RNA–Protein interactions for RNA: ENST00000451343.4

TNXB-203, Transcript of tenascin XB, humanhuman

TSL 1 (best) BASIC

Gene TNXB, Length 3,125 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-203ENST00000451343 TCHHQ07283 1943 aa13.87□□□□□ -0.19
TNXB-203ENST00000451343 POLA2Q14181 598 aa13.87□□□□□ -0.19
TNXB-203ENST00000451343 SETD1BQ9UPS6 1966 aaKnown RBP13.87□□□□□ -0.19
TNXB-203ENST00000451343 WDR33Q9C0J8 1336 aaKnown RBP13.87□□□□□ -0.19
TNXB-203ENST00000451343 LRRC37A3O60309 1634 aa13.86□□□□□ -0.19
TNXB-203ENST00000451343 FIBPO43427 364 aa13.86□□□□□ -0.19
TNXB-203ENST00000451343 PSME1Q06323 249 aa13.86□□□□□ -0.19
TNXB-203ENST00000451343 RNF216Q9NWF9 866 aaPredicted RBP13.86□□□□□ -0.19
TNXB-203ENST00000451343 FBXO3Q9UK99 471 aa13.86□□□□□ -0.19
TNXB-203ENST00000451343 PA2G4Q9UQ80 394 aaKnown RBP13.86□□□□□ -0.19
TNXB-203ENST00000451343 HS1BP3Q53T59 392 aa13.86□□□□□ -0.19
TNXB-203ENST00000451343 PROSER2Q86WR7 435 aaPredicted RBP13.86□□□□□ -0.19
TNXB-203ENST00000451343 ZNF142P52746 1687 aaPredicted RBP13.86□□□□□ -0.19
TNXB-203ENST00000451343 ZNF500O60304 480 aaPredicted RBP13.86□□□□□ -0.19
TNXB-203ENST00000451343 NBPF6Q5VWK0 638 aa13.86□□□□□ -0.19
TNXB-203ENST00000451343 DNAAF4Q8WXU2 420 aa13.86□□□□□ -0.19
TNXB-203ENST00000451343 LRRC59Q96AG4 307 aaKnown RBP13.86□□□□□ -0.19
TNXB-203ENST00000451343 KIF1BPQ96EK5 621 aa13.86□□□□□ -0.19
TNXB-203ENST00000451343 NBPF4Q96M43 638 aa13.86□□□□□ -0.19
TNXB-203ENST00000451343 ARID3AQ99856 593 aa13.86□□□□□ -0.19
TNXB-203ENST00000451343 CASTP20810 708 aaKnown RBP13.85□□□□□ -0.19
TNXB-203ENST00000451343 EIF4A1P60842 406 aaKnown RBP13.85□□□□□ -0.19
TNXB-203ENST00000451343 PTH1RQ03431 593 aa13.85□□□□□ -0.19
TNXB-203ENST00000451343 BEND3Q5T5X7 828 aa13.85□□□□□ -0.19
TNXB-203ENST00000451343 TTC14Q96N46 770 aa13.85□□□□□ -0.19
TNXB-203ENST00000451343 USP25Q9UHP3 1055 aa13.85□□□□□ -0.19
TNXB-203ENST00000451343 PHF8Q9UPP1 1060 aa13.85□□□□□ -0.19
TNXB-203ENST00000451343 COL9A3Q14050 684 aaPredicted RBP13.85□□□□□ -0.19
TNXB-203ENST00000451343 ADCK5Q3MIX3 580 aa13.85□□□□□ -0.19
TNXB-203ENST00000451343 MPRIPQ6WCQ1 1025 aa13.85□□□□□ -0.19
TNXB-203ENST00000451343 AOX1Q06278 1338 aa13.85□□□□□ -0.19
TNXB-203ENST00000451343 RAB11FIP3O75154 756 aa13.84□□□□□ -0.19
TNXB-203ENST00000451343 SYT1P21579 422 aa13.84□□□□□ -0.19
TNXB-203ENST00000451343 CCDC83Q8IWF9 413 aa13.84□□□□□ -0.19
TNXB-203ENST00000451343 CNTROBQ8N137 903 aa13.84□□□□□ -0.19
TNXB-203ENST00000451343 DDX17Q92841 729 aaKnown RBP13.84□□□□□ -0.19
TNXB-203ENST00000451343 FAM13BQ9NYF5 915 aa13.84□□□□□ -0.19
TNXB-203ENST00000451343 CCDC39Q9UFE4 941 aa13.84□□□□□ -0.19
TNXB-203ENST00000451343 PRAMEF22A3QJZ6 481 aa13.84□□□□□ -0.19
TNXB-203ENST00000451343 ZHX1Q9UKY1 873 aaPredicted RBP13.84□□□□□ -0.19
TNXB-203ENST00000451343 HCLS1P14317 486 aaPredicted RBP13.84□□□□□ -0.19
TNXB-203ENST00000451343 PROSER3Q2NL68 480 aa13.84□□□□□ -0.19
TNXB-203ENST00000451343 SYAP1Q96A49 352 aaPredicted RBP13.84□□□□□ -0.19
TNXB-203ENST00000451343 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.84□□□□□ -0.19
TNXB-203ENST00000451343 UQCRHLA0A096LP55 91 aa13.83□□□□□ -0.2
TNXB-203ENST00000451343 UQCRHP07919 91 aa13.83□□□□□ -0.2
TNXB-203ENST00000451343 ZSCAN22P10073 491 aaPredicted RBP13.83□□□□□ -0.2
TNXB-203ENST00000451343 PRPF40BQ6NWY9 871 aaKnown RBP13.83□□□□□ -0.2
TNXB-203ENST00000451343 C17orf53Q8N3J3 647 aaPredicted RBP13.83□□□□□ -0.2
TNXB-203ENST00000451343 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.83□□□□□ -0.2
TNXB-203ENST00000451343 CWF19L2Q2TBE0 894 aaKnown RBP13.83□□□□□ -0.2
TNXB-203ENST00000451343 JAKMIP1Q96N16 626 aaKnown RBP13.83□□□□□ -0.2
TNXB-203ENST00000451343 DIAPH3Q9NSV4 1193 aa13.83□□□□□ -0.2
TNXB-203ENST00000451343 SMC3Q9UQE7 1217 aa13.83□□□□□ -0.2
TNXB-203ENST00000451343 STX6O43752 255 aa13.82□□□□□ -0.2
TNXB-203ENST00000451343 NECAB1Q8N987 351 aa13.82□□□□□ -0.2
TNXB-203ENST00000451343 IL17RAQ96F46 866 aa13.82□□□□□ -0.2
TNXB-203ENST00000451343 LIMCH1Q9UPQ0 1083 aa13.82□□□□□ -0.2
TNXB-203ENST00000451343 PXDNLA1KZ92 1463 aa13.82□□□□□ -0.2
TNXB-203ENST00000451343 ADCY9O60503 1353 aa13.82□□□□□ -0.2
TNXB-203ENST00000451343 PLCB2Q00722 1185 aa13.82□□□□□ -0.2
TNXB-203ENST00000451343 JARID2Q92833 1246 aaPredicted RBP13.81□□□□□ -0.2
TNXB-203ENST00000451343 DNM1Q05193 864 aaKnown RBP13.81□□□□□ -0.2
TNXB-203ENST00000451343 TEFQ10587 303 aa13.81□□□□□ -0.2
TNXB-203ENST00000451343 ZNF530Q6P9A1 599 aaPredicted RBP13.81□□□□□ -0.2
TNXB-203ENST00000451343 TCEANC2Q96MN5 208 aa13.81□□□□□ -0.2
TNXB-203ENST00000451343 BTBD11A6QL63 1104 aa13.81□□□□□ -0.2
TNXB-203ENST00000451343 GIMAP6Q6P9H5 292 aa13.81□□□□□ -0.2
TNXB-203ENST00000451343 MAP3K2Q9Y2U5 619 aa13.81□□□□□ -0.2
TNXB-203ENST00000451343 VPS37CA5D8V6 355 aaPredicted RBP13.8□□□□□ -0.2
TNXB-203ENST00000451343 F13A1P00488 732 aa13.8□□□□□ -0.2
TNXB-203ENST00000451343 GJB2P29033 226 aa13.8□□□□□ -0.2
TNXB-203ENST00000451343 TTC12Q9H892 705 aaPredicted RBP13.8□□□□□ -0.2
TNXB-203ENST00000451343 CHMP3Q9Y3E7 222 aa13.8□□□□□ -0.2
TNXB-203ENST00000451343 ST3GAL1Q11201 340 aa13.8□□□□□ -0.2
TNXB-203ENST00000451343 TMEM51Q9NW97 253 aa13.8□□□□□ -0.2
TNXB-203ENST00000451343 HYPKQ9NX55 129 aa13.8□□□□□ -0.2
TNXB-203ENST00000451343 C9orf78Q9NZ63 289 aaPredicted RBP13.8□□□□□ -0.2
TNXB-203ENST00000451343 CCDC183Q5T5S1 534 aa13.79□□□□□ -0.2
TNXB-203ENST00000451343 FAM173BQ6P4H8 233 aa13.79□□□□□ -0.2
TNXB-203ENST00000451343 FAM227BQ96M60 508 aa13.79□□□□□ -0.2
TNXB-203ENST00000451343 PDCL3Q9H2J4 239 aa13.79□□□□□ -0.2
TNXB-203ENST00000451343 CEMIPQ8WUJ3 1361 aa13.79□□□□□ -0.2
TNXB-203ENST00000451343 MARF1Q9Y4F3 1742 aaKnown RBP13.79□□□□□ -0.2
TNXB-203ENST00000451343 GLRX3O76003 335 aaKnown RBP13.79□□□□□ -0.2
TNXB-203ENST00000451343 PHF14O94880 888 aa13.79□□□□□ -0.2
TNXB-203ENST00000451343 CLASRPQ8N2M8 674 aaKnown RBP13.79□□□□□ -0.2
TNXB-203ENST00000451343 PDRG1Q9NUG6 133 aa13.79□□□□□ -0.2
TNXB-203ENST00000451343 ADCY5O95622 1261 aa13.79□□□□□ -0.2
TNXB-203ENST00000451343 AIMP1Q12904 312 aaKnown RBP13.79□□□□□ -0.2
TNXB-203ENST00000451343 FERMT3Q86UX7 667 aa13.79□□□□□ -0.2
TNXB-203ENST00000451343 AACSQ86V21 672 aa13.79□□□□□ -0.2
TNXB-203ENST00000451343 CCDC8Q9H0W5 538 aaPredicted RBP13.79□□□□□ -0.2
TNXB-203ENST00000451343 IFIT2P09913 472 aaKnown RBP13.78□□□□□ -0.2
TNXB-203ENST00000451343 SIL1Q9H173 461 aa13.78□□□□□ -0.2
TNXB-203ENST00000451343 BABAM1Q9NWV8 329 aa13.78□□□□□ -0.2
TNXB-203ENST00000451343 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.78□□□□□ -0.2
TNXB-203ENST00000451343 KLHDC4Q8TBB5 520 aa13.78□□□□□ -0.2
TNXB-203ENST00000451343 IP6K1Q92551 441 aa13.78□□□□□ -0.2
TNXB-203ENST00000451343 TSC1Q92574 1164 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms