RNA–Protein interactions for RNA: ENST00000446550.1

ESR1-209, Transcript of estrogen receptor 1, humanhuman

TSL 1 (best)

Gene ESR1, Length 731 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ESR1-209ENST00000446550 CNTNAP1P78357 1384 aa20.52■□□□□ 0.88
ESR1-209ENST00000446550 A1BGP04217 495 aa20.52■□□□□ 0.88
ESR1-209ENST00000446550 CLEC4GQ6UXB4 293 aa20.52■□□□□ 0.88
ESR1-209ENST00000446550 DZIP3Q86Y13 1208 aaKnown RBP20.52■□□□□ 0.88
ESR1-209ENST00000446550 L3MBTL3Q96JM7 780 aaPredicted RBP20.52■□□□□ 0.88
ESR1-209ENST00000446550 CLEC11AQ9Y240 323 aa20.52■□□□□ 0.88
ESR1-209ENST00000446550 FER1L6Q2WGJ9 1857 aa20.52■□□□□ 0.87
ESR1-209ENST00000446550 BTBD11A6QL63 1104 aa20.51■□□□□ 0.87
ESR1-209ENST00000446550 CAMTA2O94983 1202 aa20.51■□□□□ 0.87
ESR1-209ENST00000446550 NPR1P16066 1061 aa20.51■□□□□ 0.87
ESR1-209ENST00000446550 TPTE2Q6XPS3 522 aa20.51■□□□□ 0.87
ESR1-209ENST00000446550 TAF1DQ9H5J8 278 aaPredicted RBP20.51■□□□□ 0.87
ESR1-209ENST00000446550 POTEIP0CG38 1075 aa20.5■□□□□ 0.87
ESR1-209ENST00000446550 POTEJP0CG39 1038 aa20.5■□□□□ 0.87
ESR1-209ENST00000446550 EAPPQ56P03 285 aaPredicted RBP20.5■□□□□ 0.87
ESR1-209ENST00000446550 CC2D1BQ5T0F9 858 aaKnown RBP20.5■□□□□ 0.87
ESR1-209ENST00000446550 PNMA8AQ86V59 439 aaPredicted RBP20.5■□□□□ 0.87
ESR1-209ENST00000446550 RTKN2Q8IZC4 609 aa20.5■□□□□ 0.87
ESR1-209ENST00000446550 VIRMAQ69YN4 1812 aaKnown RBP20.5■□□□□ 0.87
ESR1-209ENST00000446550 PASKQ96RG2 1323 aa20.5■□□□□ 0.87
ESR1-209ENST00000446550 UBR2Q8IWV8 1755 aa20.49■□□□□ 0.87
ESR1-209ENST00000446550 FOXN1O15353 648 aa20.49■□□□□ 0.87
ESR1-209ENST00000446550 HACL1Q9UJ83 578 aa20.49■□□□□ 0.87
ESR1-209ENST00000446550 ALDH1B1P30837 517 aa20.48■□□□□ 0.87
ESR1-209ENST00000446550 FKBP4Q02790 459 aaKnown RBP eCLIP20.48■□□□□ 0.87
ESR1-209ENST00000446550 ANKRD31Q8N7Z5 1873 aa20.47■□□□□ 0.87
ESR1-209ENST00000446550 ZEB1P37275 1124 aaPredicted RBP20.47■□□□□ 0.87
ESR1-209ENST00000446550 VEGFBP49765 207 aa20.47■□□□□ 0.87
ESR1-209ENST00000446550 RGL2O15211 777 aa20.46■□□□□ 0.87
ESR1-209ENST00000446550 GTF2E1P29083 439 aaPredicted RBP20.46■□□□□ 0.87
ESR1-209ENST00000446550 C7orf43Q8WVR3 580 aa20.46■□□□□ 0.87
ESR1-209ENST00000446550 SCN4AP35499 1836 aa20.46■□□□□ 0.87
ESR1-209ENST00000446550 PER1O15534 1290 aaPredicted RBP20.45■□□□□ 0.86
ESR1-209ENST00000446550 ITGBL1O95965 494 aaPredicted RBP20.45■□□□□ 0.86
ESR1-209ENST00000446550 SNRPA1P09661 255 aaKnown RBP20.45■□□□□ 0.86
ESR1-209ENST00000446550 EPHX2P34913 555 aa20.45■□□□□ 0.86
ESR1-209ENST00000446550 DEFB115Q30KQ5 88 aa20.45■□□□□ 0.86
ESR1-209ENST00000446550 RTF1Q92541 710 aaKnown RBP20.45■□□□□ 0.86
ESR1-209ENST00000446550 SCN7AQ01118 1682 aa20.45■□□□□ 0.86
ESR1-209ENST00000446550 SLX4Q8IY92 1834 aa20.44■□□□□ 0.86
ESR1-209ENST00000446550 KLRG2A4D1S0 409 aaPredicted RBP20.44■□□□□ 0.86
ESR1-209ENST00000446550 MAP2K1Q02750 393 aaPredicted RBP20.44■□□□□ 0.86
ESR1-209ENST00000446550 JDP2Q8WYK2 163 aa20.44■□□□□ 0.86
ESR1-209ENST00000446550 CNTROBQ8N137 903 aa20.43■□□□□ 0.86
ESR1-209ENST00000446550 CFAP53Q96M91 514 aa20.43■□□□□ 0.86
ESR1-209ENST00000446550 ZNF277Q9NRM2 450 aaPredicted RBP20.43■□□□□ 0.86
ESR1-209ENST00000446550 WBP1LQ9NX94 342 aa20.43■□□□□ 0.86
ESR1-209ENST00000446550 NIP7Q9Y221 180 aaKnown RBP eCLIP20.43■□□□□ 0.86
ESR1-209ENST00000446550 USP16Q9Y5T5 823 aa20.43■□□□□ 0.86
ESR1-209ENST00000446550 KIF7Q2M1P5 1343 aa20.43■□□□□ 0.86
ESR1-209ENST00000446550 GPC2Q8N158 579 aa20.42■□□□□ 0.86
ESR1-209ENST00000446550 NUDCQ9Y266 331 aa20.42■□□□□ 0.86
ESR1-209ENST00000446550 COL11A2P13942 1736 aaPredicted RBP20.41■□□□□ 0.86
ESR1-209ENST00000446550 IARSP41252 1262 aaKnown RBP20.41■□□□□ 0.86
ESR1-209ENST00000446550 LBX1P52954 281 aa20.41■□□□□ 0.86
ESR1-209ENST00000446550 CC2D2BQ6DHV5 1058 aa20.41■□□□□ 0.86
ESR1-209ENST00000446550 SYNE4Q8N205 404 aa20.41■□□□□ 0.86
ESR1-209ENST00000446550 CEMIPQ8WUJ3 1361 aa20.41■□□□□ 0.86
ESR1-209ENST00000446550 RASSF10A6NK89 507 aa20.4■□□□□ 0.86
ESR1-209ENST00000446550 FZD9O00144 591 aa20.4■□□□□ 0.86
ESR1-209ENST00000446550 KCNQ3O43525 872 aa20.4■□□□□ 0.86
ESR1-209ENST00000446550 EIF6P56537 245 aaKnown RBP20.4■□□□□ 0.86
ESR1-209ENST00000446550 GRIPAP1Q4V328 841 aa20.4■□□□□ 0.86
ESR1-209ENST00000446550 BEGAINQ9BUH8 593 aa20.4■□□□□ 0.86
ESR1-209ENST00000446550 ABT1Q9ULW3 272 aaKnown RBP20.4■□□□□ 0.86
ESR1-209ENST00000446550 LMOD1P29536 600 aaPredicted RBP20.39■□□□□ 0.85
ESR1-209ENST00000446550 WDR33Q9C0J8 1336 aaKnown RBP20.38■□□□□ 0.85
ESR1-209ENST00000446550 ZNF541Q9H0D2 1346 aa20.38■□□□□ 0.85
ESR1-209ENST00000446550 FAM177BA6PVY3 158 aa20.38■□□□□ 0.85
ESR1-209ENST00000446550 PRKAR2BP31323 418 aa20.38■□□□□ 0.85
ESR1-209ENST00000446550 CNGB1Q14028 1251 aaPredicted RBP20.38■□□□□ 0.85
ESR1-209ENST00000446550 MAP1SQ66K74 1059 aaPredicted RBP20.38■□□□□ 0.85
ESR1-209ENST00000446550 NYXQ9GZU5 481 aa20.38■□□□□ 0.85
ESR1-209ENST00000446550 NPC1L1Q9UHC9 1359 aa20.37■□□□□ 0.85
ESR1-209ENST00000446550 ARFGEF2Q9Y6D5 1785 aa20.37■□□□□ 0.85
ESR1-209ENST00000446550 RNF123Q5XPI4 1314 aa20.37■□□□□ 0.85
ESR1-209ENST00000446550 PIP4K2AP48426 406 aaPredicted RBP20.37■□□□□ 0.85
ESR1-209ENST00000446550 PHACTR3Q96KR7 559 aa20.37■□□□□ 0.85
ESR1-209ENST00000446550 PSMD1Q99460 953 aa20.37■□□□□ 0.85
ESR1-209ENST00000446550 ECE1P42892 770 aa20.36■□□□□ 0.85
ESR1-209ENST00000446550 TMX4Q9H1E5 349 aaPredicted RBP20.36■□□□□ 0.85
ESR1-209ENST00000446550 CACNA1SQ13698 1873 aa20.36■□□□□ 0.85
ESR1-209ENST00000446550 HTATSF1O43719 755 aaKnown RBP20.35■□□□□ 0.85
ESR1-209ENST00000446550 GJA3Q9Y6H8 435 aa20.35■□□□□ 0.85
ESR1-209ENST00000446550 SIPA1L3O60292 1781 aaPredicted RBP20.35■□□□□ 0.85
ESR1-209ENST00000446550 RPGRQ92834 1020 aaKnown RBP20.34■□□□□ 0.85
ESR1-209ENST00000446550 RSPH6AQ9H0K4 717 aa20.34■□□□□ 0.85
ESR1-209ENST00000446550 DDX21Q9NR30 783 aaKnown RBP eCLIP20.34■□□□□ 0.85
ESR1-209ENST00000446550 PRAMEF22A3QJZ6 481 aa20.33■□□□□ 0.85
ESR1-209ENST00000446550 HSPA8P11142 646 aaKnown RBP20.33■□□□□ 0.85
ESR1-209ENST00000446550 OLFM4Q6UX06 510 aa20.33■□□□□ 0.85
ESR1-209ENST00000446550 PAXIP1Q6ZW49 1069 aaPredicted RBP20.33■□□□□ 0.85
ESR1-209ENST00000446550 ABHD8Q96I13 439 aa20.33■□□□□ 0.85
ESR1-209ENST00000446550 BCORQ6W2J9 1755 aa20.33■□□□□ 0.84
ESR1-209ENST00000446550 COL3A1P02461 1466 aaPredicted RBP20.32■□□□□ 0.84
ESR1-209ENST00000446550 U2AF1L5P0DN76 240 aaPredicted RBP20.32■□□□□ 0.84
ESR1-209ENST00000446550 U2AF1Q01081 240 aaKnown RBP eCLIP20.32■□□□□ 0.84
ESR1-209ENST00000446550 TAF7Q15545 349 aaPredicted RBP20.32■□□□□ 0.84
ESR1-209ENST00000446550 MCM10Q7L590 875 aa20.32■□□□□ 0.84
ESR1-209ENST00000446550 NBPF26B4DH59 902 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms