RNA–Protein interactions for RNA: ENST00000442952.1

SEC23IP-202, Transcript of SEC23 interacting protein, humanhuman

TSL 2

Gene SEC23IP, Length 782 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23IP-202ENST00000442952 COL3A1P02461 1466 aaPredicted RBP11.17□□□□□ -0.62
SEC23IP-202ENST00000442952 BCORQ6W2J9 1755 aa11.16□□□□□ -0.62
SEC23IP-202ENST00000442952 ARFGEF2Q9Y6D5 1785 aa11.16□□□□□ -0.62
SEC23IP-202ENST00000442952 POTECB2RU33 542 aa11.16□□□□□ -0.62
SEC23IP-202ENST00000442952 DIAPH1O60610 1272 aaKnown RBP11.16□□□□□ -0.62
SEC23IP-202ENST00000442952 PDE6BP35913 854 aa11.16□□□□□ -0.62
SEC23IP-202ENST00000442952 TBC1D9BQ66K14 1250 aa11.16□□□□□ -0.62
SEC23IP-202ENST00000442952 DPY19L2Q6NUT2 758 aa11.16□□□□□ -0.62
SEC23IP-202ENST00000442952 BICDL1Q6ZP65 573 aa11.16□□□□□ -0.62
SEC23IP-202ENST00000442952 BRIP1Q9BX63 1249 aa11.16□□□□□ -0.62
SEC23IP-202ENST00000442952 ERFEQ4G0M1 354 aa11.15□□□□□ -0.62
SEC23IP-202ENST00000442952 PRR5LQ6MZQ0 368 aa11.15□□□□□ -0.62
SEC23IP-202ENST00000442952 ZNF622Q969S3 477 aaKnown RBP eCLIP11.15□□□□□ -0.62
SEC23IP-202ENST00000442952 ZNF496Q96IT1 587 aaPredicted RBP11.15□□□□□ -0.62
SEC23IP-202ENST00000442952 TEX13AQ9BXU3 409 aaPredicted RBP11.15□□□□□ -0.62
SEC23IP-202ENST00000442952 C21orf2O43822 256 aa11.14□□□□□ -0.63
SEC23IP-202ENST00000442952 IL6STP40189 918 aaPredicted RBP11.14□□□□□ -0.63
SEC23IP-202ENST00000442952 ZNF790Q6PG37 636 aa11.14□□□□□ -0.63
SEC23IP-202ENST00000442952 GAS2L2Q8NHY3 880 aa11.14□□□□□ -0.63
SEC23IP-202ENST00000442952 TAOK3Q9H2K8 898 aa11.14□□□□□ -0.63
SEC23IP-202ENST00000442952 KIF7Q2M1P5 1343 aa11.13□□□□□ -0.63
SEC23IP-202ENST00000442952 TEFQ10587 303 aa11.13□□□□□ -0.63
SEC23IP-202ENST00000442952 SOGA3Q5TF21 947 aa11.13□□□□□ -0.63
SEC23IP-202ENST00000442952 STYK1Q6J9G0 422 aa11.13□□□□□ -0.63
SEC23IP-202ENST00000442952 CNBD1Q8NA66 436 aa11.13□□□□□ -0.63
SEC23IP-202ENST00000442952 CNKSR1Q969H4 720 aa11.13□□□□□ -0.63
SEC23IP-202ENST00000442952 PCGF6Q9BYE7 350 aa11.13□□□□□ -0.63
SEC23IP-202ENST00000442952 CREBZFQ9NS37 354 aa11.13□□□□□ -0.63
SEC23IP-202ENST00000442952 CEMIPQ8WUJ3 1361 aa11.13□□□□□ -0.63
SEC23IP-202ENST00000442952 C19orf67A6NJJ6 358 aa11.12□□□□□ -0.63
SEC23IP-202ENST00000442952 GNAT3A8MTJ3 354 aa11.12□□□□□ -0.63
SEC23IP-202ENST00000442952 PER1O15534 1290 aaPredicted RBP11.12□□□□□ -0.63
SEC23IP-202ENST00000442952 CAMTA2O94983 1202 aa11.12□□□□□ -0.63
SEC23IP-202ENST00000442952 SRGNP10124 158 aa11.12□□□□□ -0.63
SEC23IP-202ENST00000442952 ST5P78524 1137 aa11.12□□□□□ -0.63
SEC23IP-202ENST00000442952 IL17REQ8NFR9 667 aa11.12□□□□□ -0.63
SEC23IP-202ENST00000442952 FMNL2Q96PY5 1086 aa11.12□□□□□ -0.63
SEC23IP-202ENST00000442952 TBC1D2BQ9UPU7 963 aa11.12□□□□□ -0.63
SEC23IP-202ENST00000442952 ZNF330Q9Y3S2 320 aaPredicted RBP11.12□□□□□ -0.63
SEC23IP-202ENST00000442952 FARP1Q9Y4F1 1045 aaPredicted RBP11.12□□□□□ -0.63
SEC23IP-202ENST00000442952 CACNA1SQ13698 1873 aa11.12□□□□□ -0.63
SEC23IP-202ENST00000442952 NPC1L1Q9UHC9 1359 aa11.12□□□□□ -0.63
SEC23IP-202ENST00000442952 SLX4Q8IY92 1834 aa11.12□□□□□ -0.63
SEC23IP-202ENST00000442952 PRPF40BQ6NWY9 871 aaKnown RBP11.11□□□□□ -0.63
SEC23IP-202ENST00000442952 CCDC24Q8N4L8 307 aa11.11□□□□□ -0.63
SEC23IP-202ENST00000442952 SETDB2Q96T68 719 aa11.11□□□□□ -0.63
SEC23IP-202ENST00000442952 SCN4AP35499 1836 aa11.1□□□□□ -0.63
SEC23IP-202ENST00000442952 IQCA1LA6NCM1 817 aa11.1□□□□□ -0.63
SEC23IP-202ENST00000442952 NPHP1O15259 732 aa11.1□□□□□ -0.63
SEC23IP-202ENST00000442952 DDNO94850 711 aaPredicted RBP11.1□□□□□ -0.63
SEC23IP-202ENST00000442952 CC2D1BQ5T0F9 858 aaKnown RBP11.1□□□□□ -0.63
SEC23IP-202ENST00000442952 NPM2Q86SE8 214 aaKnown RBP11.1□□□□□ -0.63
SEC23IP-202ENST00000442952 MASTLQ96GX5 879 aa11.1□□□□□ -0.63
SEC23IP-202ENST00000442952 L3MBTL3Q96JM7 780 aaPredicted RBP11.1□□□□□ -0.63
SEC23IP-202ENST00000442952 CNTNAP1P78357 1384 aa11.1□□□□□ -0.63
SEC23IP-202ENST00000442952 PASKQ96RG2 1323 aa11.09□□□□□ -0.63
SEC23IP-202ENST00000442952 U2SURPO15042 1029 aaKnown RBP11.09□□□□□ -0.63
SEC23IP-202ENST00000442952 A1BGP04217 495 aa11.09□□□□□ -0.63
SEC23IP-202ENST00000442952 POTEIP0CG38 1075 aa11.09□□□□□ -0.63
SEC23IP-202ENST00000442952 POTEJP0CG39 1038 aa11.09□□□□□ -0.63
SEC23IP-202ENST00000442952 LDHDQ86WU2 507 aa11.09□□□□□ -0.63
SEC23IP-202ENST00000442952 DZIP3Q86Y13 1208 aaKnown RBP11.09□□□□□ -0.63
SEC23IP-202ENST00000442952 MKRN1Q9UHC7 482 aaKnown RBP11.09□□□□□ -0.63
SEC23IP-202ENST00000442952 ADAMTSL1Q8N6G6 1762 aa11.08□□□□□ -0.64
SEC23IP-202ENST00000442952 RGL2O15211 777 aa11.08□□□□□ -0.64
SEC23IP-202ENST00000442952 CCDC93Q567U6 631 aa11.08□□□□□ -0.64
SEC23IP-202ENST00000442952 CLEC4GQ6UXB4 293 aa11.08□□□□□ -0.64
SEC23IP-202ENST00000442952 C7orf43Q8WVR3 580 aa11.08□□□□□ -0.64
SEC23IP-202ENST00000442952 BTBD11A6QL63 1104 aa11.07□□□□□ -0.64
SEC23IP-202ENST00000442952 KCNQ3O43525 872 aa11.07□□□□□ -0.64
SEC23IP-202ENST00000442952 NPR1P16066 1061 aa11.07□□□□□ -0.64
SEC23IP-202ENST00000442952 NBPF5PQ86XG9 351 aaPredicted RBP11.07□□□□□ -0.64
SEC23IP-202ENST00000442952 TAF1DQ9H5J8 278 aaPredicted RBP11.07□□□□□ -0.64
SEC23IP-202ENST00000442952 ZNF652Q9Y2D9 606 aa11.07□□□□□ -0.64
SEC23IP-202ENST00000442952 PCNTO95613 3336 aa11.07□□□□□ -0.64
SEC23IP-202ENST00000442952 KLRG2A4D1S0 409 aaPredicted RBP11.06□□□□□ -0.64
SEC23IP-202ENST00000442952 FKBP4Q02790 459 aaKnown RBP eCLIP11.06□□□□□ -0.64
SEC23IP-202ENST00000442952 PRDM10Q9NQV6 1147 aa11.06□□□□□ -0.64
SEC23IP-202ENST00000442952 USP16Q9Y5T5 823 aa11.06□□□□□ -0.64
SEC23IP-202ENST00000442952 ZNF541Q9H0D2 1346 aa11.06□□□□□ -0.64
SEC23IP-202ENST00000442952 FOXN1O15353 648 aa11.05□□□□□ -0.64
SEC23IP-202ENST00000442952 SNRPA1P09661 255 aaKnown RBP11.05□□□□□ -0.64
SEC23IP-202ENST00000442952 PRKAR2BP31323 418 aa11.05□□□□□ -0.64
SEC23IP-202ENST00000442952 SNED1Q8TER0 1413 aa11.05□□□□□ -0.64
SEC23IP-202ENST00000442952 PHACTR3Q96KR7 559 aa11.05□□□□□ -0.64
SEC23IP-202ENST00000442952 RSPH6AQ9H0K4 717 aa11.05□□□□□ -0.64
SEC23IP-202ENST00000442952 LAMB4A4D0S4 1761 aa11.05□□□□□ -0.64
SEC23IP-202ENST00000442952 TMEM88BA6NKF7 163 aa11.04□□□□□ -0.64
SEC23IP-202ENST00000442952 ITGBL1O95965 494 aaPredicted RBP11.04□□□□□ -0.64
SEC23IP-202ENST00000442952 CD44P16070 742 aaKnown RBP11.04□□□□□ -0.64
SEC23IP-202ENST00000442952 PIP4K2AP48426 406 aaPredicted RBP11.04□□□□□ -0.64
SEC23IP-202ENST00000442952 TPTE2Q6XPS3 522 aa11.04□□□□□ -0.64
SEC23IP-202ENST00000442952 RTKN2Q8IZC4 609 aa11.04□□□□□ -0.64
SEC23IP-202ENST00000442952 CCER1Q8TC90 406 aaPredicted RBP11.04□□□□□ -0.64
SEC23IP-202ENST00000442952 HACL1Q9UJ83 578 aa11.04□□□□□ -0.64
SEC23IP-202ENST00000442952 PRAMEF22A3QJZ6 481 aa11.03□□□□□ -0.64
SEC23IP-202ENST00000442952 EPHX2P34913 555 aa11.03□□□□□ -0.64
SEC23IP-202ENST00000442952 CTCFP49711 727 aaPredicted RBP11.03□□□□□ -0.64
SEC23IP-202ENST00000442952 PNMA8AQ86V59 439 aaPredicted RBP11.03□□□□□ -0.64
SEC23IP-202ENST00000442952 AIDAQ96BJ3 306 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms