RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 USP35Q9P2H5 1018 aa14.49□□□□□ -0.09
SMAD3-202ENST00000439724 NBPF26B4DH59 902 aa14.48□□□□□ -0.09
SMAD3-202ENST00000439724 NBPF14Q5TI25 921 aa14.48□□□□□ -0.09
SMAD3-202ENST00000439724 NBPF10Q6P3W6 841 aaKnown RBP14.48□□□□□ -0.09
SMAD3-202ENST00000439724 NBPF15Q8N660 670 aa14.48□□□□□ -0.09
SMAD3-202ENST00000439724 USP42Q9H9J4 1324 aaKnown RBP14.47□□□□□ -0.09
SMAD3-202ENST00000439724 NWD2Q9ULI1 1742 aa14.47□□□□□ -0.09
SMAD3-202ENST00000439724 ERC1Q8IUD2 1116 aa14.47□□□□□ -0.09
SMAD3-202ENST00000439724 SNX21Q969T3 373 aa14.47□□□□□ -0.09
SMAD3-202ENST00000439724 KIF2CQ99661 725 aa14.47□□□□□ -0.09
SMAD3-202ENST00000439724 BICC1Q9H694 974 aaKnown RBP14.47□□□□□ -0.09
SMAD3-202ENST00000439724 IL1RAPL2Q9NP60 686 aa14.47□□□□□ -0.09
SMAD3-202ENST00000439724 PIP4K2AP48426 406 aaPredicted RBP14.46□□□□□ -0.09
SMAD3-202ENST00000439724 VSIG10Q8N0Z9 540 aa14.46□□□□□ -0.09
SMAD3-202ENST00000439724 AK9Q5TCS8 1911 aa14.46□□□□□ -0.09
SMAD3-202ENST00000439724 NBR1Q14596 966 aa14.46□□□□□ -0.1
SMAD3-202ENST00000439724 CDCA7Q9BWT1 371 aaPredicted RBP14.46□□□□□ -0.1
SMAD3-202ENST00000439724 TJP1Q07157 1748 aa14.45□□□□□ -0.1
SMAD3-202ENST00000439724 PTCD1O75127 700 aaKnown RBP14.45□□□□□ -0.1
SMAD3-202ENST00000439724 REC8O95072 547 aa14.45□□□□□ -0.1
SMAD3-202ENST00000439724 OS9Q13438 667 aaPredicted RBP14.45□□□□□ -0.1
SMAD3-202ENST00000439724 TSHZ3Q63HK5 1081 aa14.45□□□□□ -0.1
SMAD3-202ENST00000439724 HSCBQ8IWL3 235 aa14.45□□□□□ -0.1
SMAD3-202ENST00000439724 TEX13AQ9BXU3 409 aaPredicted RBP14.45□□□□□ -0.1
SMAD3-202ENST00000439724 USP26Q9BXU7 913 aa14.45□□□□□ -0.1
SMAD3-202ENST00000439724 BCL9O00512 1426 aa14.45□□□□□ -0.1
SMAD3-202ENST00000439724 TTC41PQ6P2S7 1318 aa14.44□□□□□ -0.1
SMAD3-202ENST00000439724 ERC2O15083 957 aa14.44□□□□□ -0.1
SMAD3-202ENST00000439724 NUTM1Q86Y26 1132 aa14.44□□□□□ -0.1
SMAD3-202ENST00000439724 PI4K2BQ8TCG2 481 aa14.44□□□□□ -0.1
SMAD3-202ENST00000439724 PIGBQ92521 554 aa14.44□□□□□ -0.1
SMAD3-202ENST00000439724 THRAP3Q9Y2W1 955 aaKnown RBP14.44□□□□□ -0.1
SMAD3-202ENST00000439724 DOT1LQ8TEK3 1739 aa14.44□□□□□ -0.1
SMAD3-202ENST00000439724 SPATA31A1Q5TZJ5 1347 aa14.43□□□□□ -0.1
SMAD3-202ENST00000439724 EXOC5O00471 708 aa14.43□□□□□ -0.1
SMAD3-202ENST00000439724 TOM1O60784 492 aa14.43□□□□□ -0.1
SMAD3-202ENST00000439724 A1BGP04217 495 aa14.43□□□□□ -0.1
SMAD3-202ENST00000439724 RABL6Q3YEC7 729 aaPredicted RBP14.43□□□□□ -0.1
SMAD3-202ENST00000439724 CLASRPQ8N2M8 674 aaKnown RBP14.43□□□□□ -0.1
SMAD3-202ENST00000439724 ANTXR1Q9H6X2 564 aa14.43□□□□□ -0.1
SMAD3-202ENST00000439724 ATG3Q9NT62 314 aa14.43□□□□□ -0.1
SMAD3-202ENST00000439724 CASP7P55210 303 aa14.42□□□□□ -0.1
SMAD3-202ENST00000439724 RTL5Q5HYW3 569 aaPredicted RBP14.42□□□□□ -0.1
SMAD3-202ENST00000439724 TTLL7Q6ZT98 887 aa14.42□□□□□ -0.1
SMAD3-202ENST00000439724 ASAP1Q9ULH1 1129 aa14.42□□□□□ -0.1
SMAD3-202ENST00000439724 PA2G4Q9UQ80 394 aaKnown RBP14.42□□□□□ -0.1
SMAD3-202ENST00000439724 SLIT2O94813 1529 aa14.42□□□□□ -0.1
SMAD3-202ENST00000439724 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.42□□□□□ -0.1
SMAD3-202ENST00000439724 TRIM6-TRIM34B2RNG4 842 aa14.41□□□□□ -0.1
SMAD3-202ENST00000439724 CHMLP26374 656 aa14.41□□□□□ -0.1
SMAD3-202ENST00000439724 EPHA10Q5JZY3 1008 aa14.41□□□□□ -0.1
SMAD3-202ENST00000439724 ESYT1Q9BSJ8 1104 aa14.41□□□□□ -0.1
SMAD3-202ENST00000439724 A0A087WZG4 1122 aa14.41□□□□□ -0.1
SMAD3-202ENST00000439724 ATP5J2-PTCD1G3V325 749 aa14.41□□□□□ -0.1
SMAD3-202ENST00000439724 H7C1W4 665 aa14.41□□□□□ -0.1
SMAD3-202ENST00000439724 ADAMTS2O95450 1211 aa14.41□□□□□ -0.1
SMAD3-202ENST00000439724 G3BP1Q13283 466 aaKnown RBP eCLIP14.41□□□□□ -0.1
SMAD3-202ENST00000439724 RABEP1Q15276 862 aa14.41□□□□□ -0.1
SMAD3-202ENST00000439724 UBE3BQ7Z3V4 1068 aa14.41□□□□□ -0.1
SMAD3-202ENST00000439724 COPRSQ9NQ92 184 aa14.41□□□□□ -0.1
SMAD3-202ENST00000439724 EPB41L2O43491 1005 aaKnown RBP14.4□□□□□ -0.1
SMAD3-202ENST00000439724 GLRX3O76003 335 aaKnown RBP14.4□□□□□ -0.1
SMAD3-202ENST00000439724 SASH1O94885 1247 aa14.4□□□□□ -0.1
SMAD3-202ENST00000439724 RFX5P48382 616 aaPredicted RBP14.4□□□□□ -0.1
SMAD3-202ENST00000439724 UNC5CLQ8IV45 518 aa14.4□□□□□ -0.1
SMAD3-202ENST00000439724 DNAJC10Q8IXB1 793 aa14.4□□□□□ -0.1
SMAD3-202ENST00000439724 CCDC191Q8NCU4 936 aa14.4□□□□□ -0.1
SMAD3-202ENST00000439724 RILPL2Q969X0 211 aa14.4□□□□□ -0.1
SMAD3-202ENST00000439724 GPATCH3Q96I76 525 aa14.4□□□□□ -0.1
SMAD3-202ENST00000439724 CWC25Q9NXE8 425 aaPredicted RBP14.4□□□□□ -0.1
SMAD3-202ENST00000439724 STARD3NLO95772 234 aa14.39□□□□□ -0.11
SMAD3-202ENST00000439724 NFKBIBQ15653 356 aa14.39□□□□□ -0.11
SMAD3-202ENST00000439724 SLKQ9H2G2 1235 aaPredicted RBP14.39□□□□□ -0.11
SMAD3-202ENST00000439724 ECHDC1Q9NTX5 307 aa14.39□□□□□ -0.11
SMAD3-202ENST00000439724 SPATA31A5Q5VU36 1347 aa14.38□□□□□ -0.11
SMAD3-202ENST00000439724 SPATA31A7Q8IWB4 1347 aa14.38□□□□□ -0.11
SMAD3-202ENST00000439724 IFIT2P09913 472 aaKnown RBP14.38□□□□□ -0.11
SMAD3-202ENST00000439724 CNTROBQ8N137 903 aa14.38□□□□□ -0.11
SMAD3-202ENST00000439724 ISCA1Q9BUE6 129 aa14.38□□□□□ -0.11
SMAD3-202ENST00000439724 CICQ96RK0 1608 aaPredicted RBP14.38□□□□□ -0.11
SMAD3-202ENST00000439724 BARGINQ6ZT62 677 aa14.37□□□□□ -0.11
SMAD3-202ENST00000439724 AACSQ86V21 672 aa14.37□□□□□ -0.11
SMAD3-202ENST00000439724 ZBTB3Q9H5J0 574 aa14.37□□□□□ -0.11
SMAD3-202ENST00000439724 ANKRD36CQ5JPF3 1778 aa14.37□□□□□ -0.11
SMAD3-202ENST00000439724 K7ELQ4 463 aaPredicted RBP14.36□□□□□ -0.11
SMAD3-202ENST00000439724 PIP4K2BP78356 416 aa14.36□□□□□ -0.11
SMAD3-202ENST00000439724 FOXO4P98177 505 aa14.36□□□□□ -0.11
SMAD3-202ENST00000439724 PTPN12Q05209 780 aaKnown RBP14.36□□□□□ -0.11
SMAD3-202ENST00000439724 DDB1Q16531 1140 aa14.36□□□□□ -0.11
SMAD3-202ENST00000439724 EAF2Q96CJ1 260 aaPredicted RBP14.36□□□□□ -0.11
SMAD3-202ENST00000439724 RBM42Q9BTD8 480 aaKnown RBP14.36□□□□□ -0.11
SMAD3-202ENST00000439724 TRIM28Q13263 835 aaKnown RBP14.36□□□□□ -0.11
SMAD3-202ENST00000439724 TCIRG1Q13488 830 aa14.36□□□□□ -0.11
SMAD3-202ENST00000439724 KIF6Q6ZMV9 814 aa14.36□□□□□ -0.11
SMAD3-202ENST00000439724 JARID2Q92833 1246 aaPredicted RBP14.36□□□□□ -0.11
SMAD3-202ENST00000439724 IL17RAQ96F46 866 aa14.36□□□□□ -0.11
SMAD3-202ENST00000439724 SLC4A9Q96Q91 983 aa14.36□□□□□ -0.11
SMAD3-202ENST00000439724 NUTM2BA6NNL0 878 aaPredicted RBP14.35□□□□□ -0.11
SMAD3-202ENST00000439724 NUTM2EB1AL46 878 aaPredicted RBP14.35□□□□□ -0.11
SMAD3-202ENST00000439724 CD2BP2O95400 341 aaKnown RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 128.2 ms