RNA–Protein interactions for RNA: ENST00000439088.1

LINC00163-202, long intergenic non-protein coding RNA 163, humanhuman

TSL 1 (best)

Gene LINC00163, Length 2,135 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00163-202ENST00000439088 ITGB4P16144 1822 aa18.55■□□□□ 0.56
LINC00163-202ENST00000439088 HSP90AB4PQ58FF6 505 aa18.55■□□□□ 0.56
LINC00163-202ENST00000439088 DDB1Q16531 1140 aa18.55■□□□□ 0.56
LINC00163-202ENST00000439088 BARGINQ6ZT62 677 aa18.55■□□□□ 0.56
LINC00163-202ENST00000439088 PDE1AP54750 535 aa18.54■□□□□ 0.56
LINC00163-202ENST00000439088 JCADQ9P266 1359 aa18.54■□□□□ 0.56
LINC00163-202ENST00000439088 CDC45O75419 566 aa18.53■□□□□ 0.56
LINC00163-202ENST00000439088 MFAP1P55081 439 aaKnown RBP18.53■□□□□ 0.56
LINC00163-202ENST00000439088 KAZALD1Q96I82 304 aa18.53■□□□□ 0.56
LINC00163-202ENST00000439088 SUCLG2Q96I99 432 aa18.53■□□□□ 0.56
LINC00163-202ENST00000439088 SALL3Q9BXA9 1300 aa18.53■□□□□ 0.56
LINC00163-202ENST00000439088 AEBP2Q6ZN18 517 aaPredicted RBP18.53■□□□□ 0.56
LINC00163-202ENST00000439088 TBC1D9Q6ZT07 1266 aa18.53■□□□□ 0.56
LINC00163-202ENST00000439088 EIF5BO60841 1220 aaKnown RBP18.52■□□□□ 0.56
LINC00163-202ENST00000439088 UNC5CLQ8IV45 518 aa18.52■□□□□ 0.56
LINC00163-202ENST00000439088 KIF1BPQ96EK5 621 aa18.52■□□□□ 0.56
LINC00163-202ENST00000439088 C22orf23Q9BZE7 217 aa18.52■□□□□ 0.56
LINC00163-202ENST00000439088 STARD3NLO95772 234 aa18.52■□□□□ 0.55
LINC00163-202ENST00000439088 RHPN1Q8TCX5 695 aa18.52■□□□□ 0.55
LINC00163-202ENST00000439088 STAP2Q9UGK3 403 aa18.52■□□□□ 0.55
LINC00163-202ENST00000439088 ARFGEF2Q9Y6D5 1785 aa18.52■□□□□ 0.55
LINC00163-202ENST00000439088 TTLL7Q6ZT98 887 aa18.51■□□□□ 0.55
LINC00163-202ENST00000439088 DNAJC10Q8IXB1 793 aa18.51■□□□□ 0.55
LINC00163-202ENST00000439088 RBM42Q9BTD8 480 aaKnown RBP18.51■□□□□ 0.55
LINC00163-202ENST00000439088 BICC1Q9H694 974 aaKnown RBP18.51■□□□□ 0.55
LINC00163-202ENST00000439088 CCDC9Q9Y3X0 531 aaKnown RBP18.51■□□□□ 0.55
LINC00163-202ENST00000439088 MX1P20591 662 aa18.5■□□□□ 0.55
LINC00163-202ENST00000439088 PRIM1P49642 420 aaKnown RBP18.5■□□□□ 0.55
LINC00163-202ENST00000439088 SDSP20132 328 aa18.5■□□□□ 0.55
LINC00163-202ENST00000439088 COL15A1P39059 1388 aa18.49■□□□□ 0.55
LINC00163-202ENST00000439088 SYTL4Q96C24 671 aaPredicted RBP18.49■□□□□ 0.55
LINC00163-202ENST00000439088 DAXXQ9UER7 740 aaPredicted RBP18.49■□□□□ 0.55
LINC00163-202ENST00000439088 ATP5J2-PTCD1G3V325 749 aa18.49■□□□□ 0.55
LINC00163-202ENST00000439088 NGLY1Q96IV0 654 aa18.49■□□□□ 0.55
LINC00163-202ENST00000439088 AOX1Q06278 1338 aa18.48■□□□□ 0.55
LINC00163-202ENST00000439088 ERC1Q8IUD2 1116 aa18.48■□□□□ 0.55
LINC00163-202ENST00000439088 MARCH10Q8NA82 808 aaPredicted RBP18.48■□□□□ 0.55
LINC00163-202ENST00000439088 IL1RAPL2Q9NP60 686 aa18.48■□□□□ 0.55
LINC00163-202ENST00000439088 A0A087WZG4 1122 aa18.47■□□□□ 0.55
LINC00163-202ENST00000439088 VPS72Q15906 364 aa18.47■□□□□ 0.55
LINC00163-202ENST00000439088 CERKQ8TCT0 537 aa18.47■□□□□ 0.55
LINC00163-202ENST00000439088 C8orf37Q96NL8 207 aa18.47■□□□□ 0.55
LINC00163-202ENST00000439088 AFDNP55196 1824 aaKnown RBP18.47■□□□□ 0.55
LINC00163-202ENST00000439088 RBM25P49756 843 aaKnown RBP18.47■□□□□ 0.55
LINC00163-202ENST00000439088 OS9Q13438 667 aaPredicted RBP18.47■□□□□ 0.55
LINC00163-202ENST00000439088 SPATA31A6Q5VVP1 1343 aa18.46■□□□□ 0.55
LINC00163-202ENST00000439088 H7C1W4 665 aa18.46■□□□□ 0.55
LINC00163-202ENST00000439088 NUP188Q5SRE5 1749 aa18.46■□□□□ 0.55
LINC00163-202ENST00000439088 FNBP4Q8N3X1 1017 aaPredicted RBP18.46■□□□□ 0.55
LINC00163-202ENST00000439088 SLC4A9Q96Q91 983 aa18.46■□□□□ 0.55
LINC00163-202ENST00000439088 BCL9LQ86UU0 1499 aa18.46■□□□□ 0.55
LINC00163-202ENST00000439088 CYP19A1P11511 503 aaPredicted RBP18.46■□□□□ 0.55
LINC00163-202ENST00000439088 CASP7P55210 303 aa18.46■□□□□ 0.55
LINC00163-202ENST00000439088 CASC1Q6TDU7 716 aa18.46■□□□□ 0.55
LINC00163-202ENST00000439088 UBE3BQ7Z3V4 1068 aa18.46■□□□□ 0.55
LINC00163-202ENST00000439088 CCDC191Q8NCU4 936 aa18.46■□□□□ 0.55
LINC00163-202ENST00000439088 ZBTB3Q9H5J0 574 aa18.46■□□□□ 0.55
LINC00163-202ENST00000439088 CWC25Q9NXE8 425 aaPredicted RBP18.46■□□□□ 0.55
LINC00163-202ENST00000439088 EPHA10Q5JZY3 1008 aa18.45■□□□□ 0.54
LINC00163-202ENST00000439088 DOT1LQ8TEK3 1739 aa18.45■□□□□ 0.54
LINC00163-202ENST00000439088 BECN1Q14457 450 aa18.44■□□□□ 0.54
LINC00163-202ENST00000439088 RABL6Q3YEC7 729 aaPredicted RBP18.44■□□□□ 0.54
LINC00163-202ENST00000439088 PA2G4Q9UQ80 394 aaKnown RBP18.44■□□□□ 0.54
LINC00163-202ENST00000439088 KAT6BQ8WYB5 2073 aa18.44■□□□□ 0.54
LINC00163-202ENST00000439088 G3BP1Q13283 466 aaKnown RBP eCLIP18.44■□□□□ 0.54
LINC00163-202ENST00000439088 NUTM1Q86Y26 1132 aa18.44■□□□□ 0.54
LINC00163-202ENST00000439088 ANP32EQ9BTT0 268 aa18.44■□□□□ 0.54
LINC00163-202ENST00000439088 KIF6Q6ZMV9 814 aa18.43■□□□□ 0.54
LINC00163-202ENST00000439088 CLASRPQ8N2M8 674 aaKnown RBP18.43■□□□□ 0.54
LINC00163-202ENST00000439088 JARID2Q92833 1246 aaPredicted RBP18.43■□□□□ 0.54
LINC00163-202ENST00000439088 SLC4A3P48751 1232 aa18.43■□□□□ 0.54
LINC00163-202ENST00000439088 TCIRG1Q13488 830 aa18.43■□□□□ 0.54
LINC00163-202ENST00000439088 TSHZ3Q63HK5 1081 aa18.43■□□□□ 0.54
LINC00163-202ENST00000439088 ISCA1Q9BUE6 129 aa18.43■□□□□ 0.54
LINC00163-202ENST00000439088 TRIM28Q13263 835 aaKnown RBP18.42■□□□□ 0.54
LINC00163-202ENST00000439088 COPRSQ9NQ92 184 aa18.42■□□□□ 0.54
LINC00163-202ENST00000439088 USP42Q9H9J4 1324 aaKnown RBP18.42■□□□□ 0.54
LINC00163-202ENST00000439088 FAM98CQ17RN3 349 aaKnown RBP18.41■□□□□ 0.54
LINC00163-202ENST00000439088 ACSBG1Q96GR2 724 aa18.41■□□□□ 0.54
LINC00163-202ENST00000439088 ZNF330Q9Y3S2 320 aaPredicted RBP18.41■□□□□ 0.54
LINC00163-202ENST00000439088 SASH1O94885 1247 aa18.4■□□□□ 0.54
LINC00163-202ENST00000439088 RFX5P48382 616 aaPredicted RBP18.4■□□□□ 0.54
LINC00163-202ENST00000439088 TTC41PQ6P2S7 1318 aa18.4■□□□□ 0.54
LINC00163-202ENST00000439088 MAP3K15Q6ZN16 1313 aa18.4■□□□□ 0.54
LINC00163-202ENST00000439088 TUBGCP6Q96RT7 1819 aa18.4■□□□□ 0.54
LINC00163-202ENST00000439088 FOXO4P98177 505 aa18.4■□□□□ 0.54
LINC00163-202ENST00000439088 PI4K2BQ8TCG2 481 aa18.4■□□□□ 0.54
LINC00163-202ENST00000439088 USP21Q9UK80 565 aa18.39■□□□□ 0.53
LINC00163-202ENST00000439088 TRIM6-TRIM34B2RNG4 842 aa18.38■□□□□ 0.53
LINC00163-202ENST00000439088 IL6STP40189 918 aaPredicted RBP18.38■□□□□ 0.53
LINC00163-202ENST00000439088 GIGYF2Q6Y7W6 1299 aaKnown RBP18.38■□□□□ 0.53
LINC00163-202ENST00000439088 TJP1Q07157 1748 aa18.38■□□□□ 0.53
LINC00163-202ENST00000439088 IFIT2P09913 472 aaKnown RBP18.38■□□□□ 0.53
LINC00163-202ENST00000439088 PTPN12Q05209 780 aaKnown RBP18.38■□□□□ 0.53
LINC00163-202ENST00000439088 LMBR1LQ6UX01 489 aa18.38■□□□□ 0.53
LINC00163-202ENST00000439088 ZBTB1Q9Y2K1 713 aa18.38■□□□□ 0.53
LINC00163-202ENST00000439088 A0A0G2JS52 829 aa18.37■□□□□ 0.53
LINC00163-202ENST00000439088 KLHDC4Q8TBB5 520 aa18.37■□□□□ 0.53
LINC00163-202ENST00000439088 SMARCC1Q92922 1105 aaPredicted RBP18.37■□□□□ 0.53
LINC00163-202ENST00000439088 RILPL2Q969X0 211 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms