RNA–Protein interactions for RNA: ENST00000440705.6

VRK2-207, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK2, Length 1,676 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-207ENST00000440705 CWF19L2Q2TBE0 894 aaKnown RBP25.29■■□□□ 1.64
VRK2-207ENST00000440705 FAM196AQ6ZSG2 479 aa25.29■■□□□ 1.64
VRK2-207ENST00000440705 GCC1Q96CN9 775 aa25.29■■□□□ 1.64
VRK2-207ENST00000440705 MYD88Q99836 296 aa25.29■■□□□ 1.64
VRK2-207ENST00000440705 C9orf78Q9NZ63 289 aaPredicted RBP25.29■■□□□ 1.64
VRK2-207ENST00000440705 IGKV5-2P06315 115 aa25.29■■□□□ 1.64
VRK2-207ENST00000440705 BRWD3Q6RI45 1802 aa25.28■■□□□ 1.64
VRK2-207ENST00000440705 HMMRO75330 724 aa25.28■■□□□ 1.64
VRK2-207ENST00000440705 NEURL1BA8MQ27 555 aa25.27■■□□□ 1.64
VRK2-207ENST00000440705 IL6STP40189 918 aaPredicted RBP25.27■■□□□ 1.64
VRK2-207ENST00000440705 KIF6Q6ZMV9 814 aa25.27■■□□□ 1.64
VRK2-207ENST00000440705 PTF1AQ7RTS3 328 aa25.27■■□□□ 1.64
VRK2-207ENST00000440705 NPM2Q86SE8 214 aaKnown RBP25.27■■□□□ 1.64
VRK2-207ENST00000440705 CCDC87Q9NVE4 849 aa25.27■■□□□ 1.64
VRK2-207ENST00000440705 ZBTB1Q9Y2K1 713 aa25.27■■□□□ 1.64
VRK2-207ENST00000440705 ZNF330Q9Y3S2 320 aaPredicted RBP25.27■■□□□ 1.64
VRK2-207ENST00000440705 NBPF7P0C2Y1 421 aaPredicted RBP25.26■■□□□ 1.63
VRK2-207ENST00000440705 ITPK1Q13572 414 aa25.26■■□□□ 1.63
VRK2-207ENST00000440705 BCL11BQ9C0K0 894 aaPredicted RBP25.26■■□□□ 1.63
VRK2-207ENST00000440705 LRRFIP2Q9Y608 721 aaKnown RBP25.26■■□□□ 1.63
VRK2-207ENST00000440705 NUP188Q5SRE5 1749 aa25.26■■□□□ 1.63
VRK2-207ENST00000440705 GRM8O00222 908 aa25.26■■□□□ 1.63
VRK2-207ENST00000440705 RXRBP28702 533 aa25.26■■□□□ 1.63
VRK2-207ENST00000440705 UTYO14607 1347 aa25.26■■□□□ 1.63
VRK2-207ENST00000440705 CRKLP46109 303 aaKnown RBP25.25■■□□□ 1.63
VRK2-207ENST00000440705 GCKRQ14397 625 aa25.25■■□□□ 1.63
VRK2-207ENST00000440705 PDZRN3Q9UPQ7 1066 aa25.25■■□□□ 1.63
VRK2-207ENST00000440705 ATP8B2P98198 1209 aa25.24■■□□□ 1.63
VRK2-207ENST00000440705 INTS5Q6P9B9 1019 aaKnown RBP25.24■■□□□ 1.63
VRK2-207ENST00000440705 ZBTB3Q9H5J0 574 aa25.24■■□□□ 1.63
VRK2-207ENST00000440705 DCTPP1Q9H773 170 aa25.23■■□□□ 1.63
VRK2-207ENST00000440705 AFDNP55196 1824 aaKnown RBP25.22■■□□□ 1.63
VRK2-207ENST00000440705 RREB1Q92766 1687 aa25.22■■□□□ 1.63
VRK2-207ENST00000440705 MAP3K15Q6ZN16 1313 aa25.22■■□□□ 1.63
VRK2-207ENST00000440705 EIF5P55010 431 aaKnown RBP25.22■■□□□ 1.63
VRK2-207ENST00000440705 COL5A3P25940 1745 aaPredicted RBP25.22■■□□□ 1.63
VRK2-207ENST00000440705 ARXQ96QS3 562 aa25.21■■□□□ 1.63
VRK2-207ENST00000440705 ATP5J2-PTCD1G3V325 749 aa25.2■■□□□ 1.63
VRK2-207ENST00000440705 NUCB1Q02818 461 aa25.2■■□□□ 1.63
VRK2-207ENST00000440705 SKAP1Q86WV1 359 aa25.2■■□□□ 1.63
VRK2-207ENST00000440705 TCIRG1Q13488 830 aa25.2■■□□□ 1.62
VRK2-207ENST00000440705 ERVV-1B6SEH8 477 aa25.19■■□□□ 1.62
VRK2-207ENST00000440705 CCDC191Q8NCU4 936 aa25.19■■□□□ 1.62
VRK2-207ENST00000440705 CWC25Q9NXE8 425 aaPredicted RBP25.19■■□□□ 1.62
VRK2-207ENST00000440705 LY75O60449 1722 aa25.18■■□□□ 1.62
VRK2-207ENST00000440705 RGS3P49796 1198 aa25.18■■□□□ 1.62
VRK2-207ENST00000440705 HSP90AB3PQ58FF7 597 aa25.18■■□□□ 1.62
VRK2-207ENST00000440705 GIGYF2Q6Y7W6 1299 aaKnown RBP25.18■■□□□ 1.62
VRK2-207ENST00000440705 DZIP3Q86Y13 1208 aaKnown RBP25.18■■□□□ 1.62
VRK2-207ENST00000440705 LINC00116Q8NCU8 138 aa25.18■■□□□ 1.62
VRK2-207ENST00000440705 CCNL1Q9UK58 526 aaPredicted RBP25.18■■□□□ 1.62
VRK2-207ENST00000440705 MYH14Q7Z406 1995 aaKnown RBP25.18■■□□□ 1.62
VRK2-207ENST00000440705 CNTNAP4Q9C0A0 1308 aa25.18■■□□□ 1.62
VRK2-207ENST00000440705 TRIM28Q13263 835 aaKnown RBP25.17■■□□□ 1.62
VRK2-207ENST00000440705 RGS17Q9UGC6 210 aaPredicted RBP25.17■■□□□ 1.62
VRK2-207ENST00000440705 PNMA6EA0A0J9YXQ4 647 aa25.17■■□□□ 1.62
VRK2-207ENST00000440705 RC3H1Q5TC82 1133 aaKnown RBP25.17■■□□□ 1.62
VRK2-207ENST00000440705 ANKRD45Q5TZF3 282 aa25.17■■□□□ 1.62
VRK2-207ENST00000440705 CHD1LQ86WJ1 897 aa25.17■■□□□ 1.62
VRK2-207ENST00000440705 SSH3Q8TE77 659 aa25.17■■□□□ 1.62
VRK2-207ENST00000440705 ISCA1Q9BUE6 129 aa25.17■■□□□ 1.62
VRK2-207ENST00000440705 A0A087WZG4 1122 aa25.16■■□□□ 1.62
VRK2-207ENST00000440705 MTX1Q13505 466 aa25.16■■□□□ 1.62
VRK2-207ENST00000440705 PPP1R42Q7Z4L9 355 aa25.16■■□□□ 1.62
VRK2-207ENST00000440705 POLA2Q14181 598 aa25.14■■□□□ 1.62
VRK2-207ENST00000440705 SUCLG2Q96I99 432 aa25.14■■□□□ 1.62
VRK2-207ENST00000440705 ZBTB47Q9UFB7 747 aaPredicted RBP25.14■■□□□ 1.62
VRK2-207ENST00000440705 TBC1D2BQ9UPU7 963 aa25.14■■□□□ 1.62
VRK2-207ENST00000440705 COL15A1P39059 1388 aa25.14■■□□□ 1.62
VRK2-207ENST00000440705 H7C1W4 665 aa25.13■■□□□ 1.61
VRK2-207ENST00000440705 SRGAP3O43295 1099 aa25.13■■□□□ 1.61
VRK2-207ENST00000440705 TRIM37O94972 964 aa25.13■■□□□ 1.61
VRK2-207ENST00000440705 KCNQ4P56696 695 aa25.13■■□□□ 1.61
VRK2-207ENST00000440705 HLFQ16534 295 aa25.13■■□□□ 1.61
VRK2-207ENST00000440705 UBE3BQ7Z3V4 1068 aa25.13■■□□□ 1.61
VRK2-207ENST00000440705 POTEAQ6S8J7 498 aa25.12■■□□□ 1.61
VRK2-207ENST00000440705 KAZALD1Q96I82 304 aa25.12■■□□□ 1.61
VRK2-207ENST00000440705 LNPKQ9C0E8 428 aa25.12■■□□□ 1.61
VRK2-207ENST00000440705 BICC1Q9H694 974 aaKnown RBP25.11■■□□□ 1.61
VRK2-207ENST00000440705 NUP98P52948 1817 aa25.11■■□□□ 1.61
VRK2-207ENST00000440705 HMGB2P26583 209 aaKnown RBP25.1■■□□□ 1.61
VRK2-207ENST00000440705 CASP7P55210 303 aa25.1■■□□□ 1.61
VRK2-207ENST00000440705 TAF1LQ8IZX4 1826 aa25.1■■□□□ 1.61
VRK2-207ENST00000440705 ANKRD36CQ5JPF3 1778 aa25.09■■□□□ 1.61
VRK2-207ENST00000440705 RPS6KA4O75676 772 aa25.09■■□□□ 1.61
VRK2-207ENST00000440705 SLC27A3Q5K4L6 730 aa25.09■■□□□ 1.61
VRK2-207ENST00000440705 CAMTA2O94983 1202 aa25.07■■□□□ 1.6
VRK2-207ENST00000440705 PDE4AP27815 886 aa25.07■■□□□ 1.6
VRK2-207ENST00000440705 HSP90AB4PQ58FF6 505 aa25.07■■□□□ 1.6
VRK2-207ENST00000440705 EXOC6BQ9Y2D4 811 aa25.07■■□□□ 1.6
VRK2-207ENST00000440705 NLRP10Q86W26 655 aa25.07■■□□□ 1.6
VRK2-207ENST00000440705 JARID2Q92833 1246 aaPredicted RBP25.07■■□□□ 1.6
VRK2-207ENST00000440705 RGL2O15211 777 aa25.06■■□□□ 1.6
VRK2-207ENST00000440705 RAB11FIP3O75154 756 aa25.06■■□□□ 1.6
VRK2-207ENST00000440705 SURF6O75683 361 aaKnown RBP25.06■■□□□ 1.6
VRK2-207ENST00000440705 PCCAP05165 728 aaPredicted RBP25.06■■□□□ 1.6
VRK2-207ENST00000440705 RABL6Q3YEC7 729 aaPredicted RBP25.06■■□□□ 1.6
VRK2-207ENST00000440705 ZNF34Q8IZ26 560 aa25.06■■□□□ 1.6
VRK2-207ENST00000440705 ZBTB38Q8NAP3 1195 aaPredicted RBP25.06■■□□□ 1.6
VRK2-207ENST00000440705 ZNF652Q9Y2D9 606 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms