RNA–Protein interactions for RNA: ENST00000450198.6

SMARCA2-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCA2, Length 5,602 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-214ENST00000450198 PHACTR2O75167 634 aa16.71■□□□□ 0.27
SMARCA2-214ENST00000450198 PRC1O43663 620 aa16.71■□□□□ 0.27
SMARCA2-214ENST00000450198 DYDC1Q8WWB3 177 aa16.71■□□□□ 0.27
SMARCA2-214ENST00000450198 RTCBQ9Y3I0 505 aaKnown RBP16.71■□□□□ 0.27
SMARCA2-214ENST00000450198 CCDC172P0C7W6 258 aa16.71■□□□□ 0.27
SMARCA2-214ENST00000450198 GPHNQ9NQX3 736 aaPredicted RBP16.71■□□□□ 0.26
SMARCA2-214ENST00000450198 C9orf84Q5VXU9 1444 aa16.7■□□□□ 0.26
SMARCA2-214ENST00000450198 TCERG1LQ5VWI1 586 aa16.7■□□□□ 0.26
SMARCA2-214ENST00000450198 CAVIN1Q6NZI2 390 aaKnown RBP16.7■□□□□ 0.26
SMARCA2-214ENST00000450198 HOOK2Q96ED9 719 aa16.7■□□□□ 0.26
SMARCA2-214ENST00000450198 IMPG2Q9BZV3 1241 aa16.7■□□□□ 0.26
SMARCA2-214ENST00000450198 RSPH6AQ9H0K4 717 aa16.7■□□□□ 0.26
SMARCA2-214ENST00000450198 FAM43AQ8N2R8 423 aa16.7■□□□□ 0.26
SMARCA2-214ENST00000450198 SREK1Q8WXA9 508 aaKnown RBP16.7■□□□□ 0.26
SMARCA2-214ENST00000450198 PDZRN3Q9UPQ7 1066 aa16.7■□□□□ 0.26
SMARCA2-214ENST00000450198 CCDC40Q4G0X9 1142 aa16.69■□□□□ 0.26
SMARCA2-214ENST00000450198 GCOM1H8Y6P7 765 aaPredicted RBP16.69■□□□□ 0.26
SMARCA2-214ENST00000450198 MYZAPP0CAP1 466 aa16.69■□□□□ 0.26
SMARCA2-214ENST00000450198 TPTE2Q6XPS3 522 aa16.69■□□□□ 0.26
SMARCA2-214ENST00000450198 TNPO1Q92973 898 aaKnown RBP16.68■□□□□ 0.26
SMARCA2-214ENST00000450198 USHBP1Q8N6Y0 703 aa16.68■□□□□ 0.26
SMARCA2-214ENST00000450198 C8orf76Q96K31 380 aa16.68■□□□□ 0.26
SMARCA2-214ENST00000450198 TCHPQ9BT92 498 aa16.68■□□□□ 0.26
SMARCA2-214ENST00000450198 IL27Q8NEV9 243 aa16.68■□□□□ 0.26
SMARCA2-214ENST00000450198 IVNS1ABPQ9Y6Y0 642 aa16.68■□□□□ 0.26
SMARCA2-214ENST00000450198 USO1O60763 962 aaKnown RBP16.68■□□□□ 0.26
SMARCA2-214ENST00000450198 PLCG2P16885 1265 aa16.68■□□□□ 0.26
SMARCA2-214ENST00000450198 EIF6P56537 245 aaKnown RBP16.68■□□□□ 0.26
SMARCA2-214ENST00000450198 MAP2K1Q02750 393 aaPredicted RBP16.68■□□□□ 0.26
SMARCA2-214ENST00000450198 TCIRG1Q13488 830 aa16.68■□□□□ 0.26
SMARCA2-214ENST00000450198 RAB3IL1Q8TBN0 382 aa16.68■□□□□ 0.26
SMARCA2-214ENST00000450198 DNAAF4Q8WXU2 420 aa16.68■□□□□ 0.26
SMARCA2-214ENST00000450198 SH2D4AQ9H788 454 aa16.68■□□□□ 0.26
SMARCA2-214ENST00000450198 TSPY3P0CV98 308 aa16.67■□□□□ 0.26
SMARCA2-214ENST00000450198 TSPY8P0CW00 308 aa16.67■□□□□ 0.26
SMARCA2-214ENST00000450198 ARHGEF6Q15052 776 aa16.67■□□□□ 0.26
SMARCA2-214ENST00000450198 DDX12PQ92771 950 aa16.67■□□□□ 0.26
SMARCA2-214ENST00000450198 NUP62CLQ9H1M0 184 aa16.67■□□□□ 0.26
SMARCA2-214ENST00000450198 ZNF408Q9H9D4 720 aa16.67■□□□□ 0.26
SMARCA2-214ENST00000450198 GJA3Q9Y6H8 435 aa16.67■□□□□ 0.26
SMARCA2-214ENST00000450198 IDEP14735 1019 aa16.67■□□□□ 0.26
SMARCA2-214ENST00000450198 FAM114A1Q8IWE2 563 aa16.67■□□□□ 0.26
SMARCA2-214ENST00000450198 ZCRB1Q8TBF4 217 aaKnown RBP16.67■□□□□ 0.26
SMARCA2-214ENST00000450198 BOLA2Q9H3K6 86 aa16.67■□□□□ 0.26
SMARCA2-214ENST00000450198 TAF3Q5VWG9 929 aa16.67■□□□□ 0.26
SMARCA2-214ENST00000450198 LUZP1Q86V48 1076 aa16.67■□□□□ 0.26
SMARCA2-214ENST00000450198 DDX11Q96FC9 970 aa16.67■□□□□ 0.26
SMARCA2-214ENST00000450198 SNRPA1P09661 255 aaKnown RBP16.66■□□□□ 0.26
SMARCA2-214ENST00000450198 KIF22Q14807 665 aa16.66■□□□□ 0.26
SMARCA2-214ENST00000450198 TDRD12Q587J7 1177 aaKnown RBP16.66■□□□□ 0.26
SMARCA2-214ENST00000450198 NUTM1Q86Y26 1132 aa16.66■□□□□ 0.26
SMARCA2-214ENST00000450198 SMARCC2Q8TAQ2 1214 aa16.66■□□□□ 0.26
SMARCA2-214ENST00000450198 ACSBG1Q96GR2 724 aa16.66■□□□□ 0.26
SMARCA2-214ENST00000450198 F8W031 263 aaPredicted RBP16.66■□□□□ 0.26
SMARCA2-214ENST00000450198 MFSD6Q6ZSS7 791 aa16.66■□□□□ 0.26
SMARCA2-214ENST00000450198 ARL1P40616 181 aaPredicted RBP16.66■□□□□ 0.26
SMARCA2-214ENST00000450198 CFAP100Q494V2 611 aa16.66■□□□□ 0.26
SMARCA2-214ENST00000450198 DDX23Q9BUQ8 820 aaKnown RBP16.66■□□□□ 0.26
SMARCA2-214ENST00000450198 BAG6P46379 1132 aa16.66■□□□□ 0.26
SMARCA2-214ENST00000450198 MRE11P49959 708 aa16.66■□□□□ 0.26
SMARCA2-214ENST00000450198 NBPF7P0C2Y1 421 aaPredicted RBP16.66■□□□□ 0.26
SMARCA2-214ENST00000450198 TMOD4Q9NZQ9 345 aa16.66■□□□□ 0.26
SMARCA2-214ENST00000450198 CASTP20810 708 aaKnown RBP16.65■□□□□ 0.26
SMARCA2-214ENST00000450198 CEBPAP49715 358 aaPredicted RBP16.65■□□□□ 0.26
SMARCA2-214ENST00000450198 BMS1Q14692 1282 aaKnown RBP16.65■□□□□ 0.26
SMARCA2-214ENST00000450198 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.65■□□□□ 0.26
SMARCA2-214ENST00000450198 C6orf50Q9HD87 102 aa16.65■□□□□ 0.26
SMARCA2-214ENST00000450198 LMTK3Q96Q04 1460 aa16.65■□□□□ 0.26
SMARCA2-214ENST00000450198 GNAQP50148 359 aa16.65■□□□□ 0.26
SMARCA2-214ENST00000450198 CCDC113Q9H0I3 377 aa16.65■□□□□ 0.26
SMARCA2-214ENST00000450198 KRT13P13646 458 aa16.65■□□□□ 0.26
SMARCA2-214ENST00000450198 PLVAPQ9BX97 442 aa16.65■□□□□ 0.26
SMARCA2-214ENST00000450198 PICK1Q9NRD5 415 aa16.65■□□□□ 0.26
SMARCA2-214ENST00000450198 GPR162Q16538 588 aa16.65■□□□□ 0.26
SMARCA2-214ENST00000450198 FAM177A1Q8N128 213 aaPredicted RBP16.65■□□□□ 0.26
SMARCA2-214ENST00000450198 OTUD6BQ8N6M0 293 aa16.65■□□□□ 0.26
SMARCA2-214ENST00000450198 LRRC59Q96AG4 307 aaKnown RBP16.65■□□□□ 0.26
SMARCA2-214ENST00000450198 STX8Q9UNK0 236 aa16.65■□□□□ 0.26
SMARCA2-214ENST00000450198 NDC80O14777 642 aa16.64■□□□□ 0.26
SMARCA2-214ENST00000450198 UBA7P41226 1012 aa16.64■□□□□ 0.26
SMARCA2-214ENST00000450198 WAPLQ7Z5K2 1190 aa16.64■□□□□ 0.26
SMARCA2-214ENST00000450198 UQCRHP07919 91 aa16.64■□□□□ 0.25
SMARCA2-214ENST00000450198 SMC1AQ14683 1233 aaKnown RBP16.64■□□□□ 0.25
SMARCA2-214ENST00000450198 SPC24Q8NBT2 197 aa16.64■□□□□ 0.25
SMARCA2-214ENST00000450198 MSANTD4Q8NCY6 345 aa16.64■□□□□ 0.25
SMARCA2-214ENST00000450198 NCOA2Q15596 1464 aa16.64■□□□□ 0.25
SMARCA2-214ENST00000450198 FSD2A1L4K1 749 aa16.64■□□□□ 0.25
SMARCA2-214ENST00000450198 ANKRD24Q8TF21 1146 aa16.64■□□□□ 0.25
SMARCA2-214ENST00000450198 ALS2CR12Q96Q35 445 aa16.64■□□□□ 0.25
SMARCA2-214ENST00000450198 WIZO95785 1651 aa16.64■□□□□ 0.25
SMARCA2-214ENST00000450198 MTIF2P46199 727 aaKnown RBP16.64■□□□□ 0.25
SMARCA2-214ENST00000450198 NAIPQ13075 1403 aa16.64■□□□□ 0.25
SMARCA2-214ENST00000450198 TTC21BQ7Z4L5 1316 aa16.64■□□□□ 0.25
SMARCA2-214ENST00000450198 PDE6BP35913 854 aa16.64■□□□□ 0.25
SMARCA2-214ENST00000450198 NOC2LQ9Y3T9 749 aaKnown RBP16.64■□□□□ 0.25
SMARCA2-214ENST00000450198 IKBKGQ9Y6K9 419 aa16.64■□□□□ 0.25
SMARCA2-214ENST00000450198 FAM193AP78312 1265 aa16.63■□□□□ 0.25
SMARCA2-214ENST00000450198 CHD1LQ86WJ1 897 aa16.63■□□□□ 0.25
SMARCA2-214ENST00000450198 TBC1D5Q92609 795 aa16.63■□□□□ 0.25
SMARCA2-214ENST00000450198 RBM27Q9P2N5 1060 aaKnown RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms