RNA–Protein interactions for RNA: ENST00000448276.6

SMARCD2-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD2, Length 2,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-203ENST00000448276 GOLGA6L6A8MZA4 724 aa24.41■■□□□ 1.5
SMARCD2-203ENST00000448276 TYRO3Q06418 890 aa24.41■■□□□ 1.5
SMARCD2-203ENST00000448276 CNTROBQ8N137 903 aa24.41■■□□□ 1.5
SMARCD2-203ENST00000448276 ACEP12821 1306 aa24.41■■□□□ 1.5
SMARCD2-203ENST00000448276 AOX1Q06278 1338 aa24.41■■□□□ 1.5
SMARCD2-203ENST00000448276 NRKQ7Z2Y5 1582 aa24.4■■□□□ 1.5
SMARCD2-203ENST00000448276 CDC37L1Q7L3B6 337 aa24.4■■□□□ 1.5
SMARCD2-203ENST00000448276 FAM200AQ8TCP9 573 aa24.4■■□□□ 1.5
SMARCD2-203ENST00000448276 TCEANC2Q96MN5 208 aa24.4■■□□□ 1.5
SMARCD2-203ENST00000448276 TFIP11Q9UBB9 837 aaKnown RBP24.4■■□□□ 1.5
SMARCD2-203ENST00000448276 PEAK1Q9H792 1746 aa24.39■■□□□ 1.5
SMARCD2-203ENST00000448276 NBPF7P0C2Y1 421 aaPredicted RBP24.39■■□□□ 1.5
SMARCD2-203ENST00000448276 ANO6Q4KMQ2 910 aa24.39■■□□□ 1.49
SMARCD2-203ENST00000448276 NUP62CLQ9H1M0 184 aa24.39■■□□□ 1.49
SMARCD2-203ENST00000448276 C3P01024 1663 aa24.39■■□□□ 1.49
SMARCD2-203ENST00000448276 MAP3K11Q16584 847 aa24.38■■□□□ 1.49
SMARCD2-203ENST00000448276 CBX8Q9HC52 389 aa24.38■■□□□ 1.49
SMARCD2-203ENST00000448276 MON2Q7Z3U7 1717 aa24.38■■□□□ 1.49
SMARCD2-203ENST00000448276 HDGFP51858 240 aaKnown RBP24.38■■□□□ 1.49
SMARCD2-203ENST00000448276 TPM3P06753 285 aa24.37■■□□□ 1.49
SMARCD2-203ENST00000448276 LARP1BQ659C4 914 aaKnown RBP24.37■■□□□ 1.49
SMARCD2-203ENST00000448276 EYA1Q99502 592 aa24.37■■□□□ 1.49
SMARCD2-203ENST00000448276 DACT1Q9NYF0 836 aa24.37■■□□□ 1.49
SMARCD2-203ENST00000448276 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.37■■□□□ 1.49
SMARCD2-203ENST00000448276 TPCN1Q9ULQ1 816 aa24.37■■□□□ 1.49
SMARCD2-203ENST00000448276 TRIM5Q9C035 493 aa24.36■■□□□ 1.49
SMARCD2-203ENST00000448276 EPB41L2O43491 1005 aaKnown RBP24.35■■□□□ 1.49
SMARCD2-203ENST00000448276 CYP46A1Q9Y6A2 500 aa24.35■■□□□ 1.49
SMARCD2-203ENST00000448276 RAB11FIP3O75154 756 aa24.35■■□□□ 1.49
SMARCD2-203ENST00000448276 TNNT1P13805 278 aa24.35■■□□□ 1.49
SMARCD2-203ENST00000448276 EIF2S2P20042 333 aaKnown RBP24.35■■□□□ 1.49
SMARCD2-203ENST00000448276 POLA2Q14181 598 aa24.35■■□□□ 1.49
SMARCD2-203ENST00000448276 KIF1BPQ96EK5 621 aa24.35■■□□□ 1.49
SMARCD2-203ENST00000448276 CEBPAP49715 358 aaPredicted RBP24.34■■□□□ 1.49
SMARCD2-203ENST00000448276 VPS53Q5VIR6 699 aa24.34■■□□□ 1.49
SMARCD2-203ENST00000448276 ZNF592Q92610 1267 aa24.34■■□□□ 1.49
SMARCD2-203ENST00000448276 TNMDQ9H2S6 317 aa24.34■■□□□ 1.49
SMARCD2-203ENST00000448276 ARHGEF10O15013 1369 aa24.34■■□□□ 1.49
SMARCD2-203ENST00000448276 TNRQ92752 1358 aa24.34■■□□□ 1.49
SMARCD2-203ENST00000448276 OS9Q13438 667 aaPredicted RBP24.34■■□□□ 1.49
SMARCD2-203ENST00000448276 XRN1Q8IZH2 1706 aaKnown RBP24.34■■□□□ 1.49
SMARCD2-203ENST00000448276 KIF20AO95235 890 aa24.34■■□□□ 1.49
SMARCD2-203ENST00000448276 KRT85P78386 507 aa24.33■■□□□ 1.49
SMARCD2-203ENST00000448276 ZSCAN25Q6NSZ9 544 aa24.33■■□□□ 1.49
SMARCD2-203ENST00000448276 ZSWIM6Q9HCJ5 1215 aa24.33■■□□□ 1.49
SMARCD2-203ENST00000448276 HDGFL1Q5TGJ6 251 aa24.33■■□□□ 1.48
SMARCD2-203ENST00000448276 IL17REQ8NFR9 667 aa24.32■■□□□ 1.48
SMARCD2-203ENST00000448276 SETD1AO15047 1707 aaKnown RBP24.32■■□□□ 1.48
SMARCD2-203ENST00000448276 ANXA1P04083 346 aa24.32■■□□□ 1.48
SMARCD2-203ENST00000448276 CCDC144BQ3MJ40 725 aa24.32■■□□□ 1.48
SMARCD2-203ENST00000448276 CCDC144CPQ8IYA2 1237 aa24.32■■□□□ 1.48
SMARCD2-203ENST00000448276 OVOS2A0A0J9YW53 1432 aa24.31■■□□□ 1.48
SMARCD2-203ENST00000448276 OVOS2Q6IE36 1432 aa24.31■■□□□ 1.48
SMARCD2-203ENST00000448276 ZNF75DP51815 510 aa24.31■■□□□ 1.48
SMARCD2-203ENST00000448276 ARID5BQ14865 1188 aa24.31■■□□□ 1.48
SMARCD2-203ENST00000448276 ZNF771Q7L3S4 317 aaPredicted RBP24.31■■□□□ 1.48
SMARCD2-203ENST00000448276 CACTINQ8WUQ7 758 aaKnown RBP24.31■■□□□ 1.48
SMARCD2-203ENST00000448276 DNAJC25Q9H1X3 360 aa24.31■■□□□ 1.48
SMARCD2-203ENST00000448276 KIF13AQ9H1H9 1805 aa24.31■■□□□ 1.48
SMARCD2-203ENST00000448276 STK3Q13188 491 aa24.31■■□□□ 1.48
SMARCD2-203ENST00000448276 CTNNA3Q9UI47 895 aa24.31■■□□□ 1.48
SMARCD2-203ENST00000448276 TAF6LQ9Y6J9 622 aa24.31■■□□□ 1.48
SMARCD2-203ENST00000448276 NOL12Q9UGY1 213 aaKnown RBP eCLIP24.3■■□□□ 1.48
SMARCD2-203ENST00000448276 V9GYY5 206 aaPredicted RBP24.3■■□□□ 1.48
SMARCD2-203ENST00000448276 CEP170BQ9Y4F5 1589 aaPredicted RBP24.3■■□□□ 1.48
SMARCD2-203ENST00000448276 KCNJ4P48050 445 aa24.3■■□□□ 1.48
SMARCD2-203ENST00000448276 AMPHP49418 695 aa24.3■■□□□ 1.48
SMARCD2-203ENST00000448276 TPD52L1Q16890 204 aaPredicted RBP24.3■■□□□ 1.48
SMARCD2-203ENST00000448276 ZSCAN31Q96LW9 406 aaPredicted RBP24.3■■□□□ 1.48
SMARCD2-203ENST00000448276 SH2B1Q9NRF2 756 aaPredicted RBP24.3■■□□□ 1.48
SMARCD2-203ENST00000448276 NRXN3Q9Y4C0 1643 aa24.3■■□□□ 1.48
SMARCD2-203ENST00000448276 GOLGA6L4A6NEF3 574 aa24.29■■□□□ 1.48
SMARCD2-203ENST00000448276 GNAT3A8MTJ3 354 aa24.29■■□□□ 1.48
SMARCD2-203ENST00000448276 NR1I2O75469 434 aa24.29■■□□□ 1.48
SMARCD2-203ENST00000448276 TAF7Q15545 349 aaPredicted RBP24.29■■□□□ 1.48
SMARCD2-203ENST00000448276 FAM227BQ96M60 508 aa24.29■■□□□ 1.48
SMARCD2-203ENST00000448276 OGFRQ9NZT2 677 aa24.29■■□□□ 1.48
SMARCD2-203ENST00000448276 SMTNL1A8MU46 457 aa24.29■■□□□ 1.48
SMARCD2-203ENST00000448276 PA2G4Q9UQ80 394 aaKnown RBP24.29■■□□□ 1.48
SMARCD2-203ENST00000448276 AKAP12Q02952 1782 aa24.29■■□□□ 1.48
SMARCD2-203ENST00000448276 RGPD1P0DJD0 1748 aa24.28■■□□□ 1.48
SMARCD2-203ENST00000448276 ITSN1Q15811 1721 aa24.28■■□□□ 1.48
SMARCD2-203ENST00000448276 LARP1Q6PKG0 1096 aaKnown RBP24.28■■□□□ 1.48
SMARCD2-203ENST00000448276 LTV1Q96GA3 475 aaPredicted RBP24.28■■□□□ 1.48
SMARCD2-203ENST00000448276 SPATA32Q96LK8 384 aa24.28■■□□□ 1.48
SMARCD2-203ENST00000448276 RBM8AQ9Y5S9 174 aaKnown RBP24.28■■□□□ 1.48
SMARCD2-203ENST00000448276 TMEM2Q9UHN6 1383 aa24.28■■□□□ 1.48
SMARCD2-203ENST00000448276 PLA2G4DQ86XP0 818 aa24.28■■□□□ 1.48
SMARCD2-203ENST00000448276 SLC26A8Q96RN1 970 aa24.28■■□□□ 1.48
SMARCD2-203ENST00000448276 CLIP2Q9UDT6 1046 aa24.28■■□□□ 1.48
SMARCD2-203ENST00000448276 USP27XA6NNY8 438 aa24.27■■□□□ 1.48
SMARCD2-203ENST00000448276 LTKP29376 864 aa24.27■■□□□ 1.48
SMARCD2-203ENST00000448276 NECTIN1Q15223 517 aa24.27■■□□□ 1.48
SMARCD2-203ENST00000448276 CREB3L3Q68CJ9 461 aa24.27■■□□□ 1.48
SMARCD2-203ENST00000448276 A0A087WWV3 80 aa24.26■■□□□ 1.47
SMARCD2-203ENST00000448276 GLRX3O76003 335 aaKnown RBP24.26■■□□□ 1.47
SMARCD2-203ENST00000448276 CCDC112Q8NEF3 446 aa24.26■■□□□ 1.47
SMARCD2-203ENST00000448276 FEZ1Q99689 392 aa24.26■■□□□ 1.47
SMARCD2-203ENST00000448276 ROBO2Q9HCK4 1378 aa24.26■■□□□ 1.47
SMARCD2-203ENST00000448276 ZNF165P49910 485 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms