RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 TPCN2Q8NHX9 752 aa7.66□□□□□ -1.18
HMGB1P31-201ENST00000437242 RHPN1Q8TCX5 695 aa7.66□□□□□ -1.18
HMGB1P31-201ENST00000437242 ALAS2P22557 587 aa7.65□□□□□ -1.18
HMGB1P31-201ENST00000437242 ATP1A2P50993 1020 aa7.65□□□□□ -1.18
HMGB1P31-201ENST00000437242 XP32Q5T750 250 aa7.65□□□□□ -1.18
HMGB1P31-201ENST00000437242 TRIM11Q96F44 468 aa7.65□□□□□ -1.18
HMGB1P31-201ENST00000437242 CHMP3Q9Y3E7 222 aa7.65□□□□□ -1.18
HMGB1P31-201ENST00000437242 USP17L3A6NCW0 530 aa7.64□□□□□ -1.19
HMGB1P31-201ENST00000437242 USP17L4A6NCW7 530 aa7.64□□□□□ -1.19
HMGB1P31-201ENST00000437242 UBTFP17480 764 aaKnown RBP7.64□□□□□ -1.19
HMGB1P31-201ENST00000437242 USP17L2Q6R6M4 530 aa7.64□□□□□ -1.19
HMGB1P31-201ENST00000437242 USP17L1Q7RTZ2 530 aa7.64□□□□□ -1.19
HMGB1P31-201ENST00000437242 PLVAPQ9BX97 442 aa7.64□□□□□ -1.19
HMGB1P31-201ENST00000437242 SPDYE3A6NKU9 549 aa7.63□□□□□ -1.19
HMGB1P31-201ENST00000437242 POM121CA8CG34 1229 aa7.63□□□□□ -1.19
HMGB1P31-201ENST00000437242 SPATA31C1P0DKV0 1188 aa7.63□□□□□ -1.19
HMGB1P31-201ENST00000437242 PSMA6P60900 246 aaKnown RBP7.63□□□□□ -1.19
HMGB1P31-201ENST00000437242 SH3PXD2AQ5TCZ1 1133 aa7.63□□□□□ -1.19
HMGB1P31-201ENST00000437242 CCDC102BQ68D86 513 aa7.63□□□□□ -1.19
HMGB1P31-201ENST00000437242 PLEKHM2Q8IWE5 1019 aa7.63□□□□□ -1.19
HMGB1P31-201ENST00000437242 KIAA1024Q9UPX6 916 aa7.63□□□□□ -1.19
HMGB1P31-201ENST00000437242 SIN3BO75182 1162 aa7.62□□□□□ -1.19
HMGB1P31-201ENST00000437242 FLIIQ13045 1269 aa7.62□□□□□ -1.19
HMGB1P31-201ENST00000437242 TSPAN10Q9H1Z9 355 aaPredicted RBP7.62□□□□□ -1.19
HMGB1P31-201ENST00000437242 ATP9BO43861 1147 aa7.61□□□□□ -1.19
HMGB1P31-201ENST00000437242 CLDN10P78369 228 aa7.61□□□□□ -1.19
HMGB1P31-201ENST00000437242 SFSWAPQ12872 951 aaKnown RBP7.61□□□□□ -1.19
HMGB1P31-201ENST00000437242 NEUROD1Q13562 356 aa7.61□□□□□ -1.19
HMGB1P31-201ENST00000437242 PRRT3Q5FWE3 981 aa7.61□□□□□ -1.19
HMGB1P31-201ENST00000437242 ADAMTS19Q8TE59 1207 aa7.61□□□□□ -1.19
HMGB1P31-201ENST00000437242 RBM19Q9Y4C8 960 aaKnown RBP7.61□□□□□ -1.19
HMGB1P31-201ENST00000437242 ADARB2-AS1A8MUL3 147 aa7.6□□□□□ -1.19
HMGB1P31-201ENST00000437242 ZBTB7BO15156 539 aaPredicted RBP7.6□□□□□ -1.19
HMGB1P31-201ENST00000437242 HIRAP54198 1017 aaPredicted RBP7.6□□□□□ -1.19
HMGB1P31-201ENST00000437242 SPEM2Q0P670 501 aa7.6□□□□□ -1.19
HMGB1P31-201ENST00000437242 C1orf53Q5VUE5 145 aa7.6□□□□□ -1.19
HMGB1P31-201ENST00000437242 OGFOD1Q8N543 542 aa7.6□□□□□ -1.19
HMGB1P31-201ENST00000437242 HSH2DQ96JZ2 352 aa7.6□□□□□ -1.19
HMGB1P31-201ENST00000437242 CEP63Q96MT8 703 aa7.6□□□□□ -1.19
HMGB1P31-201ENST00000437242 UCN2Q96RP3 112 aa7.6□□□□□ -1.19
HMGB1P31-201ENST00000437242 SLC30A3Q99726 388 aa7.6□□□□□ -1.19
HMGB1P31-201ENST00000437242 MDFIQ99750 246 aa7.6□□□□□ -1.19
HMGB1P31-201ENST00000437242 PHACTR1Q9C0D0 580 aa7.6□□□□□ -1.19
HMGB1P31-201ENST00000437242 BRD7Q9NPI1 651 aa7.6□□□□□ -1.19
HMGB1P31-201ENST00000437242 ANKIB1Q9P2G1 1089 aa7.6□□□□□ -1.19
HMGB1P31-201ENST00000437242 PALM3A6NDB9 673 aaPredicted RBP7.59□□□□□ -1.19
HMGB1P31-201ENST00000437242 M0R082 166 aa7.59□□□□□ -1.19
HMGB1P31-201ENST00000437242 M0R2N6 131 aa7.59□□□□□ -1.19
HMGB1P31-201ENST00000437242 GATA4P43694 442 aa7.59□□□□□ -1.19
HMGB1P31-201ENST00000437242 DOC2BQ14184 412 aa7.59□□□□□ -1.19
HMGB1P31-201ENST00000437242 HDGFL1Q5TGJ6 251 aa7.59□□□□□ -1.19
HMGB1P31-201ENST00000437242 LARGE2Q8N3Y3 721 aa7.59□□□□□ -1.19
HMGB1P31-201ENST00000437242 ZNF417Q8TAU3 575 aa7.59□□□□□ -1.19
HMGB1P31-201ENST00000437242 C7orf43Q8WVR3 580 aa7.59□□□□□ -1.19
HMGB1P31-201ENST00000437242 TNFRSF25Q93038 417 aa7.59□□□□□ -1.19
HMGB1P31-201ENST00000437242 ZNF587Q96SQ5 575 aaPredicted RBP7.59□□□□□ -1.19
HMGB1P31-201ENST00000437242 HCN4Q9Y3Q4 1203 aa7.59□□□□□ -1.19
HMGB1P31-201ENST00000437242 APBA3O96018 575 aa7.58□□□□□ -1.2
HMGB1P31-201ENST00000437242 PRKCSHP14314 528 aaPredicted RBP7.58□□□□□ -1.2
HMGB1P31-201ENST00000437242 ADH7P40394 386 aa7.58□□□□□ -1.2
HMGB1P31-201ENST00000437242 RAB44Q7Z6P3 723 aaPredicted RBP7.58□□□□□ -1.2
HMGB1P31-201ENST00000437242 ZNF594Q96JF6 807 aaPredicted RBP7.58□□□□□ -1.2
HMGB1P31-201ENST00000437242 MKRN1Q9UHC7 482 aaKnown RBP7.58□□□□□ -1.2
HMGB1P31-201ENST00000437242 PPP1R12BO60237 982 aaPredicted RBP7.57□□□□□ -1.2
HMGB1P31-201ENST00000437242 ALBP02768 609 aa7.57□□□□□ -1.2
HMGB1P31-201ENST00000437242 SIX5Q8N196 739 aa7.57□□□□□ -1.2
HMGB1P31-201ENST00000437242 Q8N3U1 123 aa7.57□□□□□ -1.2
HMGB1P31-201ENST00000437242 TSEN2Q8NCE0 465 aaKnown RBP7.57□□□□□ -1.2
HMGB1P31-201ENST00000437242 SFI1A8K8P3 1242 aa7.56□□□□□ -1.2
HMGB1P31-201ENST00000437242 TYRO3Q06418 890 aa7.56□□□□□ -1.2
HMGB1P31-201ENST00000437242 POTEAQ6S8J7 498 aa7.56□□□□□ -1.2
HMGB1P31-201ENST00000437242 SUSD3Q96L08 255 aa7.56□□□□□ -1.2
HMGB1P31-201ENST00000437242 SEMA6BQ9H3T3 888 aa7.56□□□□□ -1.2
HMGB1P31-201ENST00000437242 PRDM6Q9NQX0 595 aa7.56□□□□□ -1.2
HMGB1P31-201ENST00000437242 KCNH4Q9UQ05 1017 aa7.56□□□□□ -1.2
HMGB1P31-201ENST00000437242 FAM229AH3BQW9 127 aa7.55□□□□□ -1.2
HMGB1P31-201ENST00000437242 KCNQ4P56696 695 aa7.55□□□□□ -1.2
HMGB1P31-201ENST00000437242 MICALL1Q8N3F8 863 aa7.55□□□□□ -1.2
HMGB1P31-201ENST00000437242 STARD13Q9Y3M8 1113 aa7.55□□□□□ -1.2
HMGB1P31-201ENST00000437242 TBC1D8BQ0IIM8 1120 aa7.54□□□□□ -1.2
HMGB1P31-201ENST00000437242 TRIM28Q13263 835 aaKnown RBP7.54□□□□□ -1.2
HMGB1P31-201ENST00000437242 HIF1AQ16665 826 aa7.54□□□□□ -1.2
HMGB1P31-201ENST00000437242 C8orf86Q6ZUL3 223 aa7.54□□□□□ -1.2
HMGB1P31-201ENST00000437242 ZNF280CQ8ND82 737 aa7.54□□□□□ -1.2
HMGB1P31-201ENST00000437242 BHMTQ93088 406 aa7.54□□□□□ -1.2
HMGB1P31-201ENST00000437242 NACC1Q96RE7 527 aa7.54□□□□□ -1.2
HMGB1P31-201ENST00000437242 ALDH16A1Q8IZ83 802 aa7.53□□□□□ -1.2
HMGB1P31-201ENST00000437242 C21orf2O43822 256 aa7.52□□□□□ -1.21
HMGB1P31-201ENST00000437242 RASA1P20936 1047 aa7.52□□□□□ -1.21
HMGB1P31-201ENST00000437242 COL9A3Q14050 684 aaPredicted RBP7.52□□□□□ -1.21
HMGB1P31-201ENST00000437242 STAG2Q8N3U4 1231 aa7.52□□□□□ -1.21
HMGB1P31-201ENST00000437242 SCG3Q8WXD2 468 aaKnown RBP7.52□□□□□ -1.21
HMGB1P31-201ENST00000437242 NGLY1Q96IV0 654 aa7.52□□□□□ -1.21
HMGB1P31-201ENST00000437242 UBE2OQ9C0C9 1292 aaKnown RBP7.52□□□□□ -1.21
HMGB1P31-201ENST00000437242 ATAD2Q6PL18 1390 aa7.51□□□□□ -1.21
HMGB1P31-201ENST00000437242 LILRB5O75023 590 aa7.51□□□□□ -1.21
HMGB1P31-201ENST00000437242 NID1P14543 1247 aa7.51□□□□□ -1.21
HMGB1P31-201ENST00000437242 ITGB7P26010 798 aa7.51□□□□□ -1.21
HMGB1P31-201ENST00000437242 SEC13P55735 322 aa7.51□□□□□ -1.21
HMGB1P31-201ENST00000437242 BTLAQ7Z6A9 289 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms