RNA–Protein interactions for RNA: ENST00000452668.1

CHKB-CPT1B-201, Transcript of CHKB-CPT1B readthrough (NMD candidate), humanhuman

TSL 4

Gene CHKB-CPT1B, Length 546 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1B-201ENST00000452668 TNRC6CQ9HCJ0 1690 aaKnown RBP15.75■□□□□ 0.11
CHKB-CPT1B-201ENST00000452668 NFKBIEO00221 500 aa15.74■□□□□ 0.11
CHKB-CPT1B-201ENST00000452668 PIP4K2AP48426 406 aaPredicted RBP15.74■□□□□ 0.11
CHKB-CPT1B-201ENST00000452668 SCN7AQ01118 1682 aa15.73■□□□□ 0.11
CHKB-CPT1B-201ENST00000452668 DCTN1Q14203 1278 aa15.73■□□□□ 0.11
CHKB-CPT1B-201ENST00000452668 PRPF40BQ6NWY9 871 aaKnown RBP15.73■□□□□ 0.11
CHKB-CPT1B-201ENST00000452668 DNAJC5GQ8N7S2 189 aa15.73■□□□□ 0.11
CHKB-CPT1B-201ENST00000452668 KLRG1Q96E93 195 aa15.73■□□□□ 0.11
CHKB-CPT1B-201ENST00000452668 NIP7Q9Y221 180 aaKnown RBP eCLIP15.73■□□□□ 0.11
CHKB-CPT1B-201ENST00000452668 SIPA1L3O60292 1781 aaPredicted RBP15.72■□□□□ 0.11
CHKB-CPT1B-201ENST00000452668 DLEC1Q9Y238 1755 aa15.72■□□□□ 0.11
CHKB-CPT1B-201ENST00000452668 MAPK8IP3Q9UPT6 1336 aa15.72■□□□□ 0.11
CHKB-CPT1B-201ENST00000452668 SRGNP10124 158 aa15.72■□□□□ 0.11
CHKB-CPT1B-201ENST00000452668 SBF1O95248 1867 aa15.71■□□□□ 0.11
CHKB-CPT1B-201ENST00000452668 FAM177BA6PVY3 158 aa15.71■□□□□ 0.11
CHKB-CPT1B-201ENST00000452668 RGL2O15211 777 aa15.71■□□□□ 0.11
CHKB-CPT1B-201ENST00000452668 NPR1P16066 1061 aa15.71■□□□□ 0.11
CHKB-CPT1B-201ENST00000452668 LTBP3Q9NS15 1303 aa15.7■□□□□ 0.1
CHKB-CPT1B-201ENST00000452668 PRAMEF22A3QJZ6 481 aa15.7■□□□□ 0.1
CHKB-CPT1B-201ENST00000452668 CCDC93Q567U6 631 aa15.7■□□□□ 0.1
CHKB-CPT1B-201ENST00000452668 KIF6Q6ZMV9 814 aa15.7■□□□□ 0.1
CHKB-CPT1B-201ENST00000452668 WDR90Q96KV7 1748 aa15.69■□□□□ 0.1
CHKB-CPT1B-201ENST00000452668 ALDH1B1P30837 517 aa15.69■□□□□ 0.1
CHKB-CPT1B-201ENST00000452668 HTRA3P83110 453 aa15.69■□□□□ 0.1
CHKB-CPT1B-201ENST00000452668 NGEFQ8N5V2 710 aa15.69■□□□□ 0.1
CHKB-CPT1B-201ENST00000452668 NYXQ9GZU5 481 aa15.69■□□□□ 0.1
CHKB-CPT1B-201ENST00000452668 MIS18AQ9NYP9 233 aa15.69■□□□□ 0.1
CHKB-CPT1B-201ENST00000452668 IQCA1LA6NCM1 817 aa15.68■□□□□ 0.1
CHKB-CPT1B-201ENST00000452668 PRELPP51888 382 aa15.68■□□□□ 0.1
CHKB-CPT1B-201ENST00000452668 RTKN2Q8IZC4 609 aa15.68■□□□□ 0.1
CHKB-CPT1B-201ENST00000452668 RRP7AQ9Y3A4 280 aaKnown RBP15.67■□□□□ 0.1
CHKB-CPT1B-201ENST00000452668 TIAM2Q8IVF5 1701 aa15.66■□□□□ 0.1
CHKB-CPT1B-201ENST00000452668 NBPF26B4DH59 902 aa15.66■□□□□ 0.1
CHKB-CPT1B-201ENST00000452668 NFE2L2Q16236 605 aa15.66■□□□□ 0.1
CHKB-CPT1B-201ENST00000452668 NBPF10Q6P3W6 841 aaKnown RBP15.66■□□□□ 0.1
CHKB-CPT1B-201ENST00000452668 NBPF15Q8N660 670 aa15.66■□□□□ 0.1
CHKB-CPT1B-201ENST00000452668 TMX4Q9H1E5 349 aaPredicted RBP15.66■□□□□ 0.1
CHKB-CPT1B-201ENST00000452668 ANKRD31Q8N7Z5 1873 aa15.65■□□□□ 0.1
CHKB-CPT1B-201ENST00000452668 ERVV-1B6SEH8 477 aa15.65■□□□□ 0.1
CHKB-CPT1B-201ENST00000452668 FKBP4Q02790 459 aaKnown RBP eCLIP15.65■□□□□ 0.1
CHKB-CPT1B-201ENST00000452668 CHADLQ6NUI6 762 aa15.65■□□□□ 0.1
CHKB-CPT1B-201ENST00000452668 JMYQ8N9B5 988 aa15.65■□□□□ 0.1
CHKB-CPT1B-201ENST00000452668 RPGRQ92834 1020 aaKnown RBP15.65■□□□□ 0.1
CHKB-CPT1B-201ENST00000452668 BCORQ6W2J9 1755 aa15.64■□□□□ 0.1
CHKB-CPT1B-201ENST00000452668 DDNO94850 711 aaPredicted RBP15.64■□□□□ 0.09
CHKB-CPT1B-201ENST00000452668 MYL6BP14649 208 aa15.64■□□□□ 0.09
CHKB-CPT1B-201ENST00000452668 CCDC88AQ3V6T2 1871 aa15.63■□□□□ 0.09
CHKB-CPT1B-201ENST00000452668 KLRG2A4D1S0 409 aaPredicted RBP15.63■□□□□ 0.09
CHKB-CPT1B-201ENST00000452668 EIF4A1P60842 406 aaKnown RBP15.63■□□□□ 0.09
CHKB-CPT1B-201ENST00000452668 LMOD3Q0VAK6 560 aa15.63■□□□□ 0.09
CHKB-CPT1B-201ENST00000452668 HLFQ16534 295 aa15.63■□□□□ 0.09
CHKB-CPT1B-201ENST00000452668 JDP2Q8WYK2 163 aa15.63■□□□□ 0.09
CHKB-CPT1B-201ENST00000452668 TSPYL4Q9UJ04 414 aa15.63■□□□□ 0.09
CHKB-CPT1B-201ENST00000452668 MAP3K15Q6ZN16 1313 aa15.63■□□□□ 0.09
CHKB-CPT1B-201ENST00000452668 COL11A2P13942 1736 aaPredicted RBP15.63■□□□□ 0.09
CHKB-CPT1B-201ENST00000452668 CC2D2BQ6DHV5 1058 aa15.62■□□□□ 0.09
CHKB-CPT1B-201ENST00000452668 ZNF277Q9NRM2 450 aaPredicted RBP15.62■□□□□ 0.09
CHKB-CPT1B-201ENST00000452668 FER1L6Q2WGJ9 1857 aa15.61■□□□□ 0.09
CHKB-CPT1B-201ENST00000452668 RALBP1Q15311 655 aa15.61■□□□□ 0.09
CHKB-CPT1B-201ENST00000452668 GRIPAP1Q4V328 841 aa15.61■□□□□ 0.09
CHKB-CPT1B-201ENST00000452668 PPP1R42Q7Z4L9 355 aa15.61■□□□□ 0.09
CHKB-CPT1B-201ENST00000452668 PLEKHF1Q96S99 279 aa15.61■□□□□ 0.09
CHKB-CPT1B-201ENST00000452668 THUMPD2Q9BTF0 503 aaKnown RBP15.61■□□□□ 0.09
CHKB-CPT1B-201ENST00000452668 ZBTB3Q9H5J0 574 aa15.61■□□□□ 0.09
CHKB-CPT1B-201ENST00000452668 CLEC11AQ9Y240 323 aa15.61■□□□□ 0.09
CHKB-CPT1B-201ENST00000452668 ERBB4Q15303 1308 aa15.61■□□□□ 0.09
CHKB-CPT1B-201ENST00000452668 SLX4Q8IY92 1834 aa15.6■□□□□ 0.09
CHKB-CPT1B-201ENST00000452668 POTECB2RU33 542 aa15.6■□□□□ 0.09
CHKB-CPT1B-201ENST00000452668 GPTP24298 496 aa15.6■□□□□ 0.09
CHKB-CPT1B-201ENST00000452668 IARSP41252 1262 aaKnown RBP15.6■□□□□ 0.09
CHKB-CPT1B-201ENST00000452668 RIPK4P57078 832 aa15.6■□□□□ 0.09
CHKB-CPT1B-201ENST00000452668 EAPPQ56P03 285 aaPredicted RBP15.6■□□□□ 0.09
CHKB-CPT1B-201ENST00000452668 LDHDQ86WU2 507 aa15.6■□□□□ 0.09
CHKB-CPT1B-201ENST00000452668 NUTM1Q86Y26 1132 aa15.6■□□□□ 0.09
CHKB-CPT1B-201ENST00000452668 SYNE4Q8N205 404 aa15.6■□□□□ 0.09
CHKB-CPT1B-201ENST00000452668 C7orf43Q8WVR3 580 aa15.6■□□□□ 0.09
CHKB-CPT1B-201ENST00000452668 RBM17Q96I25 401 aaKnown RBP15.6■□□□□ 0.09
CHKB-CPT1B-201ENST00000452668 HACL1Q9UJ83 578 aa15.6■□□□□ 0.09
CHKB-CPT1B-201ENST00000452668 EIF2S2P20042 333 aaKnown RBP15.59■□□□□ 0.09
CHKB-CPT1B-201ENST00000452668 EIF6P56537 245 aaKnown RBP15.59■□□□□ 0.09
CHKB-CPT1B-201ENST00000452668 L3MBTL3Q96JM7 780 aaPredicted RBP15.59■□□□□ 0.09
CHKB-CPT1B-201ENST00000452668 CREBZFQ9NS37 354 aa15.59■□□□□ 0.09
CHKB-CPT1B-201ENST00000452668 CACNA1SQ13698 1873 aa15.59■□□□□ 0.09
CHKB-CPT1B-201ENST00000452668 DICER1Q9UPY3 1922 aaKnown RBP15.58■□□□□ 0.09
CHKB-CPT1B-201ENST00000452668 PARP10Q53GL7 1025 aa15.58■□□□□ 0.08
CHKB-CPT1B-201ENST00000452668 TTLL7Q6ZT98 887 aa15.58■□□□□ 0.08
CHKB-CPT1B-201ENST00000452668 PNMA8AQ86V59 439 aaPredicted RBP15.58■□□□□ 0.08
CHKB-CPT1B-201ENST00000452668 TAF1DQ9H5J8 278 aaPredicted RBP15.58■□□□□ 0.08
CHKB-CPT1B-201ENST00000452668 LAMB4A4D0S4 1761 aa15.57■□□□□ 0.08
CHKB-CPT1B-201ENST00000452668 ARFGEF2Q9Y6D5 1785 aa15.57■□□□□ 0.08
CHKB-CPT1B-201ENST00000452668 LMOD1P29536 600 aaPredicted RBP15.57■□□□□ 0.08
CHKB-CPT1B-201ENST00000452668 GIGYF2Q6Y7W6 1299 aaKnown RBP15.57■□□□□ 0.08
CHKB-CPT1B-201ENST00000452668 TNS4Q8IZW8 715 aa15.57■□□□□ 0.08
CHKB-CPT1B-201ENST00000452668 NLRP3Q96P20 1036 aa15.57■□□□□ 0.08
CHKB-CPT1B-201ENST00000452668 PSMD1Q99460 953 aa15.57■□□□□ 0.08
CHKB-CPT1B-201ENST00000452668 BABAM1Q9NWV8 329 aa15.57■□□□□ 0.08
CHKB-CPT1B-201ENST00000452668 IBTKQ9P2D0 1353 aaPredicted RBP15.57■□□□□ 0.08
CHKB-CPT1B-201ENST00000452668 HSPA1AP0DMV8 641 aaKnown RBP15.56■□□□□ 0.08
CHKB-CPT1B-201ENST00000452668 HSPA1BP0DMV9 641 aaKnown RBP15.56■□□□□ 0.08
CHKB-CPT1B-201ENST00000452668 WDR43Q15061 677 aaKnown RBP eCLIP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms