RNA–Protein interactions for RNA: ENST00000447601.6

FAM3A-215, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3A, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-215ENST00000447601 PIP4K2AP48426 406 aaPredicted RBP23.89■■□□□ 1.42
FAM3A-215ENST00000447601 CLASRPQ8N2M8 674 aaKnown RBP23.89■■□□□ 1.42
FAM3A-215ENST00000447601 ROBO1Q9Y6N7 1651 aa23.89■■□□□ 1.41
FAM3A-215ENST00000447601 USP42Q9H9J4 1324 aaKnown RBP23.89■■□□□ 1.41
FAM3A-215ENST00000447601 PAPPAQ13219 1627 aa23.88■■□□□ 1.41
FAM3A-215ENST00000447601 SHANK3Q9BYB0 1731 aa23.88■■□□□ 1.41
FAM3A-215ENST00000447601 ESYT1Q9BSJ8 1104 aa23.88■■□□□ 1.41
FAM3A-215ENST00000447601 COL14A1Q05707 1796 aaKnown RBP23.88■■□□□ 1.41
FAM3A-215ENST00000447601 CHMLP26374 656 aa23.87■■□□□ 1.41
FAM3A-215ENST00000447601 TTC41PQ6P2S7 1318 aa23.87■■□□□ 1.41
FAM3A-215ENST00000447601 UBR2Q8IWV8 1755 aa23.87■■□□□ 1.41
FAM3A-215ENST00000447601 SPRYD3Q8NCJ5 442 aa23.87■■□□□ 1.41
FAM3A-215ENST00000447601 PI4K2BQ8TCG2 481 aa23.87■■□□□ 1.41
FAM3A-215ENST00000447601 TMOD3Q9NYL9 352 aa23.87■■□□□ 1.41
FAM3A-215ENST00000447601 CHMP5Q9NZZ3 219 aa23.87■■□□□ 1.41
FAM3A-215ENST00000447601 COL15A1P39059 1388 aa23.86■■□□□ 1.41
FAM3A-215ENST00000447601 NBPF26B4DH59 902 aa23.86■■□□□ 1.41
FAM3A-215ENST00000447601 NBPF14Q5TI25 921 aa23.86■■□□□ 1.41
FAM3A-215ENST00000447601 NBPF10Q6P3W6 841 aaKnown RBP23.86■■□□□ 1.41
FAM3A-215ENST00000447601 NBPF15Q8N660 670 aa23.86■■□□□ 1.41
FAM3A-215ENST00000447601 PA2G4Q9UQ80 394 aaKnown RBP23.86■■□□□ 1.41
FAM3A-215ENST00000447601 COL22A1Q8NFW1 1626 aaPredicted RBP23.86■■□□□ 1.41
FAM3A-215ENST00000447601 K7ELQ4 463 aaPredicted RBP23.85■■□□□ 1.41
FAM3A-215ENST00000447601 PTCD1O75127 700 aaKnown RBP23.85■■□□□ 1.41
FAM3A-215ENST00000447601 FRAT2O75474 233 aaPredicted RBP23.85■■□□□ 1.41
FAM3A-215ENST00000447601 DISP2A7MBM2 1401 aa23.85■■□□□ 1.41
FAM3A-215ENST00000447601 G3BP1Q13283 466 aaKnown RBP eCLIP23.84■■□□□ 1.41
FAM3A-215ENST00000447601 GPATCH3Q96I76 525 aa23.84■■□□□ 1.41
FAM3A-215ENST00000447601 RBM42Q9BTD8 480 aaKnown RBP23.84■■□□□ 1.41
FAM3A-215ENST00000447601 TUBGCP6Q96RT7 1819 aa23.84■■□□□ 1.41
FAM3A-215ENST00000447601 UNC5CLQ8IV45 518 aa23.84■■□□□ 1.41
FAM3A-215ENST00000447601 GLRX3O76003 335 aaKnown RBP23.83■■□□□ 1.41
FAM3A-215ENST00000447601 CNTROBQ8N137 903 aa23.83■■□□□ 1.41
FAM3A-215ENST00000447601 IFIT2P09913 472 aaKnown RBP23.82■■□□□ 1.4
FAM3A-215ENST00000447601 DEKP35659 375 aaKnown RBP23.82■■□□□ 1.4
FAM3A-215ENST00000447601 LTBP4Q8N2S1 1624 aa23.81■■□□□ 1.4
FAM3A-215ENST00000447601 EPB41L2O43491 1005 aaKnown RBP23.81■■□□□ 1.4
FAM3A-215ENST00000447601 CD2BP2O95400 341 aaKnown RBP23.81■■□□□ 1.4
FAM3A-215ENST00000447601 A1BGP04217 495 aa23.81■■□□□ 1.4
FAM3A-215ENST00000447601 MCCP23508 829 aa23.81■■□□□ 1.4
FAM3A-215ENST00000447601 ECHDC1Q9NTX5 307 aa23.81■■□□□ 1.4
FAM3A-215ENST00000447601 A0A087WZG4 1122 aa23.8■■□□□ 1.4
FAM3A-215ENST00000447601 ATP5J2-PTCD1G3V325 749 aa23.8■■□□□ 1.4
FAM3A-215ENST00000447601 UBE3BQ7Z3V4 1068 aa23.8■■□□□ 1.4
FAM3A-215ENST00000447601 VSIG10Q8N0Z9 540 aa23.8■■□□□ 1.4
FAM3A-215ENST00000447601 TEX13AQ9BXU3 409 aaPredicted RBP23.8■■□□□ 1.4
FAM3A-215ENST00000447601 ARFGEF2Q9Y6D5 1785 aa23.8■■□□□ 1.4
FAM3A-215ENST00000447601 DDIT3P35638 169 aa23.8■■□□□ 1.4
FAM3A-215ENST00000447601 RABL6Q3YEC7 729 aaPredicted RBP23.8■■□□□ 1.4
FAM3A-215ENST00000447601 EPHA10Q5JZY3 1008 aa23.8■■□□□ 1.4
FAM3A-215ENST00000447601 CIZ1Q9ULV3 898 aaPredicted RBP23.8■■□□□ 1.4
FAM3A-215ENST00000447601 TOGARAM1Q9Y4F4 1720 aa23.79■■□□□ 1.4
FAM3A-215ENST00000447601 HSP90AA1P07900 732 aaKnown RBP23.79■■□□□ 1.4
FAM3A-215ENST00000447601 AACSQ86V21 672 aa23.79■■□□□ 1.4
FAM3A-215ENST00000447601 COL16A1Q07092 1604 aaPredicted RBP23.78■■□□□ 1.4
FAM3A-215ENST00000447601 ST18O60284 1047 aa23.78■■□□□ 1.4
FAM3A-215ENST00000447601 SASH1O94885 1247 aa23.78■■□□□ 1.4
FAM3A-215ENST00000447601 PIGBQ92521 554 aa23.78■■□□□ 1.4
FAM3A-215ENST00000447601 ANO2Q9NQ90 1003 aa23.78■■□□□ 1.4
FAM3A-215ENST00000447601 TTLL7Q6ZT98 887 aa23.77■■□□□ 1.4
FAM3A-215ENST00000447601 COPRSQ9NQ92 184 aa23.77■■□□□ 1.4
FAM3A-215ENST00000447601 CASP7P55210 303 aa23.77■■□□□ 1.4
FAM3A-215ENST00000447601 PLCH1Q4KWH8 1693 aa23.77■■□□□ 1.4
FAM3A-215ENST00000447601 MAP4K4O95819 1239 aaPredicted RBP23.76■■□□□ 1.39
FAM3A-215ENST00000447601 CWC25Q9NXE8 425 aaPredicted RBP23.76■■□□□ 1.39
FAM3A-215ENST00000447601 EXOC5O00471 708 aa23.75■■□□□ 1.39
FAM3A-215ENST00000447601 ANAPC15P60006 121 aa23.75■■□□□ 1.39
FAM3A-215ENST00000447601 SIL1Q9H173 461 aa23.75■■□□□ 1.39
FAM3A-215ENST00000447601 H7C1W4 665 aa23.75■■□□□ 1.39
FAM3A-215ENST00000447601 ASAP1Q9ULH1 1129 aa23.75■■□□□ 1.39
FAM3A-215ENST00000447601 LRP6O75581 1613 aa23.74■■□□□ 1.39
FAM3A-215ENST00000447601 RFX5P48382 616 aaPredicted RBP23.74■■□□□ 1.39
FAM3A-215ENST00000447601 CCDC191Q8NCU4 936 aa23.74■■□□□ 1.39
FAM3A-215ENST00000447601 CDCA7Q9BWT1 371 aaPredicted RBP23.74■■□□□ 1.39
FAM3A-215ENST00000447601 ATG3Q9NT62 314 aa23.74■■□□□ 1.39
FAM3A-215ENST00000447601 STARD3NLO95772 234 aa23.73■■□□□ 1.39
FAM3A-215ENST00000447601 JARID2Q92833 1246 aaPredicted RBP23.73■■□□□ 1.39
FAM3A-215ENST00000447601 EAF2Q96CJ1 260 aaPredicted RBP23.73■■□□□ 1.39
FAM3A-215ENST00000447601 ZBTB3Q9H5J0 574 aa23.73■■□□□ 1.39
FAM3A-215ENST00000447601 KLHDC4Q8TBB5 520 aa23.73■■□□□ 1.39
FAM3A-215ENST00000447601 BCL9O00512 1426 aa23.72■■□□□ 1.39
FAM3A-215ENST00000447601 SGSM2O43147 1006 aa23.72■■□□□ 1.39
FAM3A-215ENST00000447601 PTPN12Q05209 780 aaKnown RBP23.72■■□□□ 1.39
FAM3A-215ENST00000447601 IL17RAQ96F46 866 aa23.72■■□□□ 1.39
FAM3A-215ENST00000447601 AFDNP55196 1824 aaKnown RBP23.72■■□□□ 1.39
FAM3A-215ENST00000447601 DNAJC10Q8IXB1 793 aa23.71■■□□□ 1.39
FAM3A-215ENST00000447601 EVI5LQ96CN4 794 aa23.71■■□□□ 1.39
FAM3A-215ENST00000447601 NUP188Q5SRE5 1749 aa23.71■■□□□ 1.39
FAM3A-215ENST00000447601 IL27Q8NEV9 243 aa23.7■■□□□ 1.39
FAM3A-215ENST00000447601 RUFY2Q8WXA3 655 aa23.7■■□□□ 1.39
FAM3A-215ENST00000447601 THRAP3Q9Y2W1 955 aaKnown RBP23.7■■□□□ 1.39
FAM3A-215ENST00000447601 DIAPH3Q9NSV4 1193 aa23.7■■□□□ 1.38
FAM3A-215ENST00000447601 FOXO4P98177 505 aa23.69■■□□□ 1.38
FAM3A-215ENST00000447601 LMBR1LQ6UX01 489 aa23.69■■□□□ 1.38
FAM3A-215ENST00000447601 CCDC8Q9H0W5 538 aaPredicted RBP23.69■■□□□ 1.38
FAM3A-215ENST00000447601 KIF6Q6ZMV9 814 aa23.68■■□□□ 1.38
FAM3A-215ENST00000447601 IL25Q9H293 177 aa23.68■■□□□ 1.38
FAM3A-215ENST00000447601 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.68■■□□□ 1.38
FAM3A-215ENST00000447601 RAD50Q92878 1312 aa23.68■■□□□ 1.38
FAM3A-215ENST00000447601 ADAMTS2O95450 1211 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms