RNA–Protein interactions for RNA: ENST00000440293.5

HDAC7-213, Transcript of histone deacetylase 7, humanhuman

TSL 4

Gene HDAC7, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-213ENST00000440293 NPM2Q86SE8 214 aaKnown RBP23.67■■□□□ 1.38
HDAC7-213ENST00000440293 CARMIL3Q8ND23 1372 aa23.66■■□□□ 1.38
HDAC7-213ENST00000440293 TRIM35Q9UPQ4 493 aa23.66■■□□□ 1.38
HDAC7-213ENST00000440293 VIRMAQ69YN4 1812 aaKnown RBP23.66■■□□□ 1.38
HDAC7-213ENST00000440293 NFKBIEO00221 500 aa23.65■■□□□ 1.38
HDAC7-213ENST00000440293 PRELPP51888 382 aa23.65■■□□□ 1.38
HDAC7-213ENST00000440293 TBC1D9BQ66K14 1250 aa23.65■■□□□ 1.38
HDAC7-213ENST00000440293 LTBP3Q9NS15 1303 aa23.64■■□□□ 1.38
HDAC7-213ENST00000440293 SNRPA1P09661 255 aaKnown RBP23.64■■□□□ 1.37
HDAC7-213ENST00000440293 BICDL1Q6ZP65 573 aa23.64■■□□□ 1.37
HDAC7-213ENST00000440293 BABAM1Q9NWV8 329 aa23.64■■□□□ 1.37
HDAC7-213ENST00000440293 PRR5LQ6MZQ0 368 aa23.63■■□□□ 1.37
HDAC7-213ENST00000440293 SETDB2Q96T68 719 aa23.63■■□□□ 1.37
HDAC7-213ENST00000440293 RGL2O15211 777 aa23.62■■□□□ 1.37
HDAC7-213ENST00000440293 HTRA3P83110 453 aa23.62■■□□□ 1.37
HDAC7-213ENST00000440293 SOGA3Q5TF21 947 aa23.62■■□□□ 1.37
HDAC7-213ENST00000440293 CNKSR1Q969H4 720 aa23.62■■□□□ 1.37
HDAC7-213ENST00000440293 SIPA1L3O60292 1781 aaPredicted RBP23.62■■□□□ 1.37
HDAC7-213ENST00000440293 STYK1Q6J9G0 422 aa23.61■■□□□ 1.37
HDAC7-213ENST00000440293 CLEC4GQ6UXB4 293 aa23.61■■□□□ 1.37
HDAC7-213ENST00000440293 ZNF622Q969S3 477 aaKnown RBP eCLIP23.61■■□□□ 1.37
HDAC7-213ENST00000440293 TSPYL4Q9UJ04 414 aa23.61■■□□□ 1.37
HDAC7-213ENST00000440293 TBC1D2BQ9UPU7 963 aa23.61■■□□□ 1.37
HDAC7-213ENST00000440293 USP16Q9Y5T5 823 aa23.61■■□□□ 1.37
HDAC7-213ENST00000440293 DLG5Q8TDM6 1919 aa23.61■■□□□ 1.37
HDAC7-213ENST00000440293 EIF4A1P60842 406 aaKnown RBP23.6■■□□□ 1.37
HDAC7-213ENST00000440293 CAMTA2O94983 1202 aa23.59■■□□□ 1.37
HDAC7-213ENST00000440293 ST5P78524 1137 aa23.59■■□□□ 1.37
HDAC7-213ENST00000440293 FAM9BQ8IZU0 186 aa23.59■■□□□ 1.37
HDAC7-213ENST00000440293 CNBD1Q8NA66 436 aa23.59■■□□□ 1.37
HDAC7-213ENST00000440293 SCN7AQ01118 1682 aa23.58■■□□□ 1.37
HDAC7-213ENST00000440293 POTECB2RU33 542 aa23.58■■□□□ 1.37
HDAC7-213ENST00000440293 C21orf2O43822 256 aa23.58■■□□□ 1.37
HDAC7-213ENST00000440293 ERFEQ4G0M1 354 aa23.58■■□□□ 1.37
HDAC7-213ENST00000440293 PRAMEF22A3QJZ6 481 aa23.57■■□□□ 1.36
HDAC7-213ENST00000440293 CHL1O00533 1208 aa23.57■■□□□ 1.36
HDAC7-213ENST00000440293 A1BGP04217 495 aa23.57■■□□□ 1.36
HDAC7-213ENST00000440293 SRGNP10124 158 aa23.57■■□□□ 1.36
HDAC7-213ENST00000440293 CALD1Q05682 793 aaKnown RBP23.57■■□□□ 1.36
HDAC7-213ENST00000440293 MASTLQ96GX5 879 aa23.57■■□□□ 1.36
HDAC7-213ENST00000440293 TAOK3Q9H2K8 898 aa23.57■■□□□ 1.36
HDAC7-213ENST00000440293 LAS1LQ9Y4W2 734 aaKnown RBP23.57■■□□□ 1.36
HDAC7-213ENST00000440293 DIEXFQ68CQ4 756 aaKnown RBP23.56■■□□□ 1.36
HDAC7-213ENST00000440293 DZIP3Q86Y13 1208 aaKnown RBP23.56■■□□□ 1.36
HDAC7-213ENST00000440293 ZNF330Q9Y3S2 320 aaPredicted RBP23.56■■□□□ 1.36
HDAC7-213ENST00000440293 NPHP1O15259 732 aa23.55■■□□□ 1.36
HDAC7-213ENST00000440293 NCBP3Q53F19 620 aaKnown RBP23.55■■□□□ 1.36
HDAC7-213ENST00000440293 ZNF652Q9Y2D9 606 aa23.55■■□□□ 1.36
HDAC7-213ENST00000440293 CCER2I3L3R5 266 aa23.54■■□□□ 1.36
HDAC7-213ENST00000440293 COL13A1Q5TAT6 717 aaPredicted RBP23.54■■□□□ 1.36
HDAC7-213ENST00000440293 CFAP44Q96MT7 982 aa23.54■■□□□ 1.36
HDAC7-213ENST00000440293 TIAM2Q8IVF5 1701 aa23.53■■□□□ 1.36
HDAC7-213ENST00000440293 CCDC27Q2M243 656 aa23.53■■□□□ 1.36
HDAC7-213ENST00000440293 ANKRD31Q8N7Z5 1873 aa23.53■■□□□ 1.36
HDAC7-213ENST00000440293 KLRG2A4D1S0 409 aaPredicted RBP23.52■■□□□ 1.36
HDAC7-213ENST00000440293 PRPF40BQ6NWY9 871 aaKnown RBP23.52■■□□□ 1.36
HDAC7-213ENST00000440293 PCNTO95613 3336 aa23.52■■□□□ 1.36
HDAC7-213ENST00000440293 FER1L6Q2WGJ9 1857 aa23.51■■□□□ 1.35
HDAC7-213ENST00000440293 IQCA1LA6NCM1 817 aa23.5■■□□□ 1.35
HDAC7-213ENST00000440293 ZNF853P0CG23 659 aa23.5■■□□□ 1.35
HDAC7-213ENST00000440293 GNAI1P63096 354 aa23.5■■□□□ 1.35
HDAC7-213ENST00000440293 CHADLQ6NUI6 762 aa23.5■■□□□ 1.35
HDAC7-213ENST00000440293 TPTE2Q6XPS3 522 aa23.5■■□□□ 1.35
HDAC7-213ENST00000440293 NBPF5PQ86XG9 351 aaPredicted RBP23.5■■□□□ 1.35
HDAC7-213ENST00000440293 IFT57Q9NWB7 429 aa23.5■■□□□ 1.35
HDAC7-213ENST00000440293 DICER1Q9UPY3 1922 aaKnown RBP23.49■■□□□ 1.35
HDAC7-213ENST00000440293 NPR1P16066 1061 aa23.49■■□□□ 1.35
HDAC7-213ENST00000440293 WWC1Q8IX03 1113 aa23.49■■□□□ 1.35
HDAC7-213ENST00000440293 C7orf43Q8WVR3 580 aa23.49■■□□□ 1.35
HDAC7-213ENST00000440293 CREBZFQ9NS37 354 aa23.49■■□□□ 1.35
HDAC7-213ENST00000440293 CCDC88AQ3V6T2 1871 aa23.48■■□□□ 1.35
HDAC7-213ENST00000440293 CCDC24Q8N4L8 307 aa23.48■■□□□ 1.35
HDAC7-213ENST00000440293 L3MBTL3Q96JM7 780 aaPredicted RBP23.48■■□□□ 1.35
HDAC7-213ENST00000440293 NBPF26B4DH59 902 aa23.47■■□□□ 1.35
HDAC7-213ENST00000440293 PIP4K2AP48426 406 aaPredicted RBP23.47■■□□□ 1.35
HDAC7-213ENST00000440293 CCDC93Q567U6 631 aa23.47■■□□□ 1.35
HDAC7-213ENST00000440293 NBPF10Q6P3W6 841 aaKnown RBP23.47■■□□□ 1.35
HDAC7-213ENST00000440293 NGEFQ8N5V2 710 aa23.47■■□□□ 1.35
HDAC7-213ENST00000440293 NBPF15Q8N660 670 aa23.47■■□□□ 1.35
HDAC7-213ENST00000440293 ZNF219Q9P2Y4 722 aaPredicted RBP23.47■■□□□ 1.35
HDAC7-213ENST00000440293 COL11A2P13942 1736 aaPredicted RBP23.47■■□□□ 1.35
HDAC7-213ENST00000440293 BCORQ6W2J9 1755 aa23.46■■□□□ 1.35
HDAC7-213ENST00000440293 TNS4Q8IZW8 715 aa23.46■■□□□ 1.35
HDAC7-213ENST00000440293 MBIPQ9NS73 344 aa23.46■■□□□ 1.35
HDAC7-213ENST00000440293 SALL2Q9Y467 1007 aaPredicted RBP23.46■■□□□ 1.35
HDAC7-213ENST00000440293 KDM3BQ7LBC6 1761 aa23.45■■□□□ 1.34
HDAC7-213ENST00000440293 DDNO94850 711 aaPredicted RBP23.45■■□□□ 1.34
HDAC7-213ENST00000440293 HSPA1AP0DMV8 641 aaKnown RBP23.45■■□□□ 1.34
HDAC7-213ENST00000440293 HSPA1BP0DMV9 641 aaKnown RBP23.45■■□□□ 1.34
HDAC7-213ENST00000440293 EIF2S2P20042 333 aaKnown RBP23.45■■□□□ 1.34
HDAC7-213ENST00000440293 RTKN2Q8IZC4 609 aa23.45■■□□□ 1.34
HDAC7-213ENST00000440293 ALDH1B1P30837 517 aa23.44■■□□□ 1.34
HDAC7-213ENST00000440293 FKBP4Q02790 459 aaKnown RBP eCLIP23.44■■□□□ 1.34
HDAC7-213ENST00000440293 ARFGEF2Q9Y6D5 1785 aa23.44■■□□□ 1.34
HDAC7-213ENST00000440293 LDHDQ86WU2 507 aa23.43■■□□□ 1.34
HDAC7-213ENST00000440293 MIER1Q8N108 512 aa23.43■■□□□ 1.34
HDAC7-213ENST00000440293 SLX4Q8IY92 1834 aa23.43■■□□□ 1.34
HDAC7-213ENST00000440293 ERBB4Q15303 1308 aa23.42■■□□□ 1.34
HDAC7-213ENST00000440293 KRT24Q2M2I5 525 aa23.42■■□□□ 1.34
HDAC7-213ENST00000440293 WDR63Q8IWG1 891 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms