa9.41□□□□□ -0.9
CHEK2-220ENST00000454252 ABT1Q9ULW3 272 aaKnown RBP9.41□□□□□ -0.9
CHEK2-220ENST00000454252 ZNF652Q9Y2D9 606 aa9.41□□□□□ -0.9
CHEK2-220ENST00000454252 UBN2Q6ZU65 1347 aa9.4□□□□□ -0.9
CHEK2-220ENST00000454252 WDR33Q9C0J8 1336 aaKnown RBP9.4□□□□□ -0.9
CHEK2-220ENST00000454252 RASSF10A6NK89 507 aa9.4□□□□□ -0.9
CHEK2-220ENST00000454252 GPTP24298 496 aa9.4□□□□□ -0.9
CHEK2-220ENST00000454252 EPS15P42566 896 aa9.4□□□□□ -0.9
CHEK2-220ENST00000454252 SCNN1DP51172 638 aa9.4□□□□□ -0.9
CHEK2-220ENST00000454252 FAM161AQ3B820 660 aa9.4□□□□□ -0.9
CHEK2-220ENST00000454252 TPTE2Q6XPS3 522 aa9.4□□□□□ -0.9
CHEK2-220ENST00000454252 TTLL7Q6ZT98 887 aa9.4□□□□□ -0.9
CHEK2-220ENST00000454252 RTKN2Q8IZC4 609 aa9.4□□□□□ -0.9
CHEK2-220ENST00000454252 THUMPD2Q9BTF0 503 aaKnown RBP9.4□□□□□ -0.9
CHEK2-220ENST00000454252 SIPA1L3O60292 1781 aaPredicted RBP9.4□□□□□ -0.91
CHEK2-220ENST00000454252 BCORQ6W2J9 1755 aa9.4□□□□□ -0.91
CHEK2-220ENST00000454252 GTF2E1P29083 439 aaPredicted RBP9.39□□□□□ -0.91
CHEK2-220ENST00000454252 DEFB115Q30KQ5 88 aa9.39□□□□□ -0.91
CHEK2-220ENST00000454252 CYP4F22Q6NT55 531 aa9.39□□□□□ -0.91
CHEK2-220ENST00000454252 PAXIP1Q6ZW49 1069 aaPredicted RBP9.39□□□□□ -0.91
CHEK2-220ENST00000454252 RTF1Q92541 710 aaKnown RBP9.39□□□□□ -0.91
CHEK2-220ENST00000454252 ZNF428Q96B54 188 aa9.39□□□□□ -0.91
CHEK2-220ENST00000454252 ABHD8Q96I13 439 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms