RNA–Protein interactions for RNA: ENST00000441439.6

LMO3-208, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO3, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-208ENST00000441439 GIGYF1O75420 1035 aaPredicted RBP9.37□□□□□ -0.91
LMO3-208ENST00000441439 ARID3AQ99856 593 aa9.37□□□□□ -0.91
LMO3-208ENST00000441439 H2AFXP16104 143 aaPredicted RBP9.36□□□□□ -0.91
LMO3-208ENST00000441439 MUM1L1Q5H9M0 696 aa9.36□□□□□ -0.91
LMO3-208ENST00000441439 MRFAP1L1Q96HT8 127 aa9.36□□□□□ -0.91
LMO3-208ENST00000441439 MTMR6Q9Y217 621 aa9.36□□□□□ -0.91
LMO3-208ENST00000441439 CICQ96RK0 1608 aaPredicted RBP9.36□□□□□ -0.91
LMO3-208ENST00000441439 METP08581 1390 aa9.36□□□□□ -0.91
LMO3-208ENST00000441439 RTF1Q92541 710 aaKnown RBP9.36□□□□□ -0.91
LMO3-208ENST00000441439 L2HGDHQ9H9P8 463 aa9.36□□□□□ -0.91
LMO3-208ENST00000441439 ATP8B1O43520 1251 aa9.36□□□□□ -0.91
LMO3-208ENST00000441439 TNNT1P13805 278 aa9.36□□□□□ -0.91
LMO3-208ENST00000441439 PTGS1P23219 599 aa9.36□□□□□ -0.91
LMO3-208ENST00000441439 DHX8Q14562 1220 aaKnown RBP9.35□□□□□ -0.91
LMO3-208ENST00000441439 MAP3K11Q16584 847 aa9.35□□□□□ -0.91
LMO3-208ENST00000441439 KMT5BQ4FZB7 885 aa9.35□□□□□ -0.91
LMO3-208ENST00000441439 MEIS3Q99687 375 aa9.35□□□□□ -0.91
LMO3-208ENST00000441439 UBXN6Q9BZV1 441 aa9.35□□□□□ -0.91
LMO3-208ENST00000441439 LRRCC1Q9C099 1032 aa9.35□□□□□ -0.91
LMO3-208ENST00000441439 DDX19AQ9NUU7 478 aaKnown RBP9.35□□□□□ -0.91
LMO3-208ENST00000441439 FAM177BA6PVY3 158 aa9.35□□□□□ -0.91
LMO3-208ENST00000441439 TYRO3Q06418 890 aa9.35□□□□□ -0.91
LMO3-208ENST00000441439 VPS53Q5VIR6 699 aa9.35□□□□□ -0.91
LMO3-208ENST00000441439 GDPD2Q9HCC8 539 aa9.35□□□□□ -0.91
LMO3-208ENST00000441439 GIMAP6Q6P9H5 292 aa9.35□□□□□ -0.91
LMO3-208ENST00000441439 LSG1Q9H089 658 aaKnown RBP9.35□□□□□ -0.91
LMO3-208ENST00000441439 SNX14Q9Y5W7 946 aa9.35□□□□□ -0.91
LMO3-208ENST00000441439 GLI3P10071 1580 aa9.34□□□□□ -0.91
LMO3-208ENST00000441439 SGSM2O43147 1006 aa9.34□□□□□ -0.91
LMO3-208ENST00000441439 ATP8B2P98198 1209 aa9.34□□□□□ -0.91
LMO3-208ENST00000441439 CEP135Q66GS9 1140 aa9.34□□□□□ -0.91
LMO3-208ENST00000441439 RUFY3Q7L099 469 aa9.34□□□□□ -0.91
LMO3-208ENST00000441439 SNRKQ9NRH2 765 aa9.34□□□□□ -0.91
LMO3-208ENST00000441439 MAP3K5Q99683 1374 aa9.34□□□□□ -0.91
LMO3-208ENST00000441439 SETD1BQ9UPS6 1966 aaKnown RBP9.34□□□□□ -0.91
LMO3-208ENST00000441439 CLSTN2Q9H4D0 955 aa9.34□□□□□ -0.91
LMO3-208ENST00000441439 OVOS2A0A0G2JMS6 1433 aa9.34□□□□□ -0.91
LMO3-208ENST00000441439 GNAI2P04899 355 aa9.34□□□□□ -0.91
LMO3-208ENST00000441439 CCDC93Q567U6 631 aa9.34□□□□□ -0.91
LMO3-208ENST00000441439 HYPKQ9NX55 129 aa9.34□□□□□ -0.91
LMO3-208ENST00000441439 WNK3Q9BYP7 1800 aa9.33□□□□□ -0.92
LMO3-208ENST00000441439 RAB11FIP3O75154 756 aa9.33□□□□□ -0.92
LMO3-208ENST00000441439 CCDC186Q7Z3E2 898 aa9.33□□□□□ -0.92
LMO3-208ENST00000441439 NUP62CLQ9H1M0 184 aa9.33□□□□□ -0.92
LMO3-208ENST00000441439 CBX8Q9HC52 389 aa9.33□□□□□ -0.92
LMO3-208ENST00000441439 AK2P54819 239 aa9.33□□□□□ -0.92
LMO3-208ENST00000441439 BMS1Q14692 1282 aaKnown RBP9.33□□□□□ -0.92
LMO3-208ENST00000441439 FOXD4L5Q5VV16 416 aaPredicted RBP9.33□□□□□ -0.92
LMO3-208ENST00000441439 FOXD4L4Q8WXT5 416 aaPredicted RBP9.33□□□□□ -0.92
LMO3-208ENST00000441439 YY1AP1Q9H869 796 aa9.33□□□□□ -0.92
LMO3-208ENST00000441439 NPHP3Q7Z494 1330 aa9.33□□□□□ -0.92
LMO3-208ENST00000441439 JCADQ9P266 1359 aa9.33□□□□□ -0.92
LMO3-208ENST00000441439 USP6P35125 1406 aa9.33□□□□□ -0.92
LMO3-208ENST00000441439 PLEKHG3A1L390 1219 aa9.32□□□□□ -0.92
LMO3-208ENST00000441439 CAPN2P17655 700 aa9.32□□□□□ -0.92
LMO3-208ENST00000441439 LRRC8AQ8IWT6 810 aa9.32□□□□□ -0.92
LMO3-208ENST00000441439 THUMPD2Q9BTF0 503 aaKnown RBP9.32□□□□□ -0.92
LMO3-208ENST00000441439 EFCC1Q9HA90 598 aa9.32□□□□□ -0.92
LMO3-208ENST00000441439 ANO2Q9NQ90 1003 aa9.32□□□□□ -0.92
LMO3-208ENST00000441439 SMC3Q9UQE7 1217 aa9.32□□□□□ -0.92
LMO3-208ENST00000441439 KDRP35968 1356 aa9.32□□□□□ -0.92
LMO3-208ENST00000441439 GNAI3P08754 354 aa9.32□□□□□ -0.92
LMO3-208ENST00000441439 SRPK2P78362 688 aaKnown RBP9.32□□□□□ -0.92
LMO3-208ENST00000441439 ZSWIM6Q9HCJ5 1215 aa9.32□□□□□ -0.92
LMO3-208ENST00000441439 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.32□□□□□ -0.92
LMO3-208ENST00000441439 SLU7O95391 586 aaKnown RBP9.32□□□□□ -0.92
LMO3-208ENST00000441439 CACTINQ8WUQ7 758 aaKnown RBP9.32□□□□□ -0.92
LMO3-208ENST00000441439 ZNF446Q9NWS9 450 aa9.32□□□□□ -0.92
LMO3-208ENST00000441439 UBR2Q8IWV8 1755 aa9.31□□□□□ -0.92
LMO3-208ENST00000441439 ZRANB2O95218 330 aaKnown RBP eCLIP9.31□□□□□ -0.92
LMO3-208ENST00000441439 FBXO38Q6PIJ6 1188 aa9.31□□□□□ -0.92
LMO3-208ENST00000441439 SCAND2PQ9GZW5 306 aaPredicted RBP9.31□□□□□ -0.92
LMO3-208ENST00000441439 SHANK3Q9BYB0 1731 aa9.31□□□□□ -0.92
LMO3-208ENST00000441439 KCNJ4P48050 445 aa9.31□□□□□ -0.92
LMO3-208ENST00000441439 KRT85P78386 507 aa9.31□□□□□ -0.92
LMO3-208ENST00000441439 IQCB1Q15051 598 aa9.31□□□□□ -0.92
LMO3-208ENST00000441439 PI4K2BQ8TCG2 481 aa9.31□□□□□ -0.92
LMO3-208ENST00000441439 IMPACTQ9P2X3 320 aa9.31□□□□□ -0.92
LMO3-208ENST00000441439 FHOD1Q9Y613 1164 aa9.31□□□□□ -0.92
LMO3-208ENST00000441439 CCZ1BP86790 482 aa9.31□□□□□ -0.92
LMO3-208ENST00000441439 CCZ1P86791 482 aaPredicted RBP9.31□□□□□ -0.92
LMO3-208ENST00000441439 ST3GAL1Q11201 340 aa9.31□□□□□ -0.92
LMO3-208ENST00000441439 POLA2Q14181 598 aa9.31□□□□□ -0.92
LMO3-208ENST00000441439 TTC6Q86TZ1 520 aa9.31□□□□□ -0.92
LMO3-208ENST00000441439 C16orf45Q96MC5 204 aaPredicted RBP9.31□□□□□ -0.92
LMO3-208ENST00000441439 OSBPL5Q9H0X9 879 aaPredicted RBP9.31□□□□□ -0.92
LMO3-208ENST00000441439 LAMB4A4D0S4 1761 aa9.31□□□□□ -0.92
LMO3-208ENST00000441439 SCN11AQ9UI33 1791 aa9.3□□□□□ -0.92
LMO3-208ENST00000441439 ROBO2Q9HCK4 1378 aa9.3□□□□□ -0.92
LMO3-208ENST00000441439 PSDA5PKW4 1024 aaPredicted RBP9.3□□□□□ -0.92
LMO3-208ENST00000441439 PDCP20941 246 aa9.3□□□□□ -0.92
LMO3-208ENST00000441439 DNM1Q05193 864 aaKnown RBP9.3□□□□□ -0.92
LMO3-208ENST00000441439 FAM69CQ0P6D2 419 aa9.3□□□□□ -0.92
LMO3-208ENST00000441439 KRT24Q2M2I5 525 aa9.3□□□□□ -0.92
LMO3-208ENST00000441439 IQUBQ8NA54 791 aa9.3□□□□□ -0.92
LMO3-208ENST00000441439 SSH3Q8TE77 659 aa9.3□□□□□ -0.92
LMO3-208ENST00000441439 GJB2P29033 226 aa9.3□□□□□ -0.92
LMO3-208ENST00000441439 TAF7LQ5H9L4 462 aa9.3□□□□□ -0.92
LMO3-208ENST00000441439 CDK19Q9BWU1 502 aa9.3□□□□□ -0.92
LMO3-208ENST00000441439 PSD3Q9NYI0 1048 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms