RNA–Protein interactions for RNA: ENST00000439122.6

HDAC8-214, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 2,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-214ENST00000439122 ALS2Q96Q42 1657 aa14.7□□□□□ -0.06
HDAC8-214ENST00000439122 USP42Q9H9J4 1324 aaKnown RBP14.7□□□□□ -0.06
HDAC8-214ENST00000439122 TMEM94Q12767 1356 aa14.7□□□□□ -0.06
HDAC8-214ENST00000439122 MST1RQ04912 1400 aa14.7□□□□□ -0.06
HDAC8-214ENST00000439122 PRPF40AO75400 957 aaKnown RBP14.7□□□□□ -0.06
HDAC8-214ENST00000439122 CUL4AQ13619 759 aa14.7□□□□□ -0.06
HDAC8-214ENST00000439122 IL17RAQ96F46 866 aa14.7□□□□□ -0.06
HDAC8-214ENST00000439122 GPATCH3Q96I76 525 aa14.7□□□□□ -0.06
HDAC8-214ENST00000439122 SUCLG2Q96I99 432 aa14.7□□□□□ -0.06
HDAC8-214ENST00000439122 BICC1Q9H694 974 aaKnown RBP14.7□□□□□ -0.06
HDAC8-214ENST00000439122 RAD50Q92878 1312 aa14.7□□□□□ -0.06
HDAC8-214ENST00000439122 CHRNA2Q15822 529 aa14.69□□□□□ -0.06
HDAC8-214ENST00000439122 ECHDC1Q9NTX5 307 aa14.69□□□□□ -0.06
HDAC8-214ENST00000439122 KDM6AO15550 1401 aaPredicted RBP14.69□□□□□ -0.06
HDAC8-214ENST00000439122 CAVIN1Q6NZI2 390 aaKnown RBP14.69□□□□□ -0.06
HDAC8-214ENST00000439122 AACSQ86V21 672 aa14.69□□□□□ -0.06
HDAC8-214ENST00000439122 IFNL2Q8IZJ0 200 aa14.69□□□□□ -0.06
HDAC8-214ENST00000439122 DIAPH3Q9NSV4 1193 aa14.69□□□□□ -0.06
HDAC8-214ENST00000439122 ADAMTS7Q9UKP4 1686 aa14.69□□□□□ -0.06
HDAC8-214ENST00000439122 LMTK3Q96Q04 1460 aa14.68□□□□□ -0.06
HDAC8-214ENST00000439122 NEXNQ0ZGT2 675 aa14.68□□□□□ -0.06
HDAC8-214ENST00000439122 LARP1Q6PKG0 1096 aaKnown RBP14.68□□□□□ -0.06
HDAC8-214ENST00000439122 INTS4Q96HW7 963 aaKnown RBP14.68□□□□□ -0.06
HDAC8-214ENST00000439122 KAZALD1Q96I82 304 aa14.68□□□□□ -0.06
HDAC8-214ENST00000439122 CHAMP1Q96JM3 812 aa14.68□□□□□ -0.06
HDAC8-214ENST00000439122 LSG1Q9H089 658 aaKnown RBP14.68□□□□□ -0.06
HDAC8-214ENST00000439122 MEGF6O75095 1541 aa14.68□□□□□ -0.06
HDAC8-214ENST00000439122 IGKV5-2P06315 115 aa14.67□□□□□ -0.06
HDAC8-214ENST00000439122 G3BP1Q13283 466 aaKnown RBP eCLIP14.67□□□□□ -0.06
HDAC8-214ENST00000439122 XAGE3Q8WTP9 111 aa14.67□□□□□ -0.06
HDAC8-214ENST00000439122 ZNF496Q96IT1 587 aaPredicted RBP14.67□□□□□ -0.06
HDAC8-214ENST00000439122 UTYO14607 1347 aa14.67□□□□□ -0.06
HDAC8-214ENST00000439122 COPS6Q7L5N1 327 aa14.67□□□□□ -0.06
HDAC8-214ENST00000439122 TTC5Q8N0Z6 440 aa14.67□□□□□ -0.06
HDAC8-214ENST00000439122 SNX14Q9Y5W7 946 aa14.67□□□□□ -0.06
HDAC8-214ENST00000439122 SCN11AQ9UI33 1791 aa14.67□□□□□ -0.06
HDAC8-214ENST00000439122 RUFY2Q8WXA3 655 aa14.66□□□□□ -0.06
HDAC8-214ENST00000439122 SIL1Q9H173 461 aa14.66□□□□□ -0.06
HDAC8-214ENST00000439122 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.66□□□□□ -0.061e-6■■□□□ 14.2
HDAC8-214ENST00000439122 RRAGDQ9NQL2 400 aaPredicted RBP14.66□□□□□ -0.06
HDAC8-214ENST00000439122 NEURL1BA8MQ27 555 aa14.65□□□□□ -0.06
HDAC8-214ENST00000439122 SASH1O94885 1247 aa14.65□□□□□ -0.06
HDAC8-214ENST00000439122 BRD1O95696 1058 aa14.65□□□□□ -0.06
HDAC8-214ENST00000439122 PIP4K2AP48426 406 aaPredicted RBP14.65□□□□□ -0.06
HDAC8-214ENST00000439122 RASEFQ8IZ41 740 aa14.65□□□□□ -0.06
HDAC8-214ENST00000439122 MYD88Q99836 296 aa14.65□□□□□ -0.06
HDAC8-214ENST00000439122 C5P01031 1676 aa14.65□□□□□ -0.06
HDAC8-214ENST00000439122 ZSCAN23Q3MJ62 389 aa14.65□□□□□ -0.06
HDAC8-214ENST00000439122 CADPS2Q86UW7 1296 aa14.65□□□□□ -0.06
HDAC8-214ENST00000439122 EVI5LQ96CN4 794 aa14.65□□□□□ -0.06
HDAC8-214ENST00000439122 DCAF5Q96JK2 942 aa14.65□□□□□ -0.06
HDAC8-214ENST00000439122 CCDC8Q9H0W5 538 aaPredicted RBP14.65□□□□□ -0.06
HDAC8-214ENST00000439122 USP16Q9Y5T5 823 aa14.65□□□□□ -0.06
HDAC8-214ENST00000439122 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.65□□□□□ -0.06
HDAC8-214ENST00000439122 CYP27B1O15528 508 aa14.64□□□□□ -0.07
HDAC8-214ENST00000439122 SNRPA1P09661 255 aaKnown RBP14.64□□□□□ -0.07
HDAC8-214ENST00000439122 GCKRQ14397 625 aa14.64□□□□□ -0.07
HDAC8-214ENST00000439122 KLHDC4Q8TBB5 520 aa14.64□□□□□ -0.07
HDAC8-214ENST00000439122 GPT2Q8TD30 523 aa14.64□□□□□ -0.07
HDAC8-214ENST00000439122 EAF2Q96CJ1 260 aaPredicted RBP14.64□□□□□ -0.07
HDAC8-214ENST00000439122 METTL22Q9BUU2 404 aaPredicted RBP14.64□□□□□ -0.07
HDAC8-214ENST00000439122 ANKRD13DQ6ZTN6 518 aa14.64□□□□□ -0.07
HDAC8-214ENST00000439122 CRYBG1Q9Y4K1 1723 aa14.64□□□□□ -0.07
HDAC8-214ENST00000439122 DCCP43146 1447 aa14.63□□□□□ -0.07
HDAC8-214ENST00000439122 TNS3Q68CZ2 1445 aa14.63□□□□□ -0.07
HDAC8-214ENST00000439122 NASPP49321 788 aaPredicted RBP14.63□□□□□ -0.07
HDAC8-214ENST00000439122 CASTP20810 708 aaKnown RBP14.63□□□□□ -0.07
HDAC8-214ENST00000439122 AK2P54819 239 aa14.63□□□□□ -0.07
HDAC8-214ENST00000439122 ZNF445P59923 1031 aa14.63□□□□□ -0.07
HDAC8-214ENST00000439122 PTH1RQ03431 593 aa14.63□□□□□ -0.07
HDAC8-214ENST00000439122 FMNL2Q96PY5 1086 aa14.63□□□□□ -0.07
HDAC8-214ENST00000439122 LARP6Q9BRS8 491 aaKnown RBP14.63□□□□□ -0.07
HDAC8-214ENST00000439122 COL18A1P39060 1754 aa14.62□□□□□ -0.07
HDAC8-214ENST00000439122 CABP4P57796 275 aa14.62□□□□□ -0.07
HDAC8-214ENST00000439122 FOXD4L6Q3SYB3 417 aaPredicted RBP14.62□□□□□ -0.07
HDAC8-214ENST00000439122 FOXD4L3Q6VB84 417 aaPredicted RBP14.62□□□□□ -0.07
HDAC8-214ENST00000439122 JARID2Q92833 1246 aaPredicted RBP14.62□□□□□ -0.07
HDAC8-214ENST00000439122 TTC14Q96N46 770 aa14.62□□□□□ -0.07
HDAC8-214ENST00000439122 TLR7Q9NYK1 1049 aaKnown RBP14.62□□□□□ -0.07
HDAC8-214ENST00000439122 RBM27Q9P2N5 1060 aaKnown RBP14.62□□□□□ -0.07
HDAC8-214ENST00000439122 EPHA10Q5JZY3 1008 aa14.61□□□□□ -0.07
HDAC8-214ENST00000439122 PRPF40BQ6NWY9 871 aaKnown RBP14.61□□□□□ -0.07
HDAC8-214ENST00000439122 TRIM44Q96DX7 344 aaPredicted RBP14.61□□□□□ -0.07
HDAC8-214ENST00000439122 STRCP1A6NGW2 1772 aa14.61□□□□□ -0.07
HDAC8-214ENST00000439122 CPA1P15085 419 aa14.61□□□□□ -0.07
HDAC8-214ENST00000439122 BOLA2Q9H3K6 86 aa14.61□□□□□ -0.07
HDAC8-214ENST00000439122 LIMCH1Q9UPQ0 1083 aa14.61□□□□□ -0.07
HDAC8-214ENST00000439122 SPATA31A3Q5VYP0 1347 aa14.61□□□□□ -0.07
HDAC8-214ENST00000439122 RUFY3Q7L099 469 aa14.6□□□□□ -0.07
HDAC8-214ENST00000439122 LRP10Q7Z4F1 713 aa14.6□□□□□ -0.07
HDAC8-214ENST00000439122 ANP32BQ92688 251 aaKnown RBP14.6□□□□□ -0.07
HDAC8-214ENST00000439122 WDR33Q9C0J8 1336 aaKnown RBP14.6□□□□□ -0.07
HDAC8-214ENST00000439122 FAM227BQ96M60 508 aa14.6□□□□□ -0.07
HDAC8-214ENST00000439122 JAKMIP1Q96N16 626 aaKnown RBP14.6□□□□□ -0.07
HDAC8-214ENST00000439122 NSFL1CQ9UNZ2 370 aaKnown RBP14.6□□□□□ -0.07
HDAC8-214ENST00000439122 HIP1O00291 1037 aa14.59□□□□□ -0.07
HDAC8-214ENST00000439122 KCNJ4P48050 445 aa14.59□□□□□ -0.07
HDAC8-214ENST00000439122 UBE3BQ7Z3V4 1068 aa14.59□□□□□ -0.07
HDAC8-214ENST00000439122 ATP5J2-PTCD1G3V325 749 aa14.59□□□□□ -0.07
HDAC8-214ENST00000439122 PTCD1O75127 700 aaKnown RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms