RNA–Protein interactions for RNA: ENST00000446783.1

CHCHD3P3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3 pseudogene 3, humanhuman

BASIC

Gene CHCHD3P3, Length 640 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3P3-201ENST00000446783 NBPF15Q8N660 670 aa15.19■□□□□ 0.02
CHCHD3P3-201ENST00000446783 ZNF652Q9Y2D9 606 aa15.19■□□□□ 0.02
CHCHD3P3-201ENST00000446783 SBF1O95248 1867 aa15.18■□□□□ 0.02
CHCHD3P3-201ENST00000446783 SRGNP10124 158 aa15.18■□□□□ 0.02
CHCHD3P3-201ENST00000446783 SMC1BQ8NDV3 1235 aa15.18■□□□□ 0.02
CHCHD3P3-201ENST00000446783 MASTLQ96GX5 879 aa15.18■□□□□ 0.02
CHCHD3P3-201ENST00000446783 FAM177BA6PVY3 158 aa15.17■□□□□ 0.02
CHCHD3P3-201ENST00000446783 ERFEQ4G0M1 354 aa15.17■□□□□ 0.02
CHCHD3P3-201ENST00000446783 DPY19L2Q6NUT2 758 aa15.17■□□□□ 0.02
CHCHD3P3-201ENST00000446783 TPTE2Q6XPS3 522 aa15.17■□□□□ 0.02
CHCHD3P3-201ENST00000446783 NIP7Q9Y221 180 aaKnown RBP eCLIP15.17■□□□□ 0.02
CHCHD3P3-201ENST00000446783 PRPF40BQ6NWY9 871 aaKnown RBP15.16■□□□□ 0.02
CHCHD3P3-201ENST00000446783 NGEFQ8N5V2 710 aa15.16■□□□□ 0.02
CHCHD3P3-201ENST00000446783 PNISRQ8TF01 805 aaKnown RBP15.16■□□□□ 0.02
CHCHD3P3-201ENST00000446783 TAOK3Q9H2K8 898 aa15.16■□□□□ 0.02
CHCHD3P3-201ENST00000446783 HLFQ16534 295 aa15.15■□□□□ 0.02
CHCHD3P3-201ENST00000446783 PLEKHF1Q96S99 279 aa15.15■□□□□ 0.02
CHCHD3P3-201ENST00000446783 SCN7AQ01118 1682 aa15.15■□□□□ 0.02
CHCHD3P3-201ENST00000446783 DLEC1Q9Y238 1755 aa15.14■□□□□ 0.01
CHCHD3P3-201ENST00000446783 POTECB2RU33 542 aa15.14■□□□□ 0.01
CHCHD3P3-201ENST00000446783 NPR1P16066 1061 aa15.14■□□□□ 0.01
CHCHD3P3-201ENST00000446783 NFE2L2Q16236 605 aa15.14■□□□□ 0.01
CHCHD3P3-201ENST00000446783 SOGA3Q5TF21 947 aa15.14■□□□□ 0.01
CHCHD3P3-201ENST00000446783 KLRG1Q96E93 195 aa15.14■□□□□ 0.01
CHCHD3P3-201ENST00000446783 THUMPD2Q9BTF0 503 aaKnown RBP15.14■□□□□ 0.01
CHCHD3P3-201ENST00000446783 PNNQ9H307 717 aaKnown RBP15.14■□□□□ 0.01
CHCHD3P3-201ENST00000446783 RRP7AQ9Y3A4 280 aaKnown RBP15.14■□□□□ 0.01
CHCHD3P3-201ENST00000446783 ANKRD31Q8N7Z5 1873 aa15.14■□□□□ 0.01
CHCHD3P3-201ENST00000446783 LTBP3Q9NS15 1303 aa15.14■□□□□ 0.01
CHCHD3P3-201ENST00000446783 RGL2O15211 777 aa15.13■□□□□ 0.01
CHCHD3P3-201ENST00000446783 GTF2E1P29083 439 aaPredicted RBP15.13■□□□□ 0.01
CHCHD3P3-201ENST00000446783 EIF4A1P60842 406 aaKnown RBP15.13■□□□□ 0.01
CHCHD3P3-201ENST00000446783 KLRG2A4D1S0 409 aaPredicted RBP15.12■□□□□ 0.01
CHCHD3P3-201ENST00000446783 C7orf43Q8WVR3 580 aa15.12■□□□□ 0.01
CHCHD3P3-201ENST00000446783 MAPK8IP3Q9UPT6 1336 aa15.12■□□□□ 0.01
CHCHD3P3-201ENST00000446783 DDNO94850 711 aaPredicted RBP15.11■□□□□ 0.01
CHCHD3P3-201ENST00000446783 CCDC93Q567U6 631 aa15.11■□□□□ 0.01
CHCHD3P3-201ENST00000446783 TNRC6CQ9HCJ0 1690 aaKnown RBP15.1■□□□□ 0.01
CHCHD3P3-201ENST00000446783 ERVV-1B6SEH8 477 aa15.1■□□□□ 0.01
CHCHD3P3-201ENST00000446783 MYL6BP14649 208 aa15.1■□□□□ 0.01
CHCHD3P3-201ENST00000446783 TTLL7Q6ZT98 887 aa15.1■□□□□ 0.01
CHCHD3P3-201ENST00000446783 SLX4Q8IY92 1834 aa15.1■□□□□ 0.01
CHCHD3P3-201ENST00000446783 COL11A2P13942 1736 aaPredicted RBP15.09■□□□□ 0.01
CHCHD3P3-201ENST00000446783 OLFM4Q6UX06 510 aa15.09■□□□□ 0.01
CHCHD3P3-201ENST00000446783 KIF6Q6ZMV9 814 aa15.09■□□□□ 0.01
CHCHD3P3-201ENST00000446783 JMYQ8N9B5 988 aa15.09■□□□□ 0.01
CHCHD3P3-201ENST00000446783 MAP3K15Q6ZN16 1313 aa15.09■□□□□ 0.01
CHCHD3P3-201ENST00000446783 BCORQ6W2J9 1755 aa15.08■□□□□ 0.01
CHCHD3P3-201ENST00000446783 CCDC88AQ3V6T2 1871 aa15.08■□□□□ 0.01
CHCHD3P3-201ENST00000446783 GPTP24298 496 aa15.08■□□□□ 0
CHCHD3P3-201ENST00000446783 ALDH1B1P30837 517 aa15.08■□□□□ 0
CHCHD3P3-201ENST00000446783 RIPK4P57078 832 aa15.08■□□□□ 0
CHCHD3P3-201ENST00000446783 FKBP4Q02790 459 aaKnown RBP eCLIP15.08■□□□□ 0
CHCHD3P3-201ENST00000446783 NUTM1Q86Y26 1132 aa15.08■□□□□ 0
CHCHD3P3-201ENST00000446783 NYXQ9GZU5 481 aa15.08■□□□□ 0
CHCHD3P3-201ENST00000446783 ZBTB3Q9H5J0 574 aa15.08■□□□□ 0
CHCHD3P3-201ENST00000446783 ZNF277Q9NRM2 450 aaPredicted RBP15.08■□□□□ 0
CHCHD3P3-201ENST00000446783 TSPYL4Q9UJ04 414 aa15.08■□□□□ 0
CHCHD3P3-201ENST00000446783 WDR90Q96KV7 1748 aa15.08■□□□□ 0
CHCHD3P3-201ENST00000446783 RALBP1Q15311 655 aa15.07■□□□□ 0
CHCHD3P3-201ENST00000446783 RTKN2Q8IZC4 609 aa15.07■□□□□ 0
CHCHD3P3-201ENST00000446783 FER1L6Q2WGJ9 1857 aa15.06■□□□□ 0
CHCHD3P3-201ENST00000446783 CHADLQ6NUI6 762 aa15.06■□□□□ 0
CHCHD3P3-201ENST00000446783 SYNE4Q8N205 404 aa15.06■□□□□ 0
CHCHD3P3-201ENST00000446783 POTEIP0CG38 1075 aa15.05■□□□□ -0
CHCHD3P3-201ENST00000446783 POTEJP0CG39 1038 aa15.05■□□□□ -0
CHCHD3P3-201ENST00000446783 EIF2S2P20042 333 aaKnown RBP15.05■□□□□ -0
CHCHD3P3-201ENST00000446783 SUSD4Q5VX71 490 aa15.05■□□□□ -0
CHCHD3P3-201ENST00000446783 TIAM2Q8IVF5 1701 aa15.05■□□□□ -0
CHCHD3P3-201ENST00000446783 ABCC12Q96J65 1359 aa15.04■□□□□ -0
CHCHD3P3-201ENST00000446783 IQCA1LA6NCM1 817 aa15.04■□□□□ -0
CHCHD3P3-201ENST00000446783 TMPOP42166 694 aaKnown RBP15.04■□□□□ -0
CHCHD3P3-201ENST00000446783 DDX10Q13206 875 aaKnown RBP15.04■□□□□ -0
CHCHD3P3-201ENST00000446783 CRY2Q49AN0 593 aa15.04■□□□□ -0
CHCHD3P3-201ENST00000446783 GIGYF2Q6Y7W6 1299 aaKnown RBP15.04■□□□□ -0
CHCHD3P3-201ENST00000446783 ZNF34Q8IZ26 560 aa15.04■□□□□ -0
CHCHD3P3-201ENST00000446783 RPGRQ92834 1020 aaKnown RBP15.04■□□□□ -0
CHCHD3P3-201ENST00000446783 ERBB4Q15303 1308 aa15.03■□□□□ -0
CHCHD3P3-201ENST00000446783 UBN2Q6ZU65 1347 aa15.03■□□□□ -0
CHCHD3P3-201ENST00000446783 IARSP41252 1262 aaKnown RBP15.03■□□□□ -0
CHCHD3P3-201ENST00000446783 L3MBTL3Q96JM7 780 aaPredicted RBP15.03■□□□□ -0
CHCHD3P3-201ENST00000446783 TAF1DQ9H5J8 278 aaPredicted RBP15.03■□□□□ -0
CHCHD3P3-201ENST00000446783 DICER1Q9UPY3 1922 aaKnown RBP15.02■□□□□ -0
CHCHD3P3-201ENST00000446783 ZNF541Q9H0D2 1346 aa15.02■□□□□ -0
CHCHD3P3-201ENST00000446783 ANXA1P04083 346 aa15.02■□□□□ -0
CHCHD3P3-201ENST00000446783 LMOD3Q0VAK6 560 aa15.02■□□□□ -0
CHCHD3P3-201ENST00000446783 PDIA6Q15084 440 aa15.02■□□□□ -0
CHCHD3P3-201ENST00000446783 NEUROD2Q15784 382 aa15.02■□□□□ -0
CHCHD3P3-201ENST00000446783 CC2D2BQ6DHV5 1058 aa15.02■□□□□ -0
CHCHD3P3-201ENST00000446783 DLG5Q8TDM6 1919 aa15.02□□□□□ -0.01
CHCHD3P3-201ENST00000446783 TCERG1O14776 1098 aaKnown RBP15.01□□□□□ -0.01
CHCHD3P3-201ENST00000446783 NTSR2O95665 410 aa15.01□□□□□ -0.01
CHCHD3P3-201ENST00000446783 HOXA10P31260 410 aaPredicted RBP15.01□□□□□ -0.01
CHCHD3P3-201ENST00000446783 PROSER3Q2NL68 480 aa15.01□□□□□ -0.01
CHCHD3P3-201ENST00000446783 EAPPQ56P03 285 aaPredicted RBP15.01□□□□□ -0.01
CHCHD3P3-201ENST00000446783 PPP1R42Q7Z4L9 355 aa15.01□□□□□ -0.01
CHCHD3P3-201ENST00000446783 LDHDQ86WU2 507 aa15.01□□□□□ -0.01
CHCHD3P3-201ENST00000446783 CCDC146Q8IYE0 955 aa15.01□□□□□ -0.01
CHCHD3P3-201ENST00000446783 NECTIN2Q92692 538 aa15.01□□□□□ -0.01
CHCHD3P3-201ENST00000446783 RBM17Q96I25 401 aaKnown RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms