RNA–Protein interactions for RNA: ENST00000440088.5

APTR-204, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best) BASIC

Gene APTR, Length 2,029 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-204ENST00000440088 TTLL7Q6ZT98 887 aa24.52■■□□□ 1.52
APTR-204ENST00000440088 SMARCC1Q92922 1105 aaPredicted RBP24.52■■□□□ 1.52
APTR-204ENST00000440088 LNPKQ9C0E8 428 aa24.52■■□□□ 1.52
APTR-204ENST00000440088 QTRT2Q9H974 415 aaKnown RBP24.52■■□□□ 1.52
APTR-204ENST00000440088 RBM19Q9Y4C8 960 aaKnown RBP24.52■■□□□ 1.52
APTR-204ENST00000440088 PDE4AP27815 886 aa24.51■■□□□ 1.51
APTR-204ENST00000440088 UTYO14607 1347 aa24.51■■□□□ 1.51
APTR-204ENST00000440088 TJP1Q07157 1748 aa24.51■■□□□ 1.51
APTR-204ENST00000440088 PNMA6EA0A0J9YXQ4 647 aa24.5■■□□□ 1.51
APTR-204ENST00000440088 PALLDQ8WX93 1383 aa24.5■■□□□ 1.51
APTR-204ENST00000440088 GCKRQ14397 625 aa24.49■■□□□ 1.51
APTR-204ENST00000440088 NUP188Q5SRE5 1749 aa24.49■■□□□ 1.51
APTR-204ENST00000440088 LOC102724428A0A0B4J2F2 783 aa24.49■■□□□ 1.51
APTR-204ENST00000440088 SIK1P57059 783 aa24.49■■□□□ 1.51
APTR-204ENST00000440088 BACH2Q9BYV9 841 aa24.49■■□□□ 1.51
APTR-204ENST00000440088 ZBTB47Q9UFB7 747 aaPredicted RBP24.49■■□□□ 1.51
APTR-204ENST00000440088 ZNF330Q9Y3S2 320 aaPredicted RBP24.49■■□□□ 1.51
APTR-204ENST00000440088 ATP6V1AP38606 617 aa24.47■■□□□ 1.51
APTR-204ENST00000440088 AFDNP55196 1824 aaKnown RBP24.47■■□□□ 1.51
APTR-204ENST00000440088 FAM161AQ3B820 660 aa24.47■■□□□ 1.51
APTR-204ENST00000440088 SEPT12Q8IYM1 358 aa24.47■■□□□ 1.51
APTR-204ENST00000440088 SSH3Q8TE77 659 aa24.47■■□□□ 1.51
APTR-204ENST00000440088 PPP1R42Q7Z4L9 355 aa24.46■■□□□ 1.51
APTR-204ENST00000440088 ZBTB3Q9H5J0 574 aa24.46■■□□□ 1.51
APTR-204ENST00000440088 CICQ96RK0 1608 aaPredicted RBP24.46■■□□□ 1.51
APTR-204ENST00000440088 KIF6Q6ZMV9 814 aa24.45■■□□□ 1.51
APTR-204ENST00000440088 ZBTB1Q9Y2K1 713 aa24.45■■□□□ 1.51
APTR-204ENST00000440088 ATP5J2-PTCD1G3V325 749 aa24.45■■□□□ 1.5
APTR-204ENST00000440088 SRGAP3O43295 1099 aa24.44■■□□□ 1.5
APTR-204ENST00000440088 MTX1Q13505 466 aa24.44■■□□□ 1.5
APTR-204ENST00000440088 POLA2Q14181 598 aa24.44■■□□□ 1.5
APTR-204ENST00000440088 IL6STP40189 918 aaPredicted RBP24.43■■□□□ 1.5
APTR-204ENST00000440088 NPM2Q86SE8 214 aaKnown RBP24.43■■□□□ 1.5
APTR-204ENST00000440088 NHSQ6T4R5 1651 aa24.43■■□□□ 1.5
APTR-204ENST00000440088 FAM182BQ5T319 152 aa24.42■■□□□ 1.5
APTR-204ENST00000440088 SUCLG2Q96I99 432 aa24.42■■□□□ 1.5
APTR-204ENST00000440088 EXOC6BQ9Y2D4 811 aa24.42■■□□□ 1.5
APTR-204ENST00000440088 C8orf34Q49A92 452 aa24.42■■□□□ 1.5
APTR-204ENST00000440088 ZNF831Q5JPB2 1677 aa24.41■■□□□ 1.5
APTR-204ENST00000440088 APBB1O00213 710 aa24.41■■□□□ 1.5
APTR-204ENST00000440088 CCDC87Q9NVE4 849 aa24.41■■□□□ 1.5
APTR-204ENST00000440088 A0A087WZG4 1122 aa24.4■■□□□ 1.5
APTR-204ENST00000440088 ITPK1Q13572 414 aa24.4■■□□□ 1.5
APTR-204ENST00000440088 MAP3K15Q6ZN16 1313 aa24.4■■□□□ 1.5
APTR-204ENST00000440088 CCDC191Q8NCU4 936 aa24.4■■□□□ 1.5
APTR-204ENST00000440088 ARXQ96QS3 562 aa24.4■■□□□ 1.5
APTR-204ENST00000440088 CWC25Q9NXE8 425 aaPredicted RBP24.4■■□□□ 1.5
APTR-204ENST00000440088 CRKLP46109 303 aaKnown RBP24.4■■□□□ 1.5
APTR-204ENST00000440088 KAZALD1Q96I82 304 aa24.4■■□□□ 1.5
APTR-204ENST00000440088 BICC1Q9H694 974 aaKnown RBP24.4■■□□□ 1.5
APTR-204ENST00000440088 BTAF1O14981 1849 aa24.4■■□□□ 1.5
APTR-204ENST00000440088 TCIRG1Q13488 830 aa24.39■■□□□ 1.49
APTR-204ENST00000440088 ZNF772Q68DY9 489 aaPredicted RBP24.39■■□□□ 1.49
APTR-204ENST00000440088 INTS5Q6P9B9 1019 aaKnown RBP24.39■■□□□ 1.49
APTR-204ENST00000440088 UBE3BQ7Z3V4 1068 aa24.39■■□□□ 1.49
APTR-204ENST00000440088 LRRCC1Q9C099 1032 aa24.39■■□□□ 1.49
APTR-204ENST00000440088 COL15A1P39059 1388 aa24.38■■□□□ 1.49
APTR-204ENST00000440088 PTF1AQ7RTS3 328 aa24.38■■□□□ 1.49
APTR-204ENST00000440088 GIGYF2Q6Y7W6 1299 aaKnown RBP24.37■■□□□ 1.49
APTR-204ENST00000440088 RREB1Q92766 1687 aa24.37■■□□□ 1.49
APTR-204ENST00000440088 SBF2Q86WG5 1849 aa24.37■■□□□ 1.49
APTR-204ENST00000440088 SMARCA5O60264 1052 aaPredicted RBP24.37■■□□□ 1.49
APTR-204ENST00000440088 SURF6O75683 361 aaKnown RBP24.37■■□□□ 1.49
APTR-204ENST00000440088 EIF5P55010 431 aaKnown RBP24.37■■□□□ 1.49
APTR-204ENST00000440088 ISCA1Q9BUE6 129 aa24.37■■□□□ 1.49
APTR-204ENST00000440088 RAB11FIP3O75154 756 aa24.36■■□□□ 1.49
APTR-204ENST00000440088 TRIM28Q13263 835 aaKnown RBP24.36■■□□□ 1.49
APTR-204ENST00000440088 COL5A3P25940 1745 aaPredicted RBP24.36■■□□□ 1.49
APTR-204ENST00000440088 H7C1W4 665 aa24.35■■□□□ 1.49
APTR-204ENST00000440088 HSP90AB4PQ58FF6 505 aa24.35■■□□□ 1.49
APTR-204ENST00000440088 HSP90AB3PQ58FF7 597 aa24.35■■□□□ 1.49
APTR-204ENST00000440088 DZIP3Q86Y13 1208 aaKnown RBP24.35■■□□□ 1.49
APTR-204ENST00000440088 ERVV-1B6SEH8 477 aa24.35■■□□□ 1.49
APTR-204ENST00000440088 CASP7P55210 303 aa24.35■■□□□ 1.49
APTR-204ENST00000440088 PLEKHM2Q8IWE5 1019 aa24.35■■□□□ 1.49
APTR-204ENST00000440088 BCL11AQ9H165 835 aa24.35■■□□□ 1.49
APTR-204ENST00000440088 MYH14Q7Z406 1995 aaKnown RBP24.35■■□□□ 1.49
APTR-204ENST00000440088 C16orf71Q8IYS4 520 aaPredicted RBP24.34■■□□□ 1.49
APTR-204ENST00000440088 JARID2Q92833 1246 aaPredicted RBP24.34■■□□□ 1.49
APTR-204ENST00000440088 NOP58Q9Y2X3 529 aaKnown RBP24.33■■□□□ 1.49
APTR-204ENST00000440088 RBM6P78332 1123 aaKnown RBP24.32■■□□□ 1.48
APTR-204ENST00000440088 HLFQ16534 295 aa24.32■■□□□ 1.48
APTR-204ENST00000440088 BMP2KLQ5H9B9 411 aa24.32■■□□□ 1.48
APTR-204ENST00000440088 KRT27Q7Z3Y8 459 aa24.32■■□□□ 1.48
APTR-204ENST00000440088 TBC1D2BQ9UPU7 963 aa24.32■■□□□ 1.48
APTR-204ENST00000440088 RABL6Q3YEC7 729 aaPredicted RBP24.32■■□□□ 1.48
APTR-204ENST00000440088 EPHA10Q5JZY3 1008 aa24.32■■□□□ 1.48
APTR-204ENST00000440088 LINC00116Q8NCU8 138 aa24.31■■□□□ 1.48
APTR-204ENST00000440088 KIF1BPQ96EK5 621 aa24.31■■□□□ 1.48
APTR-204ENST00000440088 FAM196AQ6ZSG2 479 aa24.3■■□□□ 1.48
APTR-204ENST00000440088 BCL11BQ9C0K0 894 aaPredicted RBP24.3■■□□□ 1.48
APTR-204ENST00000440088 NUP98P52948 1817 aa24.3■■□□□ 1.48
APTR-204ENST00000440088 BRWD3Q6RI45 1802 aa24.3■■□□□ 1.48
APTR-204ENST00000440088 ANKRD36CQ5JPF3 1778 aa24.3■■□□□ 1.48
APTR-204ENST00000440088 RHPN1Q8TCX5 695 aa24.3■■□□□ 1.48
APTR-204ENST00000440088 OTUD7AQ8TE49 926 aaPredicted RBP24.3■■□□□ 1.48
APTR-204ENST00000440088 OS9Q13438 667 aaPredicted RBP24.29■■□□□ 1.48
APTR-204ENST00000440088 CNTNAP4Q9C0A0 1308 aa24.29■■□□□ 1.48
APTR-204ENST00000440088 RTL5Q5HYW3 569 aaPredicted RBP24.28■■□□□ 1.48
APTR-204ENST00000440088 ERC1Q8IUD2 1116 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms