RNA–Protein interactions for RNA: ENST00000445752.5

CCDC144B-202, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 2 BASIC

Gene CCDC144B, Length 2,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-202ENST00000445752 MAP4K4O95819 1239 aaPredicted RBP19.54■□□□□ 0.72
CCDC144B-202ENST00000445752 CHMLP26374 656 aa19.54■□□□□ 0.72
CCDC144B-202ENST00000445752 ERVV-2B6SEH9 535 aa19.54■□□□□ 0.72
CCDC144B-202ENST00000445752 PI4K2BQ8TCG2 481 aa19.54■□□□□ 0.72
CCDC144B-202ENST00000445752 GLI3P10071 1580 aa19.54■□□□□ 0.72
CCDC144B-202ENST00000445752 LAMB4A4D0S4 1761 aa19.53■□□□□ 0.72
CCDC144B-202ENST00000445752 GCKRQ14397 625 aa19.53■□□□□ 0.72
CCDC144B-202ENST00000445752 FOXD4L1Q9NU39 408 aa19.53■□□□□ 0.72
CCDC144B-202ENST00000445752 CLASRPQ8N2M8 674 aaKnown RBP19.53■□□□□ 0.72
CCDC144B-202ENST00000445752 NKX1-1Q15270 411 aaPredicted RBP19.52■□□□□ 0.72
CCDC144B-202ENST00000445752 SHANK3Q9BYB0 1731 aa19.52■□□□□ 0.72
CCDC144B-202ENST00000445752 ERC1Q8IUD2 1116 aa19.51■□□□□ 0.71
CCDC144B-202ENST00000445752 DDIT3P35638 169 aa19.51■□□□□ 0.71
CCDC144B-202ENST00000445752 AK9Q5TCS8 1911 aa19.51■□□□□ 0.71
CCDC144B-202ENST00000445752 PTCD1O75127 700 aaKnown RBP19.5■□□□□ 0.71
CCDC144B-202ENST00000445752 GSE1Q14687 1217 aa19.5■□□□□ 0.71
CCDC144B-202ENST00000445752 JARID2Q92833 1246 aaPredicted RBP19.5■□□□□ 0.71
CCDC144B-202ENST00000445752 ANO2Q9NQ90 1003 aa19.5■□□□□ 0.71
CCDC144B-202ENST00000445752 BTG4Q9NY30 223 aa19.5■□□□□ 0.71
CCDC144B-202ENST00000445752 ARFGEF2Q9Y6D5 1785 aa19.5■□□□□ 0.71
CCDC144B-202ENST00000445752 AFDNP55196 1824 aaKnown RBP19.49■□□□□ 0.71
CCDC144B-202ENST00000445752 ATP5J2-PTCD1G3V325 749 aa19.49■□□□□ 0.71
CCDC144B-202ENST00000445752 UBR2Q8IWV8 1755 aa19.49■□□□□ 0.71
CCDC144B-202ENST00000445752 NBPF26B4DH59 902 aa19.49■□□□□ 0.71
CCDC144B-202ENST00000445752 G3BP1Q13283 466 aaKnown RBP eCLIP19.49■□□□□ 0.71
CCDC144B-202ENST00000445752 NBPF14Q5TI25 921 aa19.49■□□□□ 0.71
CCDC144B-202ENST00000445752 NBPF10Q6P3W6 841 aaKnown RBP19.49■□□□□ 0.71
CCDC144B-202ENST00000445752 NBPF15Q8N660 670 aa19.49■□□□□ 0.71
CCDC144B-202ENST00000445752 SIL1Q9H173 461 aa19.49■□□□□ 0.71
CCDC144B-202ENST00000445752 IFIT2P09913 472 aaKnown RBP19.48■□□□□ 0.71
CCDC144B-202ENST00000445752 EPHA10Q5JZY3 1008 aa19.48■□□□□ 0.71
CCDC144B-202ENST00000445752 CNTROBQ8N137 903 aa19.48■□□□□ 0.71
CCDC144B-202ENST00000445752 PLBD2Q8NHP8 589 aa19.48■□□□□ 0.71
CCDC144B-202ENST00000445752 TTC41PQ6P2S7 1318 aa19.48■□□□□ 0.71
CCDC144B-202ENST00000445752 KCPQ6ZWJ8 1503 aa19.48■□□□□ 0.71
CCDC144B-202ENST00000445752 AACSQ86V21 672 aa19.47■□□□□ 0.71
CCDC144B-202ENST00000445752 USP42Q9H9J4 1324 aaKnown RBP19.47■□□□□ 0.71
CCDC144B-202ENST00000445752 ST18O60284 1047 aa19.47■□□□□ 0.71
CCDC144B-202ENST00000445752 A1BGP04217 495 aa19.47■□□□□ 0.71
CCDC144B-202ENST00000445752 UBE3BQ7Z3V4 1068 aa19.47■□□□□ 0.71
CCDC144B-202ENST00000445752 KLHDC4Q8TBB5 520 aa19.47■□□□□ 0.71
CCDC144B-202ENST00000445752 ERBB4Q15303 1308 aa19.47■□□□□ 0.71
CCDC144B-202ENST00000445752 PAPPAQ13219 1627 aa19.47■□□□□ 0.71
CCDC144B-202ENST00000445752 GLRX3O76003 335 aaKnown RBP19.46■□□□□ 0.71
CCDC144B-202ENST00000445752 SASH1O94885 1247 aa19.46■□□□□ 0.71
CCDC144B-202ENST00000445752 MCCP23508 829 aa19.46■□□□□ 0.71
CCDC144B-202ENST00000445752 GPATCH3Q96I76 525 aa19.46■□□□□ 0.71
CCDC144B-202ENST00000445752 IL25Q9H293 177 aa19.46■□□□□ 0.71
CCDC144B-202ENST00000445752 MCM4P33991 863 aa19.46■□□□□ 0.71
CCDC144B-202ENST00000445752 ECHDC1Q9NTX5 307 aa19.46■□□□□ 0.71
CCDC144B-202ENST00000445752 CIZ1Q9ULV3 898 aaPredicted RBP19.46■□□□□ 0.71
CCDC144B-202ENST00000445752 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.46■□□□□ 0.71
CCDC144B-202ENST00000445752 A0A087WZG4 1122 aa19.45■□□□□ 0.7
CCDC144B-202ENST00000445752 TMOD3Q9NYL9 352 aa19.45■□□□□ 0.7
CCDC144B-202ENST00000445752 TOGARAM1Q9Y4F4 1720 aa19.45■□□□□ 0.7
CCDC144B-202ENST00000445752 TTLL7Q6ZT98 887 aa19.44■□□□□ 0.7
CCDC144B-202ENST00000445752 ROBO1Q9Y6N7 1651 aa19.44■□□□□ 0.7
CCDC144B-202ENST00000445752 PALD1Q9ULE6 856 aa19.43■□□□□ 0.7
CCDC144B-202ENST00000445752 TNS2Q63HR2 1409 aa19.43■□□□□ 0.7
CCDC144B-202ENST00000445752 EAF2Q96CJ1 260 aaPredicted RBP19.43■□□□□ 0.7
CCDC144B-202ENST00000445752 CCDC8Q9H0W5 538 aaPredicted RBP19.43■□□□□ 0.7
CCDC144B-202ENST00000445752 NEK4P51957 841 aa19.42■□□□□ 0.7
CCDC144B-202ENST00000445752 TNPO1Q92973 898 aaKnown RBP19.42■□□□□ 0.7
CCDC144B-202ENST00000445752 ZBTB3Q9H5J0 574 aa19.42■□□□□ 0.7
CCDC144B-202ENST00000445752 RAB3GAP1Q15042 981 aa19.41■□□□□ 0.7
CCDC144B-202ENST00000445752 CWC27Q6UX04 472 aaKnown RBP19.41■□□□□ 0.7
CCDC144B-202ENST00000445752 TLR7Q9NYK1 1049 aaKnown RBP19.41■□□□□ 0.7
CCDC144B-202ENST00000445752 SGSM2O43147 1006 aa19.4■□□□□ 0.7
CCDC144B-202ENST00000445752 COL14A1Q05707 1796 aaKnown RBP19.4■□□□□ 0.7
CCDC144B-202ENST00000445752 ANAPC15P60006 121 aa19.4■□□□□ 0.7
CCDC144B-202ENST00000445752 ASAP1Q9ULH1 1129 aa19.4■□□□□ 0.7
CCDC144B-202ENST00000445752 NUP188Q5SRE5 1749 aa19.39■□□□□ 0.7
CCDC144B-202ENST00000445752 CASP7P55210 303 aa19.39■□□□□ 0.69
CCDC144B-202ENST00000445752 RABL6Q3YEC7 729 aaPredicted RBP19.39■□□□□ 0.69
CCDC144B-202ENST00000445752 PIGBQ92521 554 aa19.39■□□□□ 0.69
CCDC144B-202ENST00000445752 DIAPH3Q9NSV4 1193 aa19.39■□□□□ 0.69
CCDC144B-202ENST00000445752 ZNF330Q9Y3S2 320 aaPredicted RBP19.39■□□□□ 0.69
CCDC144B-202ENST00000445752 RFX5P48382 616 aaPredicted RBP19.39■□□□□ 0.69
CCDC144B-202ENST00000445752 PTPN12Q05209 780 aaKnown RBP19.39■□□□□ 0.69
CCDC144B-202ENST00000445752 COPRSQ9NQ92 184 aa19.39■□□□□ 0.69
CCDC144B-202ENST00000445752 CWC25Q9NXE8 425 aaPredicted RBP19.39■□□□□ 0.69
CCDC144B-202ENST00000445752 COL15A1P39059 1388 aa19.38■□□□□ 0.69
CCDC144B-202ENST00000445752 EVI5LQ96CN4 794 aa19.37■□□□□ 0.69
CCDC144B-202ENST00000445752 CHMP3Q9Y3E7 222 aa19.37■□□□□ 0.69
CCDC144B-202ENST00000445752 EPB41L2O43491 1005 aaKnown RBP19.37■□□□□ 0.69
CCDC144B-202ENST00000445752 HSPA4P34932 840 aa19.37■□□□□ 0.69
CCDC144B-202ENST00000445752 LMBR1LQ6UX01 489 aa19.37■□□□□ 0.69
CCDC144B-202ENST00000445752 KIAA1211Q6ZU35 1233 aa19.37■□□□□ 0.69
CCDC144B-202ENST00000445752 RAD50Q92878 1312 aa19.37■□□□□ 0.69
CCDC144B-202ENST00000445752 AHDC1Q5TGY3 1603 aaPredicted RBP19.36■□□□□ 0.69
CCDC144B-202ENST00000445752 H7C1W4 665 aa19.36■□□□□ 0.69
CCDC144B-202ENST00000445752 DISP2A7MBM2 1401 aa19.36■□□□□ 0.69
CCDC144B-202ENST00000445752 COL16A1Q07092 1604 aaPredicted RBP19.36■□□□□ 0.69
CCDC144B-202ENST00000445752 DDX11L8A8MPP1 907 aa19.36■□□□□ 0.69
CCDC144B-202ENST00000445752 SSFA2P28290 1259 aa19.36■□□□□ 0.69
CCDC144B-202ENST00000445752 RUFY2Q8WXA3 655 aa19.36■□□□□ 0.69
CCDC144B-202ENST00000445752 GBP4Q96PP9 640 aa19.36■□□□□ 0.69
CCDC144B-202ENST00000445752 LSG1Q9H089 658 aaKnown RBP19.36■□□□□ 0.69
CCDC144B-202ENST00000445752 BOLA2Q9H3K6 86 aa19.36■□□□□ 0.69
CCDC144B-202ENST00000445752 ATG3Q9NT62 314 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms