RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 MTX1Q13505 466 aa11.68□□□□□ -0.54
COL6A4P1-201ENST00000446690 NFKBIBQ15653 356 aa11.68□□□□□ -0.54
COL6A4P1-201ENST00000446690 RBM42Q9BTD8 480 aaKnown RBP11.68□□□□□ -0.54
COL6A4P1-201ENST00000446690 STAP2Q9UGK3 403 aa11.68□□□□□ -0.54
COL6A4P1-201ENST00000446690 PLBD2Q8NHP8 589 aa11.68□□□□□ -0.54
COL6A4P1-201ENST00000446690 SYTL4Q96C24 671 aaPredicted RBP11.68□□□□□ -0.54
COL6A4P1-201ENST00000446690 KIF2CQ99661 725 aa11.68□□□□□ -0.54
COL6A4P1-201ENST00000446690 USP26Q9BXU7 913 aa11.68□□□□□ -0.54
COL6A4P1-201ENST00000446690 SIL1Q9H173 461 aa11.68□□□□□ -0.54
COL6A4P1-201ENST00000446690 ASAP1Q9ULH1 1129 aa11.68□□□□□ -0.54
COL6A4P1-201ENST00000446690 UTYO14607 1347 aa11.67□□□□□ -0.54
COL6A4P1-201ENST00000446690 EXOC5O00471 708 aa11.67□□□□□ -0.54
COL6A4P1-201ENST00000446690 ERC2O15083 957 aa11.67□□□□□ -0.54
COL6A4P1-201ENST00000446690 G3BP1Q13283 466 aaKnown RBP eCLIP11.67□□□□□ -0.54
COL6A4P1-201ENST00000446690 TTLL7Q6ZT98 887 aa11.67□□□□□ -0.54
COL6A4P1-201ENST00000446690 UBE3BQ7Z3V4 1068 aa11.67□□□□□ -0.54
COL6A4P1-201ENST00000446690 UNC5CLQ8IV45 518 aa11.67□□□□□ -0.54
COL6A4P1-201ENST00000446690 CLASRPQ8N2M8 674 aaKnown RBP11.67□□□□□ -0.54
COL6A4P1-201ENST00000446690 PIGBQ92521 554 aa11.67□□□□□ -0.54
COL6A4P1-201ENST00000446690 ARXQ96QS3 562 aa11.67□□□□□ -0.54
COL6A4P1-201ENST00000446690 N4BP2Q86UW6 1770 aaPredicted RBP11.67□□□□□ -0.54
COL6A4P1-201ENST00000446690 ROBO1Q9Y6N7 1651 aa11.67□□□□□ -0.54
COL6A4P1-201ENST00000446690 A0A087WZG4 1122 aa11.66□□□□□ -0.54
COL6A4P1-201ENST00000446690 A0A0G2JS52 829 aa11.66□□□□□ -0.54
COL6A4P1-201ENST00000446690 REC8O95072 547 aa11.66□□□□□ -0.54
COL6A4P1-201ENST00000446690 KLHDC4Q8TBB5 520 aa11.66□□□□□ -0.54
COL6A4P1-201ENST00000446690 ZBTB3Q9H5J0 574 aa11.66□□□□□ -0.54
COL6A4P1-201ENST00000446690 EPHA10Q5JZY3 1008 aa11.66□□□□□ -0.54
COL6A4P1-201ENST00000446690 IFIT2P09913 472 aaKnown RBP11.65□□□□□ -0.54
COL6A4P1-201ENST00000446690 ERC1Q8IUD2 1116 aa11.65□□□□□ -0.54
COL6A4P1-201ENST00000446690 FRAT2O75474 233 aaPredicted RBP11.64□□□□□ -0.55
COL6A4P1-201ENST00000446690 CHMLP26374 656 aa11.64□□□□□ -0.55
COL6A4P1-201ENST00000446690 AACSQ86V21 672 aa11.64□□□□□ -0.55
COL6A4P1-201ENST00000446690 PI4K2BQ8TCG2 481 aa11.64□□□□□ -0.55
COL6A4P1-201ENST00000446690 SNX21Q969T3 373 aa11.64□□□□□ -0.55
COL6A4P1-201ENST00000446690 ANTXR1Q9H6X2 564 aa11.64□□□□□ -0.55
COL6A4P1-201ENST00000446690 ATG3Q9NT62 314 aa11.64□□□□□ -0.55
COL6A4P1-201ENST00000446690 CHMP3Q9Y3E7 222 aa11.64□□□□□ -0.55
COL6A4P1-201ENST00000446690 CCDC9Q9Y3X0 531 aaKnown RBP11.64□□□□□ -0.55
COL6A4P1-201ENST00000446690 ERBB4Q15303 1308 aa11.64□□□□□ -0.55
COL6A4P1-201ENST00000446690 CD2BP2O95400 341 aaKnown RBP11.64□□□□□ -0.55
COL6A4P1-201ENST00000446690 HSP90AA1P07900 732 aaKnown RBP11.64□□□□□ -0.55
COL6A4P1-201ENST00000446690 DNAJC10Q8IXB1 793 aa11.64□□□□□ -0.55
COL6A4P1-201ENST00000446690 ESYT1Q9BSJ8 1104 aa11.64□□□□□ -0.55
COL6A4P1-201ENST00000446690 FOXD4L1Q9NU39 408 aa11.64□□□□□ -0.55
COL6A4P1-201ENST00000446690 AOX1Q06278 1338 aa11.64□□□□□ -0.55
COL6A4P1-201ENST00000446690 SASH1O94885 1247 aa11.63□□□□□ -0.55
COL6A4P1-201ENST00000446690 ANO2Q9NQ90 1003 aa11.63□□□□□ -0.55
COL6A4P1-201ENST00000446690 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.63□□□□□ -0.55
COL6A4P1-201ENST00000446690 TOM1O60784 492 aa11.63□□□□□ -0.55
COL6A4P1-201ENST00000446690 CNTROBQ8N137 903 aa11.63□□□□□ -0.55
COL6A4P1-201ENST00000446690 CCDC8Q9H0W5 538 aaPredicted RBP11.63□□□□□ -0.55
COL6A4P1-201ENST00000446690 KCPQ6ZWJ8 1503 aa11.62□□□□□ -0.55
COL6A4P1-201ENST00000446690 GPATCH3Q96I76 525 aa11.62□□□□□ -0.55
COL6A4P1-201ENST00000446690 CWC25Q9NXE8 425 aaPredicted RBP11.62□□□□□ -0.55
COL6A4P1-201ENST00000446690 GLRX3O76003 335 aaKnown RBP11.61□□□□□ -0.55
COL6A4P1-201ENST00000446690 STARD3NLO95772 234 aa11.61□□□□□ -0.55
COL6A4P1-201ENST00000446690 PRIM1P49642 420 aaKnown RBP11.61□□□□□ -0.55
COL6A4P1-201ENST00000446690 RABEP1Q15276 862 aa11.61□□□□□ -0.55
COL6A4P1-201ENST00000446690 IL27Q8NEV9 243 aa11.61□□□□□ -0.55
COL6A4P1-201ENST00000446690 TEX13AQ9BXU3 409 aaPredicted RBP11.61□□□□□ -0.55
COL6A4P1-201ENST00000446690 ECHDC1Q9NTX5 307 aa11.61□□□□□ -0.55
COL6A4P1-201ENST00000446690 LTBP4Q8N2S1 1624 aa11.61□□□□□ -0.55
COL6A4P1-201ENST00000446690 LMBR1LQ6UX01 489 aa11.61□□□□□ -0.55
COL6A4P1-201ENST00000446690 EAF2Q96CJ1 260 aaPredicted RBP11.61□□□□□ -0.55
COL6A4P1-201ENST00000446690 TTC41PQ6P2S7 1318 aa11.61□□□□□ -0.55
COL6A4P1-201ENST00000446690 COL14A1Q05707 1796 aaKnown RBP11.6□□□□□ -0.55
COL6A4P1-201ENST00000446690 AHDC1Q5TGY3 1603 aaPredicted RBP11.6□□□□□ -0.55
COL6A4P1-201ENST00000446690 K7ELQ4 463 aaPredicted RBP11.6□□□□□ -0.55
COL6A4P1-201ENST00000446690 DDB1Q16531 1140 aa11.6□□□□□ -0.55
COL6A4P1-201ENST00000446690 TNS2Q63HR2 1409 aa11.6□□□□□ -0.55
COL6A4P1-201ENST00000446690 KIF6Q6ZMV9 814 aa11.6□□□□□ -0.55
COL6A4P1-201ENST00000446690 ACSBG1Q96GR2 724 aa11.6□□□□□ -0.55
COL6A4P1-201ENST00000446690 TLR7Q9NYK1 1049 aaKnown RBP11.6□□□□□ -0.55
COL6A4P1-201ENST00000446690 DISP2A7MBM2 1401 aa11.59□□□□□ -0.55
COL6A4P1-201ENST00000446690 H7C1W4 665 aa11.59□□□□□ -0.55
COL6A4P1-201ENST00000446690 MCCP23508 829 aa11.59□□□□□ -0.55
COL6A4P1-201ENST00000446690 CASP7P55210 303 aa11.59□□□□□ -0.55
COL6A4P1-201ENST00000446690 PTPN12Q05209 780 aaKnown RBP11.59□□□□□ -0.55
COL6A4P1-201ENST00000446690 CWC27Q6UX04 472 aaKnown RBP11.59□□□□□ -0.55
COL6A4P1-201ENST00000446690 VSIG10Q8N0Z9 540 aa11.59□□□□□ -0.55
COL6A4P1-201ENST00000446690 CHMP5Q9NZZ3 219 aa11.59□□□□□ -0.55
COL6A4P1-201ENST00000446690 SHANK3Q9BYB0 1731 aa11.59□□□□□ -0.55
COL6A4P1-201ENST00000446690 GLI3P10071 1580 aa11.59□□□□□ -0.55
COL6A4P1-201ENST00000446690 SPATA31A1Q5TZJ5 1347 aa11.59□□□□□ -0.55
COL6A4P1-201ENST00000446690 UBAP1LF5GYI3 381 aa11.59□□□□□ -0.55
COL6A4P1-201ENST00000446690 CCDC191Q8NCU4 936 aa11.59□□□□□ -0.55
COL6A4P1-201ENST00000446690 IL25Q9H293 177 aa11.59□□□□□ -0.55
COL6A4P1-201ENST00000446690 USP42Q9H9J4 1324 aaKnown RBP11.58□□□□□ -0.56
COL6A4P1-201ENST00000446690 RFX5P48382 616 aaPredicted RBP11.58□□□□□ -0.56
COL6A4P1-201ENST00000446690 FOXO4P98177 505 aa11.58□□□□□ -0.56
COL6A4P1-201ENST00000446690 TFCP2Q12800 502 aa11.58□□□□□ -0.56
COL6A4P1-201ENST00000446690 RABL6Q3YEC7 729 aaPredicted RBP11.58□□□□□ -0.56
COL6A4P1-201ENST00000446690 BOLA2Q9H3K6 86 aa11.58□□□□□ -0.56
COL6A4P1-201ENST00000446690 COPRSQ9NQ92 184 aa11.58□□□□□ -0.56
COL6A4P1-201ENST00000446690 ST18O60284 1047 aa11.58□□□□□ -0.56
COL6A4P1-201ENST00000446690 TCIRG1Q13488 830 aa11.58□□□□□ -0.56
COL6A4P1-201ENST00000446690 SLC4A9Q96Q91 983 aa11.58□□□□□ -0.56
COL6A4P1-201ENST00000446690 COL16A1Q07092 1604 aaPredicted RBP11.57□□□□□ -0.56
COL6A4P1-201ENST00000446690 TOGARAM1Q9Y4F4 1720 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms