RNA–Protein interactions for RNA: ENST00000437025.6

GABRA1-204, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-204ENST00000437025 CHRNA2Q15822 529 aa12.85□□□□□ -0.35
GABRA1-204ENST00000437025 CNPY4Q8N129 248 aa12.85□□□□□ -0.35
GABRA1-204ENST00000437025 KCNH5Q8NCM2 988 aa12.85□□□□□ -0.35
GABRA1-204ENST00000437025 GADD45BO75293 160 aaPredicted RBP12.85□□□□□ -0.35
GABRA1-204ENST00000437025 DDX58O95786 925 aaKnown RBP12.85□□□□□ -0.35
GABRA1-204ENST00000437025 RASEFQ8IZ41 740 aa12.85□□□□□ -0.35
GABRA1-204ENST00000437025 SYAP1Q96A49 352 aaPredicted RBP12.85□□□□□ -0.35
GABRA1-204ENST00000437025 GLRX3O76003 335 aaKnown RBP12.85□□□□□ -0.35
GABRA1-204ENST00000437025 AK2P54819 239 aa12.85□□□□□ -0.35
GABRA1-204ENST00000437025 KDRP35968 1356 aa12.85□□□□□ -0.35
GABRA1-204ENST00000437025 ZKSCAN1P17029 563 aaPredicted RBP12.84□□□□□ -0.35
GABRA1-204ENST00000437025 AKAP4Q5JQC9 854 aa12.84□□□□□ -0.35
GABRA1-204ENST00000437025 BEND3Q5T5X7 828 aa12.84□□□□□ -0.35
GABRA1-204ENST00000437025 NDUFB9Q9Y6M9 179 aa12.84□□□□□ -0.35
GABRA1-204ENST00000437025 DNAJC2Q99543 621 aaKnown RBP12.84□□□□□ -0.35
GABRA1-204ENST00000437025 MYD88Q99836 296 aa12.84□□□□□ -0.35
GABRA1-204ENST00000437025 CNPY2Q9Y2B0 182 aa12.84□□□□□ -0.35
GABRA1-204ENST00000437025 WDR33Q9C0J8 1336 aaKnown RBP12.84□□□□□ -0.35
GABRA1-204ENST00000437025 ATP5J2-PTCD1G3V325 749 aa12.84□□□□□ -0.35
GABRA1-204ENST00000437025 RNMTO43148 476 aaKnown RBP12.84□□□□□ -0.35
GABRA1-204ENST00000437025 PTCD1O75127 700 aaKnown RBP12.84□□□□□ -0.35
GABRA1-204ENST00000437025 MBD3O95983 291 aa12.84□□□□□ -0.35
GABRA1-204ENST00000437025 TTC5Q8N0Z6 440 aa12.84□□□□□ -0.35
GABRA1-204ENST00000437025 ECHDC1Q9NTX5 307 aa12.83□□□□□ -0.35
GABRA1-204ENST00000437025 SNX14Q9Y5W7 946 aa12.83□□□□□ -0.35
GABRA1-204ENST00000437025 ZNF526Q8TF50 670 aaPredicted RBP12.83□□□□□ -0.36
GABRA1-204ENST00000437025 PDRG1Q9NUG6 133 aa12.83□□□□□ -0.36
GABRA1-204ENST00000437025 SGSM2O43147 1006 aa12.83□□□□□ -0.36
GABRA1-204ENST00000437025 USP48Q86UV5 1035 aa12.83□□□□□ -0.36
GABRA1-204ENST00000437025 EDC3Q96F86 508 aaKnown RBP12.83□□□□□ -0.36
GABRA1-204ENST00000437025 R3HCC1Q9Y3T6 440 aaKnown RBP12.83□□□□□ -0.36
GABRA1-204ENST00000437025 PPFIA3O75145 1194 aa12.83□□□□□ -0.36
GABRA1-204ENST00000437025 KRT28Q7Z3Y7 464 aa12.83□□□□□ -0.36
GABRA1-204ENST00000437025 C3P01024 1663 aa12.82□□□□□ -0.36
GABRA1-204ENST00000437025 PTH1RQ03431 593 aa12.82□□□□□ -0.36
GABRA1-204ENST00000437025 FAM227BQ96M60 508 aa12.82□□□□□ -0.36
GABRA1-204ENST00000437025 TSPY26PQ9H489 355 aa12.82□□□□□ -0.36
GABRA1-204ENST00000437025 BICC1Q9H694 974 aaKnown RBP12.82□□□□□ -0.36
GABRA1-204ENST00000437025 PEAK1Q9H792 1746 aa12.82□□□□□ -0.36
GABRA1-204ENST00000437025 ZSCAN30Q86W11 494 aa12.82□□□□□ -0.36
GABRA1-204ENST00000437025 CNKSR2Q8WXI2 1034 aa12.82□□□□□ -0.36
GABRA1-204ENST00000437025 BCCIPQ9P287 314 aaKnown RBP eCLIP12.82□□□□□ -0.36
GABRA1-204ENST00000437025 GOLGA6L4A6NEF3 574 aa12.82□□□□□ -0.36
GABRA1-204ENST00000437025 NFATC2IPQ8NCF5 419 aa12.82□□□□□ -0.36
GABRA1-204ENST00000437025 SUCLG2Q96I99 432 aa12.82□□□□□ -0.36
GABRA1-204ENST00000437025 STAP2Q9UGK3 403 aa12.82□□□□□ -0.36
GABRA1-204ENST00000437025 CYP46A1Q9Y6A2 500 aa12.82□□□□□ -0.36
GABRA1-204ENST00000437025 MON2Q7Z3U7 1717 aa12.81□□□□□ -0.36
GABRA1-204ENST00000437025 CYP2E1P05181 493 aaPredicted RBP12.81□□□□□ -0.36
GABRA1-204ENST00000437025 ANAPC15P60006 121 aa12.81□□□□□ -0.36
GABRA1-204ENST00000437025 KSR2Q6VAB6 950 aa12.81□□□□□ -0.36
GABRA1-204ENST00000437025 PI4K2BQ8TCG2 481 aa12.81□□□□□ -0.36
GABRA1-204ENST00000437025 XAGE3Q8WTP9 111 aa12.81□□□□□ -0.36
GABRA1-204ENST00000437025 LIMCH1Q9UPQ0 1083 aa12.81□□□□□ -0.36
GABRA1-204ENST00000437025 BRD1O95696 1058 aa12.81□□□□□ -0.36
GABRA1-204ENST00000437025 HSPA4P34932 840 aa12.81□□□□□ -0.36
GABRA1-204ENST00000437025 AMOTQ4VCS5 1084 aa12.81□□□□□ -0.36
GABRA1-204ENST00000437025 COPS6Q7L5N1 327 aa12.81□□□□□ -0.36
GABRA1-204ENST00000437025 NEUROD6Q96NK8 337 aa12.81□□□□□ -0.36
GABRA1-204ENST00000437025 GRM8O00222 908 aa12.81□□□□□ -0.36
GABRA1-204ENST00000437025 AXIN2Q9Y2T1 843 aa12.81□□□□□ -0.36
GABRA1-204ENST00000437025 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.81□□□□□ -0.36
GABRA1-204ENST00000437025 TLR7Q9NYK1 1049 aaKnown RBP12.8□□□□□ -0.36
GABRA1-204ENST00000437025 DIP2AQ14689 1571 aa12.8□□□□□ -0.36
GABRA1-204ENST00000437025 GIGYF1O75420 1035 aaPredicted RBP12.8□□□□□ -0.36
GABRA1-204ENST00000437025 ADCK5Q3MIX3 580 aa12.8□□□□□ -0.36
GABRA1-204ENST00000437025 FAM173BQ6P4H8 233 aa12.8□□□□□ -0.36
GABRA1-204ENST00000437025 LRSAM1Q6UWE0 723 aa12.8□□□□□ -0.36
GABRA1-204ENST00000437025 RAD50Q92878 1312 aa12.8□□□□□ -0.36
GABRA1-204ENST00000437025 GJB2P29033 226 aa12.8□□□□□ -0.36
GABRA1-204ENST00000437025 ZNF445P59923 1031 aa12.8□□□□□ -0.36
GABRA1-204ENST00000437025 UBE3BQ7Z3V4 1068 aa12.8□□□□□ -0.36
GABRA1-204ENST00000437025 SETD1AO15047 1707 aaKnown RBP12.8□□□□□ -0.36
GABRA1-204ENST00000437025 STX6O43752 255 aa12.79□□□□□ -0.36
GABRA1-204ENST00000437025 LARGE1O95461 756 aa12.79□□□□□ -0.36
GABRA1-204ENST00000437025 CCDC85AQ96PX6 553 aaPredicted RBP12.79□□□□□ -0.36
GABRA1-204ENST00000437025 HDAC5Q9UQL6 1122 aa12.79□□□□□ -0.36
GABRA1-204ENST00000437025 SSH2Q76I76 1423 aa12.79□□□□□ -0.36
GABRA1-204ENST00000437025 NMIQ13287 307 aaPredicted RBP12.79□□□□□ -0.36
GABRA1-204ENST00000437025 RBM8AQ9Y5S9 174 aaKnown RBP12.79□□□□□ -0.36
GABRA1-204ENST00000437025 TATP17735 454 aaPredicted RBP12.79□□□□□ -0.36
GABRA1-204ENST00000437025 SYT1P21579 422 aa12.79□□□□□ -0.36
GABRA1-204ENST00000437025 ERC1Q8IUD2 1116 aa12.79□□□□□ -0.36
GABRA1-204ENST00000437025 USP25Q9UHP3 1055 aa12.79□□□□□ -0.36
GABRA1-204ENST00000437025 SALL3Q9BXA9 1300 aa12.79□□□□□ -0.36
GABRA1-204ENST00000437025 PHF14O94880 888 aa12.78□□□□□ -0.36
GABRA1-204ENST00000437025 ZNF830Q96NB3 372 aaPredicted RBP12.78□□□□□ -0.36
GABRA1-204ENST00000437025 DNM1Q05193 864 aaKnown RBP12.78□□□□□ -0.36
GABRA1-204ENST00000437025 RUFY3Q7L099 469 aa12.78□□□□□ -0.36
GABRA1-204ENST00000437025 EAF2Q96CJ1 260 aaPredicted RBP12.78□□□□□ -0.36
GABRA1-204ENST00000437025 NRKQ7Z2Y5 1582 aa12.78□□□□□ -0.36
GABRA1-204ENST00000437025 HCLS1P14317 486 aaPredicted RBP12.78□□□□□ -0.36
GABRA1-204ENST00000437025 POLA2Q14181 598 aa12.78□□□□□ -0.36
GABRA1-204ENST00000437025 HYPKQ9NX55 129 aa12.78□□□□□ -0.36
GABRA1-204ENST00000437025 ATF3P18847 181 aa12.78□□□□□ -0.36
GABRA1-204ENST00000437025 CEBPZQ03701 1054 aaKnown RBP12.78□□□□□ -0.36
GABRA1-204ENST00000437025 LARP1BQ659C4 914 aaKnown RBP12.78□□□□□ -0.36
GABRA1-204ENST00000437025 GIMAP6Q6P9H5 292 aa12.78□□□□□ -0.36
GABRA1-204ENST00000437025 LRRC2Q9BYS8 371 aa12.78□□□□□ -0.36
GABRA1-204ENST00000437025 LSG1Q9H089 658 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms