RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 STAP2Q9UGK3 403 aa8.29□□□□□ -1.08
USP46-202ENST00000451218 NOP58Q9Y2X3 529 aaKnown RBP8.29□□□□□ -1.08
USP46-202ENST00000451218 TNRC6CQ9HCJ0 1690 aaKnown RBP8.29□□□□□ -1.08
USP46-202ENST00000451218 ERVV-2B6SEH9 535 aa8.28□□□□□ -1.08
USP46-202ENST00000451218 ABCB7O75027 752 aa8.28□□□□□ -1.08
USP46-202ENST00000451218 UNC5CLQ8IV45 518 aa8.28□□□□□ -1.08
USP46-202ENST00000451218 DBF4Q9UBU7 674 aaPredicted RBP8.28□□□□□ -1.08
USP46-202ENST00000451218 IL2RBP14784 551 aa8.28□□□□□ -1.08
USP46-202ENST00000451218 PIP4K2AP48426 406 aaPredicted RBP8.28□□□□□ -1.08
USP46-202ENST00000451218 TPRNQ4KMQ1 711 aa8.28□□□□□ -1.08
USP46-202ENST00000451218 TBC1D9Q6ZT07 1266 aa8.28□□□□□ -1.08
USP46-202ENST00000451218 DNAAF4Q8WXU2 420 aa8.28□□□□□ -1.08
USP46-202ENST00000451218 SPG7Q9UQ90 795 aa8.28□□□□□ -1.08
USP46-202ENST00000451218 NBR1Q14596 966 aa8.28□□□□□ -1.08
USP46-202ENST00000451218 KSR2Q6VAB6 950 aa8.28□□□□□ -1.08
USP46-202ENST00000451218 BTG4Q9NY30 223 aa8.28□□□□□ -1.08
USP46-202ENST00000451218 MAP3K2Q9Y2U5 619 aa8.28□□□□□ -1.08
USP46-202ENST00000451218 ECM2O94769 699 aaPredicted RBP8.28□□□□□ -1.08
USP46-202ENST00000451218 C1orf141Q5JVX7 400 aa8.28□□□□□ -1.08
USP46-202ENST00000451218 ZCRB1Q8TBF4 217 aaKnown RBP8.28□□□□□ -1.08
USP46-202ENST00000451218 PIGBQ92521 554 aa8.28□□□□□ -1.08
USP46-202ENST00000451218 PRDM11Q9NQV5 511 aa8.28□□□□□ -1.08
USP46-202ENST00000451218 NEURL1BA8MQ27 555 aa8.27□□□□□ -1.09
USP46-202ENST00000451218 PLCB2Q00722 1185 aa8.27□□□□□ -1.09
USP46-202ENST00000451218 FKBP5Q13451 457 aaPredicted RBP8.27□□□□□ -1.09
USP46-202ENST00000451218 RABL6Q3YEC7 729 aaPredicted RBP8.27□□□□□ -1.09
USP46-202ENST00000451218 SUCLG2Q96I99 432 aa8.27□□□□□ -1.09
USP46-202ENST00000451218 ATG3Q9NT62 314 aa8.27□□□□□ -1.09
USP46-202ENST00000451218 JCADQ9P266 1359 aa8.27□□□□□ -1.09
USP46-202ENST00000451218 SPATA31A5Q5VU36 1347 aa8.27□□□□□ -1.09
USP46-202ENST00000451218 SPATA31A7Q8IWB4 1347 aa8.27□□□□□ -1.09
USP46-202ENST00000451218 RAPGEF4Q8WZA2 1011 aa8.26□□□□□ -1.09
USP46-202ENST00000451218 ZNF219Q9P2Y4 722 aaPredicted RBP8.26□□□□□ -1.09
USP46-202ENST00000451218 LTBP1Q14766 1721 aa8.26□□□□□ -1.09
USP46-202ENST00000451218 ANKRD45Q5TZF3 282 aa8.26□□□□□ -1.09
USP46-202ENST00000451218 TNS1Q9HBL0 1735 aaKnown RBP8.26□□□□□ -1.09
USP46-202ENST00000451218 TULP1O00294 542 aaPredicted RBP8.26□□□□□ -1.09
USP46-202ENST00000451218 GNAI2P04899 355 aa8.26□□□□□ -1.09
USP46-202ENST00000451218 TEFQ10587 303 aa8.26□□□□□ -1.09
USP46-202ENST00000451218 EIF2S2P20042 333 aaKnown RBP8.26□□□□□ -1.09
USP46-202ENST00000451218 SDSP20132 328 aa8.26□□□□□ -1.09
USP46-202ENST00000451218 FOXO4P98177 505 aa8.26□□□□□ -1.09
USP46-202ENST00000451218 TSHZ3Q63HK5 1081 aa8.26□□□□□ -1.09
USP46-202ENST00000451218 ANP32EQ9BTT0 268 aa8.26□□□□□ -1.09
USP46-202ENST00000451218 EXOC6BQ9Y2D4 811 aa8.26□□□□□ -1.09
USP46-202ENST00000451218 KIAA1551Q9HCM1 1747 aa8.25□□□□□ -1.09
USP46-202ENST00000451218 SASH1O94885 1247 aa8.25□□□□□ -1.09
USP46-202ENST00000451218 VASPP50552 380 aaPredicted RBP8.25□□□□□ -1.09
USP46-202ENST00000451218 PDE1AP54750 535 aa8.25□□□□□ -1.09
USP46-202ENST00000451218 PPP1R42Q7Z4L9 355 aa8.25□□□□□ -1.09
USP46-202ENST00000451218 ASAP1Q9ULH1 1129 aa8.25□□□□□ -1.09
USP46-202ENST00000451218 SLC4A3P48751 1232 aa8.25□□□□□ -1.09
USP46-202ENST00000451218 SLC4A10Q6U841 1118 aa8.25□□□□□ -1.09
USP46-202ENST00000451218 HYPKQ9NX55 129 aa8.25□□□□□ -1.09
USP46-202ENST00000451218 ECM29Q5VYK3 1845 aa8.25□□□□□ -1.09
USP46-202ENST00000451218 UTRNP46939 3433 aa8.25□□□□□ -1.09
USP46-202ENST00000451218 XAGE3Q8WTP9 111 aa8.25□□□□□ -1.09
USP46-202ENST00000451218 METTL22Q9BUU2 404 aaPredicted RBP8.25□□□□□ -1.09
USP46-202ENST00000451218 RIC1Q4ADV7 1423 aa8.24□□□□□ -1.09
USP46-202ENST00000451218 ALDH1L1O75891 902 aa8.24□□□□□ -1.09
USP46-202ENST00000451218 GCKRQ14397 625 aa8.24□□□□□ -1.09
USP46-202ENST00000451218 TTLL7Q6ZT98 887 aa8.24□□□□□ -1.09
USP46-202ENST00000451218 TBC1D2Q9BYX2 928 aa8.24□□□□□ -1.09
USP46-202ENST00000451218 NRXN2Q9P2S2 1712 aa8.24□□□□□ -1.09
USP46-202ENST00000451218 MYT1Q01538 1121 aa8.24□□□□□ -1.09
USP46-202ENST00000451218 TOM1L2Q6ZVM7 507 aa8.24□□□□□ -1.09
USP46-202ENST00000451218 MARCH10Q8NA82 808 aaPredicted RBP8.24□□□□□ -1.09
USP46-202ENST00000451218 STK31Q9BXU1 1019 aa8.24□□□□□ -1.09
USP46-202ENST00000451218 SNRPA1P09661 255 aaKnown RBP8.24□□□□□ -1.09
USP46-202ENST00000451218 COL9A3Q14050 684 aaPredicted RBP8.24□□□□□ -1.09
USP46-202ENST00000451218 PTF1AQ7RTS3 328 aa8.24□□□□□ -1.09
USP46-202ENST00000451218 BICC1Q9H694 974 aaKnown RBP8.24□□□□□ -1.09
USP46-202ENST00000451218 ERBB4Q15303 1308 aa8.24□□□□□ -1.09
USP46-202ENST00000451218 ERICH6Q7L0X2 663 aa8.23□□□□□ -1.09
USP46-202ENST00000451218 COPS6Q7L5N1 327 aa8.23□□□□□ -1.09
USP46-202ENST00000451218 LINS1Q8NG48 757 aa8.23□□□□□ -1.09
USP46-202ENST00000451218 SRCIN1Q9C0H9 1055 aa8.23□□□□□ -1.09
USP46-202ENST00000451218 MYH15Q9Y2K3 1946 aa8.23□□□□□ -1.09
USP46-202ENST00000451218 AOX1Q06278 1338 aa8.23□□□□□ -1.09
USP46-202ENST00000451218 RGPD3A6NKT7 1758 aaPredicted RBP8.22□□□□□ -1.09
USP46-202ENST00000451218 RGPD4Q7Z3J3 1758 aa8.22□□□□□ -1.09
USP46-202ENST00000451218 ATRNO75882 1429 aa8.22□□□□□ -1.09
USP46-202ENST00000451218 H7C1W4 665 aa8.22□□□□□ -1.09
USP46-202ENST00000451218 A1BGP04217 495 aa8.22□□□□□ -1.09
USP46-202ENST00000451218 BARGINQ6ZT62 677 aa8.22□□□□□ -1.09
USP46-202ENST00000451218 FMNL2Q96PY5 1086 aa8.22□□□□□ -1.09
USP46-202ENST00000451218 TLR7Q9NYK1 1049 aaKnown RBP8.22□□□□□ -1.09
USP46-202ENST00000451218 LRRC37AA6NMS7 1700 aa8.22□□□□□ -1.09
USP46-202ENST00000451218 GNAI3P08754 354 aa8.22□□□□□ -1.09
USP46-202ENST00000451218 ISCA1Q9BUE6 129 aa8.22□□□□□ -1.09
USP46-202ENST00000451218 USP26Q9BXU7 913 aa8.22□□□□□ -1.09
USP46-202ENST00000451218 SNRKQ9NRH2 765 aa8.22□□□□□ -1.09
USP46-202ENST00000451218 GRM8O00222 908 aa8.22□□□□□ -1.09
USP46-202ENST00000451218 CYP19A1P11511 503 aaPredicted RBP8.22□□□□□ -1.09
USP46-202ENST00000451218 VSIG10Q8N0Z9 540 aa8.22□□□□□ -1.09
USP46-202ENST00000451218 FNBP4Q8N3X1 1017 aaPredicted RBP8.22□□□□□ -1.09
USP46-202ENST00000451218 PA2G4Q9UQ80 394 aaKnown RBP8.22□□□□□ -1.09
USP46-202ENST00000451218 PTPN12Q05209 780 aaKnown RBP8.22□□□□□ -1.09
USP46-202ENST00000451218 AMIGO3Q86WK7 504 aa8.22□□□□□ -1.09
USP46-202ENST00000451218 STRN4Q9NRL3 753 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms