RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 PLEKHO1Q53GL0 409 aaPredicted RBP15.47■□□□□ 0.07
CSTF3-203ENST00000438862 LDHDQ86WU2 507 aa15.47■□□□□ 0.07
CSTF3-203ENST00000438862 NRXN2Q9P2S2 1712 aa15.47■□□□□ 0.07
CSTF3-203ENST00000438862 PDZRN3Q9UPQ7 1066 aa15.47■□□□□ 0.07
CSTF3-203ENST00000438862 ANKRD26Q9UPS8 1709 aa15.47■□□□□ 0.07
CSTF3-203ENST00000438862 TTLL13PA6NNM8 815 aa15.46■□□□□ 0.07
CSTF3-203ENST00000438862 HSPA8P11142 646 aaKnown RBP15.46■□□□□ 0.07
CSTF3-203ENST00000438862 NARFQ9UHQ1 456 aa15.46■□□□□ 0.07
CSTF3-203ENST00000438862 ADAMTS7Q9UKP4 1686 aa15.46■□□□□ 0.07
CSTF3-203ENST00000438862 DDNO94850 711 aaPredicted RBP15.45■□□□□ 0.06
CSTF3-203ENST00000438862 MTHFSP49914 203 aa15.45■□□□□ 0.06
CSTF3-203ENST00000438862 DEFB115Q30KQ5 88 aa15.45■□□□□ 0.06
CSTF3-203ENST00000438862 AMOTQ4VCS5 1084 aa15.45■□□□□ 0.06
CSTF3-203ENST00000438862 NFATC2IPQ8NCF5 419 aa15.45■□□□□ 0.06
CSTF3-203ENST00000438862 LTBP3Q9NS15 1303 aa15.44■□□□□ 0.06
CSTF3-203ENST00000438862 CCDC85CA6NKD9 419 aa15.44■□□□□ 0.06
CSTF3-203ENST00000438862 ITGBL1O95965 494 aaPredicted RBP15.44■□□□□ 0.06
CSTF3-203ENST00000438862 CDCA8Q53HL2 280 aa15.44■□□□□ 0.06
CSTF3-203ENST00000438862 POTEGQ6S5H5 508 aa15.44■□□□□ 0.06
CSTF3-203ENST00000438862 MAMSTRQ6ZN01 415 aa15.44■□□□□ 0.06
CSTF3-203ENST00000438862 FER1L6Q2WGJ9 1857 aa15.44■□□□□ 0.06
CSTF3-203ENST00000438862 SCN4AP35499 1836 aa15.43■□□□□ 0.06
CSTF3-203ENST00000438862 RASSF10A6NK89 507 aa15.43■□□□□ 0.06
CSTF3-203ENST00000438862 EIF4A2Q14240 407 aaKnown RBP15.43■□□□□ 0.06
CSTF3-203ENST00000438862 ZNF530Q6P9A1 599 aaPredicted RBP15.43■□□□□ 0.06
CSTF3-203ENST00000438862 POLKQ9UBT6 870 aa15.43■□□□□ 0.06
CSTF3-203ENST00000438862 TJP1Q07157 1748 aa15.43■□□□□ 0.06
CSTF3-203ENST00000438862 SOS1Q07889 1333 aaPredicted RBP15.43■□□□□ 0.06
CSTF3-203ENST00000438862 C21orf2O43822 256 aa15.42■□□□□ 0.06
CSTF3-203ENST00000438862 LCE2DQ5TA82 110 aaPredicted RBP15.42■□□□□ 0.06
CSTF3-203ENST00000438862 ZNF622Q969S3 477 aaKnown RBP eCLIP15.42■□□□□ 0.065e-17■■□□□ 12.5
CSTF3-203ENST00000438862 L3MBTL3Q96JM7 780 aaPredicted RBP15.42■□□□□ 0.06
CSTF3-203ENST00000438862 CARD14Q9BXL6 1004 aa15.42■□□□□ 0.06
CSTF3-203ENST00000438862 TAOK3Q9H2K8 898 aa15.42■□□□□ 0.06
CSTF3-203ENST00000438862 TAF1DQ9H5J8 278 aaPredicted RBP15.42■□□□□ 0.06
CSTF3-203ENST00000438862 COLQQ9Y215 455 aaPredicted RBP15.42■□□□□ 0.06
CSTF3-203ENST00000438862 PDE6BP35913 854 aa15.41■□□□□ 0.06
CSTF3-203ENST00000438862 C1orf141Q5JVX7 400 aa15.41■□□□□ 0.06
CSTF3-203ENST00000438862 WDR33Q9C0J8 1336 aaKnown RBP15.41■□□□□ 0.06
CSTF3-203ENST00000438862 DNAJC10Q8IXB1 793 aa15.4■□□□□ 0.06
CSTF3-203ENST00000438862 BRIP1Q9BX63 1249 aa15.4■□□□□ 0.06
CSTF3-203ENST00000438862 PCDHB13Q9Y5F0 798 aa15.4■□□□□ 0.06
CSTF3-203ENST00000438862 SOGA3Q5TF21 947 aa15.39■□□□□ 0.05
CSTF3-203ENST00000438862 BEGAINQ9BUH8 593 aa15.39■□□□□ 0.05
CSTF3-203ENST00000438862 BCL2L12Q9HB09 334 aa15.39■□□□□ 0.05
CSTF3-203ENST00000438862 ZBTB47Q9UFB7 747 aaPredicted RBP15.39■□□□□ 0.05
CSTF3-203ENST00000438862 COL15A1P39059 1388 aa15.38■□□□□ 0.05
CSTF3-203ENST00000438862 CYP19A1P11511 503 aaPredicted RBP15.38■□□□□ 0.05
CSTF3-203ENST00000438862 EAPPQ56P03 285 aaPredicted RBP15.37■□□□□ 0.05
CSTF3-203ENST00000438862 PNMA8AQ86V59 439 aaPredicted RBP15.37■□□□□ 0.05
CSTF3-203ENST00000438862 CNKSR1Q969H4 720 aa15.37■□□□□ 0.05
CSTF3-203ENST00000438862 SCUBE2Q9NQ36 999 aa15.37■□□□□ 0.05
CSTF3-203ENST00000438862 CARMIL3Q8ND23 1372 aa15.36■□□□□ 0.05
CSTF3-203ENST00000438862 IFNL1Q8IU54 200 aa15.36■□□□□ 0.05
CSTF3-203ENST00000438862 CNTROBQ8N137 903 aa15.36■□□□□ 0.05
CSTF3-203ENST00000438862 PCGF6Q9BYE7 350 aa15.36■□□□□ 0.05
CSTF3-203ENST00000438862 HACL1Q9UJ83 578 aa15.36■□□□□ 0.05
CSTF3-203ENST00000438862 ECE1P42892 770 aa15.35■□□□□ 0.05
CSTF3-203ENST00000438862 ABT1Q9ULW3 272 aaKnown RBP15.35■□□□□ 0.05
CSTF3-203ENST00000438862 TRIM35Q9UPQ4 493 aa15.35■□□□□ 0.05
CSTF3-203ENST00000438862 ANKRD31Q8N7Z5 1873 aa15.34■□□□□ 0.05
CSTF3-203ENST00000438862 A0A087WZG4 1122 aa15.34■□□□□ 0.05
CSTF3-203ENST00000438862 EPHX2P34913 555 aa15.34■□□□□ 0.05
CSTF3-203ENST00000438862 STYK1Q6J9G0 422 aa15.34■□□□□ 0.05
CSTF3-203ENST00000438862 BICDL1Q6ZP65 573 aa15.34■□□□□ 0.05
CSTF3-203ENST00000438862 ZBTB1Q9Y2K1 713 aa15.34■□□□□ 0.05
CSTF3-203ENST00000438862 VSIG10Q8N0Z9 540 aa15.33■□□□□ 0.04
CSTF3-203ENST00000438862 SCN11AQ9UI33 1791 aa15.33■□□□□ 0.04
CSTF3-203ENST00000438862 ADAMTSL1Q8N6G6 1762 aa15.32■□□□□ 0.04
CSTF3-203ENST00000438862 MAP1SQ66K74 1059 aaPredicted RBP15.32■□□□□ 0.04
CSTF3-203ENST00000438862 PRR5LQ6MZQ0 368 aa15.32■□□□□ 0.04
CSTF3-203ENST00000438862 PRPF40BQ6NWY9 871 aaKnown RBP15.32■□□□□ 0.04
CSTF3-203ENST00000438862 CFAP44Q96MT7 982 aa15.32■□□□□ 0.04
CSTF3-203ENST00000438862 GPR101Q96P66 508 aaPredicted RBP15.32■□□□□ 0.04
CSTF3-203ENST00000438862 SLC52A2Q9HAB3 445 aa15.32■□□□□ 0.04
CSTF3-203ENST00000438862 SLX4Q8IY92 1834 aa15.31■□□□□ 0.04
CSTF3-203ENST00000438862 TBC1D9BQ66K14 1250 aa15.31■□□□□ 0.04
CSTF3-203ENST00000438862 MASTLQ96GX5 879 aa15.31■□□□□ 0.04
CSTF3-203ENST00000438862 CAPNS2Q96L46 248 aa15.31■□□□□ 0.04
CSTF3-203ENST00000438862 DDX21Q9NR30 783 aaKnown RBP eCLIP15.31■□□□□ 0.04
CSTF3-203ENST00000438862 SRGNP10124 158 aa15.3■□□□□ 0.04
CSTF3-203ENST00000438862 CANXP27824 592 aaKnown RBP15.3■□□□□ 0.04
CSTF3-203ENST00000438862 MAP2K2P36507 400 aa15.3■□□□□ 0.04
CSTF3-203ENST00000438862 TNNT2P45379 298 aaPredicted RBP15.3■□□□□ 0.04
CSTF3-203ENST00000438862 EIF5P55010 431 aaKnown RBP15.3■□□□□ 0.04
CSTF3-203ENST00000438862 AKAP4Q5JQC9 854 aa15.3■□□□□ 0.04
CSTF3-203ENST00000438862 FAM212AQ96EL1 285 aa15.3■□□□□ 0.04
CSTF3-203ENST00000438862 COL11A2P13942 1736 aaPredicted RBP15.29■□□□□ 0.04
CSTF3-203ENST00000438862 THSD7BQ9C0I4 1608 aa15.29■□□□□ 0.04
CSTF3-203ENST00000438862 CA12O43570 354 aa15.29■□□□□ 0.04
CSTF3-203ENST00000438862 STARD3NLO95772 234 aa15.29■□□□□ 0.04
CSTF3-203ENST00000438862 CCDC93Q567U6 631 aa15.29■□□□□ 0.04
CSTF3-203ENST00000438862 MCOLN1Q9GZU1 580 aa15.29■□□□□ 0.04
CSTF3-203ENST00000438862 ARFGEF2Q9Y6D5 1785 aa15.29■□□□□ 0.04
CSTF3-203ENST00000438862 NPHP1O15259 732 aa15.28■□□□□ 0.04
CSTF3-203ENST00000438862 ST5P78524 1137 aa15.28■□□□□ 0.04
CSTF3-203ENST00000438862 FKBP4Q02790 459 aaKnown RBP eCLIP15.28■□□□□ 0.04
CSTF3-203ENST00000438862 SLC39A6Q13433 755 aa15.28■□□□□ 0.04
CSTF3-203ENST00000438862 PAXIP1Q6ZW49 1069 aaPredicted RBP15.28■□□□□ 0.04
CSTF3-203ENST00000438862 AEBP1Q8IUX7 1158 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms