RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 UBTFL1P0CB47 393 aaPredicted RBP10.08□□□□□ -0.8
CCDC39-201ENST00000442201 SIRT2Q8IXJ6 389 aa10.08□□□□□ -0.8
CCDC39-201ENST00000442201 KCNQ2O43526 872 aa10.08□□□□□ -0.8
CCDC39-201ENST00000442201 CEP85Q6P2H3 762 aa10.08□□□□□ -0.8
CCDC39-201ENST00000442201 DOT1LQ8TEK3 1739 aa10.07□□□□□ -0.8
CCDC39-201ENST00000442201 SKAP1Q86WV1 359 aa10.07□□□□□ -0.8
CCDC39-201ENST00000442201 SEPT12Q8IYM1 358 aa10.07□□□□□ -0.8
CCDC39-201ENST00000442201 KLHL34Q8N239 644 aa10.07□□□□□ -0.8
CCDC39-201ENST00000442201 PLBD2Q8NHP8 589 aa10.07□□□□□ -0.8
CCDC39-201ENST00000442201 GCC1Q96CN9 775 aa10.07□□□□□ -0.8
CCDC39-201ENST00000442201 SLC4A9Q96Q91 983 aa10.07□□□□□ -0.8
CCDC39-201ENST00000442201 HMMRO75330 724 aa10.07□□□□□ -0.8
CCDC39-201ENST00000442201 METTL22Q9BUU2 404 aaPredicted RBP10.07□□□□□ -0.8
CCDC39-201ENST00000442201 PDZRN3Q9UPQ7 1066 aa10.07□□□□□ -0.8
CCDC39-201ENST00000442201 LAMB4A4D0S4 1761 aa10.07□□□□□ -0.8
CCDC39-201ENST00000442201 THSD7AQ9UPZ6 1657 aa10.07□□□□□ -0.8
CCDC39-201ENST00000442201 ITGB4P16144 1822 aa10.07□□□□□ -0.8
CCDC39-201ENST00000442201 RGS3P49796 1198 aa10.06□□□□□ -0.8
CCDC39-201ENST00000442201 C9orf78Q9NZ63 289 aaPredicted RBP10.06□□□□□ -0.8
CCDC39-201ENST00000442201 HDAC5Q9UQL6 1122 aa10.06□□□□□ -0.8
CCDC39-201ENST00000442201 LOC102724428A0A0B4J2F2 783 aa10.06□□□□□ -0.8
CCDC39-201ENST00000442201 CYP19A1P11511 503 aaPredicted RBP10.06□□□□□ -0.8
CCDC39-201ENST00000442201 SIK1P57059 783 aa10.06□□□□□ -0.8
CCDC39-201ENST00000442201 CWF19L2Q2TBE0 894 aaKnown RBP10.06□□□□□ -0.8
CCDC39-201ENST00000442201 PALLDQ8WX93 1383 aa10.06□□□□□ -0.8
CCDC39-201ENST00000442201 ZNF772Q68DY9 489 aaPredicted RBP10.06□□□□□ -0.8
CCDC39-201ENST00000442201 MYD88Q99836 296 aa10.06□□□□□ -0.8
CCDC39-201ENST00000442201 LRRFIP2Q9Y608 721 aaKnown RBP10.06□□□□□ -0.8
CCDC39-201ENST00000442201 ATP6V1AP38606 617 aa10.05□□□□□ -0.8
CCDC39-201ENST00000442201 TTLL7Q6ZT98 887 aa10.05□□□□□ -0.8
CCDC39-201ENST00000442201 ZNF330Q9Y3S2 320 aaPredicted RBP10.05□□□□□ -0.8
CCDC39-201ENST00000442201 IGKV5-2P06315 115 aa10.05□□□□□ -0.8
CCDC39-201ENST00000442201 NBPF7P0C2Y1 421 aaPredicted RBP10.05□□□□□ -0.8
CCDC39-201ENST00000442201 KAT6BQ8WYB5 2073 aa10.04□□□□□ -0.8
CCDC39-201ENST00000442201 GRM8O00222 908 aa10.04□□□□□ -0.8
CCDC39-201ENST00000442201 FAM182BQ5T319 152 aa10.04□□□□□ -0.8
CCDC39-201ENST00000442201 NPM2Q86SE8 214 aaKnown RBP10.04□□□□□ -0.8
CCDC39-201ENST00000442201 NEURL1BA8MQ27 555 aa10.04□□□□□ -0.8
CCDC39-201ENST00000442201 DCTPP1Q9H773 170 aa10.04□□□□□ -0.8
CCDC39-201ENST00000442201 PRDM4Q9UKN5 801 aa10.04□□□□□ -0.8
CCDC39-201ENST00000442201 IBTKQ9P2D0 1353 aaPredicted RBP10.04□□□□□ -0.8
CCDC39-201ENST00000442201 ATP8B2P98198 1209 aa10.04□□□□□ -0.8
CCDC39-201ENST00000442201 ZBTB3Q9H5J0 574 aa10.04□□□□□ -0.8
CCDC39-201ENST00000442201 ZBTB1Q9Y2K1 713 aa10.04□□□□□ -0.8
CCDC39-201ENST00000442201 NUCB1Q02818 461 aa10.03□□□□□ -0.8
CCDC39-201ENST00000442201 GCKRQ14397 625 aa10.03□□□□□ -0.8
CCDC39-201ENST00000442201 KIF6Q6ZMV9 814 aa10.03□□□□□ -0.8
CCDC39-201ENST00000442201 RBM6P78332 1123 aaKnown RBP10.03□□□□□ -0.8
CCDC39-201ENST00000442201 ANKRD45Q5TZF3 282 aa10.03□□□□□ -0.8
CCDC39-201ENST00000442201 N4BP2Q86UW6 1770 aaPredicted RBP10.03□□□□□ -0.8
CCDC39-201ENST00000442201 UTYO14607 1347 aa10.02□□□□□ -0.8
CCDC39-201ENST00000442201 IL6STP40189 918 aaPredicted RBP10.02□□□□□ -0.8
CCDC39-201ENST00000442201 HSP90AA2PQ14568 343 aaPredicted RBP10.02□□□□□ -0.8
CCDC39-201ENST00000442201 CHD1LQ86WJ1 897 aa10.02□□□□□ -0.8
CCDC39-201ENST00000442201 FBXO41Q8TF61 875 aa10.02□□□□□ -0.8
CCDC39-201ENST00000442201 CCDC87Q9NVE4 849 aa10.02□□□□□ -0.8
CCDC39-201ENST00000442201 ZBTB47Q9UFB7 747 aaPredicted RBP10.02□□□□□ -0.8
CCDC39-201ENST00000442201 ATP5J2-PTCD1G3V325 749 aa10.02□□□□□ -0.81
CCDC39-201ENST00000442201 ITPK1Q13572 414 aa10.02□□□□□ -0.81
CCDC39-201ENST00000442201 PTF1AQ7RTS3 328 aa10.02□□□□□ -0.81
CCDC39-201ENST00000442201 LNPKQ9C0E8 428 aa10.02□□□□□ -0.81
CCDC39-201ENST00000442201 PNMA6EA0A0J9YXQ4 647 aa10.01□□□□□ -0.81
CCDC39-201ENST00000442201 CRKLP46109 303 aaKnown RBP10.01□□□□□ -0.81
CCDC39-201ENST00000442201 KRT27Q7Z3Y8 459 aa10.01□□□□□ -0.81
CCDC39-201ENST00000442201 GSE1Q14687 1217 aa10.01□□□□□ -0.81
CCDC39-201ENST00000442201 PPP1R42Q7Z4L9 355 aa10.01□□□□□ -0.81
CCDC39-201ENST00000442201 SSH3Q8TE77 659 aa10.01□□□□□ -0.81
CCDC39-201ENST00000442201 MAP3K15Q6ZN16 1313 aa10.01□□□□□ -0.81
CCDC39-201ENST00000442201 A0A087WZG4 1122 aa10.01□□□□□ -0.81
CCDC39-201ENST00000442201 SRGAP3O43295 1099 aa10.01□□□□□ -0.81
CCDC39-201ENST00000442201 INTS5Q6P9B9 1019 aaKnown RBP10.01□□□□□ -0.81
CCDC39-201ENST00000442201 FAM196AQ6ZSG2 479 aa10.01□□□□□ -0.81
CCDC39-201ENST00000442201 CWC25Q9NXE8 425 aaPredicted RBP10.01□□□□□ -0.81
CCDC39-201ENST00000442201 ANP32AP39687 249 aaKnown RBP10□□□□□ -0.81
CCDC39-201ENST00000442201 EIF5P55010 431 aaKnown RBP10□□□□□ -0.81
CCDC39-201ENST00000442201 TCIRG1Q13488 830 aa10□□□□□ -0.81
CCDC39-201ENST00000442201 MTX1Q13505 466 aa10□□□□□ -0.81
CCDC39-201ENST00000442201 CCDC191Q8NCU4 936 aa10□□□□□ -0.81
CCDC39-201ENST00000442201 PDE4AP27815 886 aa10□□□□□ -0.81
CCDC39-201ENST00000442201 DZIP3Q86Y13 1208 aaKnown RBP10□□□□□ -0.81
CCDC39-201ENST00000442201 SUCLG2Q96I99 432 aa10□□□□□ -0.81
CCDC39-201ENST00000442201 HSP90AB3PQ58FF7 597 aa9.99□□□□□ -0.81
CCDC39-201ENST00000442201 GIGYF2Q6Y7W6 1299 aaKnown RBP9.99□□□□□ -0.81
CCDC39-201ENST00000442201 UBE3BQ7Z3V4 1068 aa9.99□□□□□ -0.81
CCDC39-201ENST00000442201 TJP1Q07157 1748 aa9.99□□□□□ -0.81
CCDC39-201ENST00000442201 TRIM28Q13263 835 aaKnown RBP9.99□□□□□ -0.81
CCDC39-201ENST00000442201 POLA2Q14181 598 aa9.99□□□□□ -0.81
CCDC39-201ENST00000442201 ISCA1Q9BUE6 129 aa9.99□□□□□ -0.81
CCDC39-201ENST00000442201 EXOC6BQ9Y2D4 811 aa9.99□□□□□ -0.81
CCDC39-201ENST00000442201 ERVV-1B6SEH8 477 aa9.99□□□□□ -0.81
CCDC39-201ENST00000442201 APBB1O00213 710 aa9.99□□□□□ -0.81
CCDC39-201ENST00000442201 TBC1D2BQ9UPU7 963 aa9.99□□□□□ -0.81
CCDC39-201ENST00000442201 RXRBP28702 533 aa9.98□□□□□ -0.81
CCDC39-201ENST00000442201 KAZALD1Q96I82 304 aa9.98□□□□□ -0.81
CCDC39-201ENST00000442201 BICC1Q9H694 974 aaKnown RBP9.98□□□□□ -0.81
CCDC39-201ENST00000442201 CCNL1Q9UK58 526 aaPredicted RBP9.98□□□□□ -0.81
CCDC39-201ENST00000442201 NHSQ6T4R5 1651 aa9.98□□□□□ -0.81
CCDC39-201ENST00000442201 H7C1W4 665 aa9.98□□□□□ -0.81
CCDC39-201ENST00000442201 SURF6O75683 361 aaKnown RBP9.98□□□□□ -0.81
CCDC39-201ENST00000442201 LINC00116Q8NCU8 138 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms