RNA–Protein interactions for RNA: ENST00000439027.1

AC011228.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC011228.1, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011228.1-201ENST00000439027 A1BGP04217 495 aa12.23□□□□□ -0.45
AC011228.1-201ENST00000439027 C16orf71Q8IYS4 520 aaPredicted RBP12.23□□□□□ -0.45
AC011228.1-201ENST00000439027 NPHP1O15259 732 aa12.22□□□□□ -0.45
AC011228.1-201ENST00000439027 TOMM70O94826 608 aa12.22□□□□□ -0.45
AC011228.1-201ENST00000439027 IL6STP40189 918 aaPredicted RBP12.22□□□□□ -0.45
AC011228.1-201ENST00000439027 TBC1D9BQ66K14 1250 aa12.22□□□□□ -0.45
AC011228.1-201ENST00000439027 MCM10Q7L590 875 aa12.22□□□□□ -0.45
AC011228.1-201ENST00000439027 TTLL6Q8N841 843 aa12.22□□□□□ -0.45
AC011228.1-201ENST00000439027 ADAMTS7Q9UKP4 1686 aa12.22□□□□□ -0.45
AC011228.1-201ENST00000439027 BRCA1P38398 1863 aaKnown RBP12.21□□□□□ -0.45
AC011228.1-201ENST00000439027 KDM2BQ8NHM5 1336 aa12.21□□□□□ -0.45
AC011228.1-201ENST00000439027 RASSF7Q02833 373 aa12.21□□□□□ -0.45
AC011228.1-201ENST00000439027 CCDC24Q8N4L8 307 aa12.21□□□□□ -0.45
AC011228.1-201ENST00000439027 ZNF622Q969S3 477 aaKnown RBP eCLIP12.21□□□□□ -0.45
AC011228.1-201ENST00000439027 ARFGEF1Q9Y6D6 1849 aa12.21□□□□□ -0.46
AC011228.1-201ENST00000439027 ANP32CO43423 234 aa12.2□□□□□ -0.46
AC011228.1-201ENST00000439027 APLP1P51693 650 aa12.2□□□□□ -0.46
AC011228.1-201ENST00000439027 ZNF579Q8NAF0 562 aaKnown RBP12.2□□□□□ -0.46
AC011228.1-201ENST00000439027 SETDB2Q96T68 719 aa12.2□□□□□ -0.46
AC011228.1-201ENST00000439027 RRAGCQ9HB90 399 aa12.2□□□□□ -0.46
AC011228.1-201ENST00000439027 CARMIL3Q8ND23 1372 aa12.19□□□□□ -0.46
AC011228.1-201ENST00000439027 CEMIPQ8WUJ3 1361 aa12.19□□□□□ -0.46
AC011228.1-201ENST00000439027 AFDNP55196 1824 aaKnown RBP12.19□□□□□ -0.46
AC011228.1-201ENST00000439027 PDE6BP35913 854 aa12.19□□□□□ -0.46
AC011228.1-201ENST00000439027 PIP4K2AP48426 406 aaPredicted RBP12.19□□□□□ -0.46
AC011228.1-201ENST00000439027 DCTN1Q14203 1278 aa12.19□□□□□ -0.46
AC011228.1-201ENST00000439027 DZIP3Q86Y13 1208 aaKnown RBP12.19□□□□□ -0.46
AC011228.1-201ENST00000439027 BRIP1Q9BX63 1249 aa12.19□□□□□ -0.46
AC011228.1-201ENST00000439027 USP16Q9Y5T5 823 aa12.19□□□□□ -0.46
AC011228.1-201ENST00000439027 UBR2Q8IWV8 1755 aa12.19□□□□□ -0.46
AC011228.1-201ENST00000439027 PRAMEF22A3QJZ6 481 aa12.18□□□□□ -0.46
AC011228.1-201ENST00000439027 CAMTA2O94983 1202 aa12.18□□□□□ -0.46
AC011228.1-201ENST00000439027 NEFMP07197 916 aa12.18□□□□□ -0.46
AC011228.1-201ENST00000439027 SNRPA1P09661 255 aaKnown RBP12.18□□□□□ -0.46
AC011228.1-201ENST00000439027 LMNB1P20700 586 aa12.18□□□□□ -0.46
AC011228.1-201ENST00000439027 PRR5LQ6MZQ0 368 aa12.18□□□□□ -0.46
AC011228.1-201ENST00000439027 CNBD1Q8NA66 436 aa12.18□□□□□ -0.46
AC011228.1-201ENST00000439027 RBM46Q8TBY0 533 aaKnown RBP12.18□□□□□ -0.46
AC011228.1-201ENST00000439027 ST5P78524 1137 aa12.17□□□□□ -0.46
AC011228.1-201ENST00000439027 MIS18AQ9NYP9 233 aa12.17□□□□□ -0.46
AC011228.1-201ENST00000439027 PDZRN3Q9UPQ7 1066 aa12.17□□□□□ -0.46
AC011228.1-201ENST00000439027 HTATSF1O43719 755 aaKnown RBP12.16□□□□□ -0.46
AC011228.1-201ENST00000439027 C21orf2O43822 256 aa12.16□□□□□ -0.46
AC011228.1-201ENST00000439027 CLCN6P51797 869 aa12.16□□□□□ -0.46
AC011228.1-201ENST00000439027 TAF7Q15545 349 aaPredicted RBP12.16□□□□□ -0.46
AC011228.1-201ENST00000439027 SIPA1L3O60292 1781 aaPredicted RBP12.15□□□□□ -0.46
AC011228.1-201ENST00000439027 NRXN2Q9P2S2 1712 aa12.15□□□□□ -0.46
AC011228.1-201ENST00000439027 NFKBIEO00221 500 aa12.15□□□□□ -0.46
AC011228.1-201ENST00000439027 PRELPP51888 382 aa12.15□□□□□ -0.46
AC011228.1-201ENST00000439027 IFFO2Q5TF58 517 aa12.15□□□□□ -0.46
AC011228.1-201ENST00000439027 NBPF5PQ86XG9 351 aaPredicted RBP12.15□□□□□ -0.46
AC011228.1-201ENST00000439027 PRKRIP1Q9H875 184 aaPredicted RBP12.15□□□□□ -0.46
AC011228.1-201ENST00000439027 ZNF652Q9Y2D9 606 aa12.15□□□□□ -0.46
AC011228.1-201ENST00000439027 SBF1O95248 1867 aa12.14□□□□□ -0.47
AC011228.1-201ENST00000439027 FAM177BA6PVY3 158 aa12.14□□□□□ -0.47
AC011228.1-201ENST00000439027 FSTL1Q12841 308 aa12.14□□□□□ -0.47
AC011228.1-201ENST00000439027 CNKSR1Q969H4 720 aa12.14□□□□□ -0.47
AC011228.1-201ENST00000439027 ZBTB47Q9UFB7 747 aaPredicted RBP12.14□□□□□ -0.47
AC011228.1-201ENST00000439027 ZC3H4Q9UPT8 1303 aaKnown RBP12.13□□□□□ -0.47
AC011228.1-201ENST00000439027 GLTPD2A6NH11 291 aa12.13□□□□□ -0.47
AC011228.1-201ENST00000439027 NBPF26B4DH59 902 aa12.13□□□□□ -0.47
AC011228.1-201ENST00000439027 VEGFAP15692 232 aaPredicted RBP12.13□□□□□ -0.47
AC011228.1-201ENST00000439027 HTRA3P83110 453 aa12.13□□□□□ -0.47
AC011228.1-201ENST00000439027 STYK1Q6J9G0 422 aa12.13□□□□□ -0.47
AC011228.1-201ENST00000439027 NBPF10Q6P3W6 841 aaKnown RBP12.13□□□□□ -0.47
AC011228.1-201ENST00000439027 CLEC4GQ6UXB4 293 aa12.13□□□□□ -0.47
AC011228.1-201ENST00000439027 NGEFQ8N5V2 710 aa12.13□□□□□ -0.47
AC011228.1-201ENST00000439027 NBPF15Q8N660 670 aa12.13□□□□□ -0.47
AC011228.1-201ENST00000439027 SMC1BQ8NDV3 1235 aa12.13□□□□□ -0.47
AC011228.1-201ENST00000439027 NIP7Q9Y221 180 aaKnown RBP eCLIP12.13□□□□□ -0.47
AC011228.1-201ENST00000439027 SRGNP10124 158 aa12.12□□□□□ -0.47
AC011228.1-201ENST00000439027 RALBP1Q15311 655 aa12.12□□□□□ -0.47
AC011228.1-201ENST00000439027 ERFEQ4G0M1 354 aa12.12□□□□□ -0.47
AC011228.1-201ENST00000439027 DPY19L2Q6NUT2 758 aa12.12□□□□□ -0.47
AC011228.1-201ENST00000439027 PRPF40BQ6NWY9 871 aaKnown RBP12.12□□□□□ -0.47
AC011228.1-201ENST00000439027 DNAJC5GQ8N7S2 189 aa12.12□□□□□ -0.47
AC011228.1-201ENST00000439027 PNISRQ8TF01 805 aaKnown RBP12.12□□□□□ -0.47
AC011228.1-201ENST00000439027 MASTLQ96GX5 879 aa12.12□□□□□ -0.47
AC011228.1-201ENST00000439027 SCN7AQ01118 1682 aa12.11□□□□□ -0.47
AC011228.1-201ENST00000439027 GTF2E1P29083 439 aaPredicted RBP12.11□□□□□ -0.47
AC011228.1-201ENST00000439027 NFE2L2Q16236 605 aa12.11□□□□□ -0.47
AC011228.1-201ENST00000439027 TPTE2Q6XPS3 522 aa12.11□□□□□ -0.47
AC011228.1-201ENST00000439027 THUMPD2Q9BTF0 503 aaKnown RBP12.11□□□□□ -0.47
AC011228.1-201ENST00000439027 TSPYL2Q9H2G4 693 aaPredicted RBP12.11□□□□□ -0.47
AC011228.1-201ENST00000439027 TAOK3Q9H2K8 898 aa12.11□□□□□ -0.47
AC011228.1-201ENST00000439027 PNNQ9H307 717 aaKnown RBP12.11□□□□□ -0.47
AC011228.1-201ENST00000439027 RRP7AQ9Y3A4 280 aaKnown RBP12.11□□□□□ -0.47
AC011228.1-201ENST00000439027 MAPK8IP3Q9UPT6 1336 aa12.11□□□□□ -0.47
AC011228.1-201ENST00000439027 ANKRD31Q8N7Z5 1873 aa12.1□□□□□ -0.47
AC011228.1-201ENST00000439027 DLEC1Q9Y238 1755 aa12.1□□□□□ -0.47
AC011228.1-201ENST00000439027 VASPP50552 380 aaPredicted RBP12.1□□□□□ -0.47
AC011228.1-201ENST00000439027 HLFQ16534 295 aa12.1□□□□□ -0.47
AC011228.1-201ENST00000439027 SOGA3Q5TF21 947 aa12.1□□□□□ -0.47
AC011228.1-201ENST00000439027 PHF12Q96QT6 1004 aa12.1□□□□□ -0.47
AC011228.1-201ENST00000439027 CCDC88AQ3V6T2 1871 aa12.1□□□□□ -0.47
AC011228.1-201ENST00000439027 NPR1P16066 1061 aa12.09□□□□□ -0.47
AC011228.1-201ENST00000439027 PLEKHF1Q96S99 279 aa12.09□□□□□ -0.47
AC011228.1-201ENST00000439027 MYL6BP14649 208 aa12.08□□□□□ -0.48
AC011228.1-201ENST00000439027 EIF4A1P60842 406 aaKnown RBP12.08□□□□□ -0.48
AC011228.1-201ENST00000439027 KIF6Q6ZMV9 814 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms