RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 LMNB1P20700 586 aa19.11■□□□□ 0.65
USP39-206ENST00000448971 TTLL6Q8N841 843 aa19.11■□□□□ 0.65
USP39-206ENST00000448971 GLTPD2A6NH11 291 aa19.1■□□□□ 0.65
USP39-206ENST00000448971 STARD3NLO95772 234 aa19.1■□□□□ 0.65
USP39-206ENST00000448971 EIF5P55010 431 aaKnown RBP19.1■□□□□ 0.65
USP39-206ENST00000448971 SMC1BQ8NDV3 1235 aa19.1■□□□□ 0.65
USP39-206ENST00000448971 TNRC6CQ9HCJ0 1690 aaKnown RBP19.1■□□□□ 0.65
USP39-206ENST00000448971 CANXP27824 592 aaKnown RBP19.09■□□□□ 0.65
USP39-206ENST00000448971 MIS18AQ9NYP9 233 aa19.09■□□□□ 0.65
USP39-206ENST00000448971 CCDC88AQ3V6T2 1871 aa19.09■□□□□ 0.65
USP39-206ENST00000448971 VEGFAP15692 232 aaPredicted RBP19.08■□□□□ 0.64
USP39-206ENST00000448971 COL13A1Q5TAT6 717 aaPredicted RBP19.08■□□□□ 0.64
USP39-206ENST00000448971 C2CD5Q86YS7 1000 aa19.08■□□□□ 0.64
USP39-206ENST00000448971 TEX13AQ9BXU3 409 aaPredicted RBP19.08■□□□□ 0.64
USP39-206ENST00000448971 LAMB4A4D0S4 1761 aa19.08■□□□□ 0.64
USP39-206ENST00000448971 DLEC1Q9Y238 1755 aa19.08■□□□□ 0.64
USP39-206ENST00000448971 CARMIL3Q8ND23 1372 aa19.07■□□□□ 0.64
USP39-206ENST00000448971 H0YIN7 160 aa19.07■□□□□ 0.64
USP39-206ENST00000448971 NFKBIEO00221 500 aa19.07■□□□□ 0.64
USP39-206ENST00000448971 TSPYL4Q9UJ04 414 aa19.07■□□□□ 0.64
USP39-206ENST00000448971 ZNF330Q9Y3S2 320 aaPredicted RBP19.07■□□□□ 0.64
USP39-206ENST00000448971 POTECB2RU33 542 aa19.06■□□□□ 0.64
USP39-206ENST00000448971 APAF1O14727 1248 aa19.06■□□□□ 0.64
USP39-206ENST00000448971 SNRPA1P09661 255 aaKnown RBP19.06■□□□□ 0.64
USP39-206ENST00000448971 TBC1D9BQ66K14 1250 aa19.05■□□□□ 0.64
USP39-206ENST00000448971 BICDL1Q6ZP65 573 aa19.05■□□□□ 0.64
USP39-206ENST00000448971 A0A087WZG4 1122 aa19.04■□□□□ 0.64
USP39-206ENST00000448971 PRAMEF22A3QJZ6 481 aa19.04■□□□□ 0.64
USP39-206ENST00000448971 NPM2Q86SE8 214 aaKnown RBP19.04■□□□□ 0.64
USP39-206ENST00000448971 BRIP1Q9BX63 1249 aa19.03■□□□□ 0.64
USP39-206ENST00000448971 TRIM35Q9UPQ4 493 aa19.03■□□□□ 0.64
USP39-206ENST00000448971 LAS1LQ9Y4W2 734 aaKnown RBP19.03■□□□□ 0.64
USP39-206ENST00000448971 ANKRD31Q8N7Z5 1873 aa19.03■□□□□ 0.64
USP39-206ENST00000448971 SCN7AQ01118 1682 aa19.02■□□□□ 0.64
USP39-206ENST00000448971 TBC1D2BQ9UPU7 963 aa19.02■□□□□ 0.64
USP39-206ENST00000448971 USP16Q9Y5T5 823 aa19.02■□□□□ 0.64
USP39-206ENST00000448971 A1BGP04217 495 aa19.01■□□□□ 0.63
USP39-206ENST00000448971 EIF4A1P60842 406 aaKnown RBP19.01■□□□□ 0.63
USP39-206ENST00000448971 PRR5LQ6MZQ0 368 aa19.01■□□□□ 0.63
USP39-206ENST00000448971 PDZRN3Q9UPQ7 1066 aa19.01■□□□□ 0.63
USP39-206ENST00000448971 C21orf2O43822 256 aa19■□□□□ 0.63
USP39-206ENST00000448971 PDE6BP35913 854 aa19■□□□□ 0.63
USP39-206ENST00000448971 IL6STP40189 918 aaPredicted RBP19■□□□□ 0.63
USP39-206ENST00000448971 PIP4K2AP48426 406 aaPredicted RBP19■□□□□ 0.63
USP39-206ENST00000448971 FAM9BQ8IZU0 186 aa19■□□□□ 0.63
USP39-206ENST00000448971 CCDC24Q8N4L8 307 aa19■□□□□ 0.63
USP39-206ENST00000448971 ZNF622Q969S3 477 aaKnown RBP eCLIP19■□□□□ 0.63
USP39-206ENST00000448971 BABAM1Q9NWV8 329 aa19■□□□□ 0.63
USP39-206ENST00000448971 FER1L6Q2WGJ9 1857 aa18.99■□□□□ 0.63
USP39-206ENST00000448971 DPY19L2Q6NUT2 758 aa18.99■□□□□ 0.63
USP39-206ENST00000448971 DICER1Q9UPY3 1922 aaKnown RBP18.99■□□□□ 0.63
USP39-206ENST00000448971 TIAM2Q8IVF5 1701 aa18.98■□□□□ 0.63
USP39-206ENST00000448971 CAMTA2O94983 1202 aa18.98■□□□□ 0.63
USP39-206ENST00000448971 CALD1Q05682 793 aaKnown RBP18.98■□□□□ 0.63
USP39-206ENST00000448971 ERFEQ4G0M1 354 aa18.97■□□□□ 0.63
USP39-206ENST00000448971 ZNF219Q9P2Y4 722 aaPredicted RBP18.97■□□□□ 0.63
USP39-206ENST00000448971 BCORQ6W2J9 1755 aa18.96■□□□□ 0.63
USP39-206ENST00000448971 SETDB2Q96T68 719 aa18.96■□□□□ 0.63
USP39-206ENST00000448971 U3KPZ7 1027 aaPredicted RBP18.96■□□□□ 0.63
USP39-206ENST00000448971 LTBP3Q9NS15 1303 aa18.96■□□□□ 0.63
USP39-206ENST00000448971 SLX4Q8IY92 1834 aa18.95■□□□□ 0.62
USP39-206ENST00000448971 ATXN8OSP0DMR3 200 aa18.95■□□□□ 0.62
USP39-206ENST00000448971 SRGNP10124 158 aa18.95■□□□□ 0.62
USP39-206ENST00000448971 DZIP3Q86Y13 1208 aaKnown RBP18.95■□□□□ 0.62
USP39-206ENST00000448971 CFAP44Q96MT7 982 aa18.95■□□□□ 0.62
USP39-206ENST00000448971 COL11A2P13942 1736 aaPredicted RBP18.94■□□□□ 0.62
USP39-206ENST00000448971 CHL1O00533 1208 aa18.94■□□□□ 0.62
USP39-206ENST00000448971 STYK1Q6J9G0 422 aa18.94■□□□□ 0.62
USP39-206ENST00000448971 CNKSR1Q969H4 720 aa18.94■□□□□ 0.62
USP39-206ENST00000448971 HSPA1AP0DMV8 641 aaKnown RBP18.93■□□□□ 0.62
USP39-206ENST00000448971 HSPA1BP0DMV9 641 aaKnown RBP18.93■□□□□ 0.62
USP39-206ENST00000448971 GNAI1P63096 354 aa18.93■□□□□ 0.62
USP39-206ENST00000448971 TNS4Q8IZW8 715 aa18.93■□□□□ 0.62
USP39-206ENST00000448971 CNBD1Q8NA66 436 aa18.93■□□□□ 0.62
USP39-206ENST00000448971 C7orf43Q8WVR3 580 aa18.93■□□□□ 0.62
USP39-206ENST00000448971 TAOK3Q9H2K8 898 aa18.93■□□□□ 0.62
USP39-206ENST00000448971 IFT57Q9NWB7 429 aa18.93■□□□□ 0.62
USP39-206ENST00000448971 NBPF26B4DH59 902 aa18.92■□□□□ 0.62
USP39-206ENST00000448971 DDNO94850 711 aaPredicted RBP18.92■□□□□ 0.62
USP39-206ENST00000448971 POTEIP0CG38 1075 aa18.92■□□□□ 0.62
USP39-206ENST00000448971 POTEJP0CG39 1038 aa18.92■□□□□ 0.62
USP39-206ENST00000448971 EIF2S2P20042 333 aaKnown RBP18.92■□□□□ 0.62
USP39-206ENST00000448971 PRPF40BQ6NWY9 871 aaKnown RBP18.92■□□□□ 0.62
USP39-206ENST00000448971 NBPF10Q6P3W6 841 aaKnown RBP18.92■□□□□ 0.62
USP39-206ENST00000448971 NBPF15Q8N660 670 aa18.92■□□□□ 0.62
USP39-206ENST00000448971 MASTLQ96GX5 879 aa18.92■□□□□ 0.62
USP39-206ENST00000448971 MBIPQ9NS73 344 aa18.92■□□□□ 0.62
USP39-206ENST00000448971 MYL6BP14649 208 aa18.91■□□□□ 0.62
USP39-206ENST00000448971 CCDC27Q2M243 656 aa18.91■□□□□ 0.62
USP39-206ENST00000448971 KRT24Q2M2I5 525 aa18.91■□□□□ 0.62
USP39-206ENST00000448971 CHADLQ6NUI6 762 aa18.91■□□□□ 0.62
USP39-206ENST00000448971 SALL2Q9Y467 1007 aaPredicted RBP18.91■□□□□ 0.62
USP39-206ENST00000448971 ERBB4Q15303 1308 aa18.91■□□□□ 0.62
USP39-206ENST00000448971 CLEC4GQ6UXB4 293 aa18.9■□□□□ 0.62
USP39-206ENST00000448971 NGEFQ8N5V2 710 aa18.9■□□□□ 0.62
USP39-206ENST00000448971 ZNF652Q9Y2D9 606 aa18.9■□□□□ 0.62
USP39-206ENST00000448971 KLRG2A4D1S0 409 aaPredicted RBP18.89■□□□□ 0.61
USP39-206ENST00000448971 CAPN15O75808 1086 aa18.89■□□□□ 0.61
USP39-206ENST00000448971 ST5P78524 1137 aa18.89■□□□□ 0.61
USP39-206ENST00000448971 DIEXFQ68CQ4 756 aaKnown RBP18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms