RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 CCDC183Q5T5S1 534 aa18.43■□□□□ 0.54
PTPN13-204ENST00000436978 GOLGA6L7A0A1B0GV03 622 aa18.43■□□□□ 0.54
PTPN13-204ENST00000436978 DNMT1P26358 1616 aaKnown RBP18.43■□□□□ 0.54
PTPN13-204ENST00000436978 KIF2AO00139 706 aaPredicted RBP18.43■□□□□ 0.54
PTPN13-204ENST00000436978 HLA-DOAP06340 250 aa18.42■□□□□ 0.54
PTPN13-204ENST00000436978 ANO10Q9NW15 660 aa18.42■□□□□ 0.54
PTPN13-204ENST00000436978 EMILIN1Q9Y6C2 1016 aa18.42■□□□□ 0.54
PTPN13-204ENST00000436978 ZGPATQ8N5A5 531 aaKnown RBP18.42■□□□□ 0.54
PTPN13-204ENST00000436978 HMG20BQ9P0W2 317 aa18.42■□□□□ 0.54
PTPN13-204ENST00000436978 SNRPA1P09661 255 aaKnown RBP18.42■□□□□ 0.54
PTPN13-204ENST00000436978 FBXO31Q5XUX0 539 aaPredicted RBP18.42■□□□□ 0.54
PTPN13-204ENST00000436978 WDR62O43379 1518 aa18.42■□□□□ 0.54
PTPN13-204ENST00000436978 RFC4P35249 363 aa18.42■□□□□ 0.54
PTPN13-204ENST00000436978 CCDC152Q4G0S7 254 aa18.42■□□□□ 0.54
PTPN13-204ENST00000436978 SPA17Q15506 151 aa18.42■□□□□ 0.54
PTPN13-204ENST00000436978 SCLT1Q96NL6 688 aa18.42■□□□□ 0.54
PTPN13-204ENST00000436978 EZRP15311 586 aaKnown RBP18.42■□□□□ 0.54
PTPN13-204ENST00000436978 CCDC83Q8IWF9 413 aa18.41■□□□□ 0.54
PTPN13-204ENST00000436978 ANKRD24Q8TF21 1146 aa18.41■□□□□ 0.54
PTPN13-204ENST00000436978 TTLL12Q14166 644 aaPredicted RBP18.41■□□□□ 0.54
PTPN13-204ENST00000436978 ABCA5Q8WWZ7 1642 aa18.41■□□□□ 0.54
PTPN13-204ENST00000436978 MYO1BO43795 1136 aa18.41■□□□□ 0.54
PTPN13-204ENST00000436978 GOLGA8BA8MQT2 603 aa18.41■□□□□ 0.54
PTPN13-204ENST00000436978 CFAP100Q494V2 611 aa18.41■□□□□ 0.54
PTPN13-204ENST00000436978 BCL11BQ9C0K0 894 aaPredicted RBP18.41■□□□□ 0.54
PTPN13-204ENST00000436978 RIMS2Q9UQ26 1411 aa18.41■□□□□ 0.54
PTPN13-204ENST00000436978 ABCC10Q5T3U5 1492 aa18.4■□□□□ 0.54
PTPN13-204ENST00000436978 CCDC194A0A1B0GVG4 234 aa18.4■□□□□ 0.54
PTPN13-204ENST00000436978 SMARCA5O60264 1052 aaPredicted RBP18.4■□□□□ 0.54
PTPN13-204ENST00000436978 AMPD3Q01432 767 aa18.4■□□□□ 0.54
PTPN13-204ENST00000436978 ACEP12821 1306 aa18.4■□□□□ 0.54
PTPN13-204ENST00000436978 CCDC178Q5BJE1 867 aa18.4■□□□□ 0.54
PTPN13-204ENST00000436978 ARHGAP29Q52LW3 1261 aa18.4■□□□□ 0.54
PTPN13-204ENST00000436978 LIMCH1Q9UPQ0 1083 aa18.4■□□□□ 0.54
PTPN13-204ENST00000436978 IFIT3O14879 490 aaKnown RBP18.39■□□□□ 0.54
PTPN13-204ENST00000436978 SHANK2Q9UPX8 1470 aa18.39■□□□□ 0.54
PTPN13-204ENST00000436978 TRPM2O94759 1503 aa18.39■□□□□ 0.54
PTPN13-204ENST00000436978 MCM3P25205 808 aa18.39■□□□□ 0.53
PTPN13-204ENST00000436978 ZSCAN12O43309 604 aa18.39■□□□□ 0.53
PTPN13-204ENST00000436978 KIAA0754O94854 1291 aa18.39■□□□□ 0.53
PTPN13-204ENST00000436978 DISP3Q9P2K9 1392 aa18.39■□□□□ 0.53
PTPN13-204ENST00000436978 NPHP3Q7Z494 1330 aa18.39■□□□□ 0.53
PTPN13-204ENST00000436978 STXBP4Q6ZWJ1 553 aa18.38■□□□□ 0.53
PTPN13-204ENST00000436978 ZFYVE9O95405 1425 aa18.38■□□□□ 0.53
PTPN13-204ENST00000436978 NLRP5P59047 1200 aa18.38■□□□□ 0.53
PTPN13-204ENST00000436978 CALML4Q96GE6 196 aa18.38■□□□□ 0.53
PTPN13-204ENST00000436978 GOLGA8AA7E2F4 631 aa18.38■□□□□ 0.53
PTPN13-204ENST00000436978 UQCRFS1P1P0C7P4 283 aa18.38■□□□□ 0.53
PTPN13-204ENST00000436978 ANKRD62A6NC57 917 aa18.37■□□□□ 0.53
PTPN13-204ENST00000436978 SSR1P43307 286 aaKnown RBP18.37■□□□□ 0.53
PTPN13-204ENST00000436978 MCM4P33991 863 aa18.37■□□□□ 0.53
PTPN13-204ENST00000436978 MFSD6Q6ZSS7 791 aa18.37■□□□□ 0.53
PTPN13-204ENST00000436978 CETN1Q12798 172 aa18.37■□□□□ 0.53
PTPN13-204ENST00000436978 ECHDC1Q9NTX5 307 aa18.37■□□□□ 0.53
PTPN13-204ENST00000436978 CRNKL1Q9BZJ0 848 aaKnown RBP18.37■□□□□ 0.53
PTPN13-204ENST00000436978 C6orf229H3BNL8 230 aa18.37■□□□□ 0.53
PTPN13-204ENST00000436978 LRRC27Q9C0I9 530 aa18.37■□□□□ 0.53
PTPN13-204ENST00000436978 TSPYL1Q9H0U9 437 aa18.37■□□□□ 0.53
PTPN13-204ENST00000436978 KAT14Q9H8E8 782 aa18.37■□□□□ 0.53
PTPN13-204ENST00000436978 CACNA2D4Q7Z3S7 1137 aa18.36■□□□□ 0.53
PTPN13-204ENST00000436978 ATP10BO94823 1461 aa18.36■□□□□ 0.53
PTPN13-204ENST00000436978 CCDC8Q9H0W5 538 aaPredicted RBP18.36■□□□□ 0.53
PTPN13-204ENST00000436978 TRIM27P14373 513 aa18.36■□□□□ 0.53
PTPN13-204ENST00000436978 FAM177A1Q8N128 213 aaPredicted RBP18.36■□□□□ 0.53
PTPN13-204ENST00000436978 KANK3Q6NY19 840 aa18.36■□□□□ 0.53
PTPN13-204ENST00000436978 CABP5Q9NP86 173 aa18.36■□□□□ 0.53
PTPN13-204ENST00000436978 FAM114A1Q8IWE2 563 aa18.36■□□□□ 0.53
PTPN13-204ENST00000436978 FEZ1Q99689 392 aa18.36■□□□□ 0.53
PTPN13-204ENST00000436978 F6X3S4 739 aa18.35■□□□□ 0.53
PTPN13-204ENST00000436978 SFPQP23246 707 aaKnown RBP eCLIP18.35■□□□□ 0.53
PTPN13-204ENST00000436978 TCP11L1Q9NUJ3 509 aa18.35■□□□□ 0.53
PTPN13-204ENST00000436978 GPTP24298 496 aa18.35■□□□□ 0.53
PTPN13-204ENST00000436978 TRAF1Q13077 416 aa18.35■□□□□ 0.53
PTPN13-204ENST00000436978 TMEM67Q5HYA8 995 aa18.35■□□□□ 0.53
PTPN13-204ENST00000436978 LDHAL6AQ6ZMR3 332 aa18.35■□□□□ 0.53
PTPN13-204ENST00000436978 NBPF6Q5VWK0 638 aa18.35■□□□□ 0.53
PTPN13-204ENST00000436978 NBPF5PQ86XG9 351 aaPredicted RBP18.35■□□□□ 0.53
PTPN13-204ENST00000436978 SMARCC1Q92922 1105 aaPredicted RBP18.35■□□□□ 0.53
PTPN13-204ENST00000436978 NBPF4Q96M43 638 aa18.35■□□□□ 0.53
PTPN13-204ENST00000436978 GBP3Q9H0R5 595 aa18.35■□□□□ 0.53
PTPN13-204ENST00000436978 MAP9Q49MG5 647 aa18.34■□□□□ 0.53
PTPN13-204ENST00000436978 NYXQ9GZU5 481 aa18.34■□□□□ 0.53
PTPN13-204ENST00000436978 ARHGEF12Q9NZN5 1544 aa18.34■□□□□ 0.53
PTPN13-204ENST00000436978 NCOA7Q8NI08 942 aa18.34■□□□□ 0.53
PTPN13-204ENST00000436978 CENPHQ9H3R5 247 aa18.34■□□□□ 0.53
PTPN13-204ENST00000436978 KIF5CO60282 957 aa18.34■□□□□ 0.53
PTPN13-204ENST00000436978 CAMK4Q16566 473 aa18.34■□□□□ 0.53
PTPN13-204ENST00000436978 MBIPQ9NS73 344 aa18.34■□□□□ 0.53
PTPN13-204ENST00000436978 GOLIM4O00461 696 aa18.33■□□□□ 0.53
PTPN13-204ENST00000436978 VSIG10Q8N0Z9 540 aa18.33■□□□□ 0.53
PTPN13-204ENST00000436978 ZBTB3Q9H5J0 574 aa18.33■□□□□ 0.53
PTPN13-204ENST00000436978 SYCE3A1L190 88 aa18.33■□□□□ 0.53
PTPN13-204ENST00000436978 ZFYP08048 801 aaPredicted RBP18.33■□□□□ 0.53
PTPN13-204ENST00000436978 KRT23Q9C075 422 aa18.33■□□□□ 0.53
PTPN13-204ENST00000436978 CCDC91Q7Z6B0 441 aa18.33■□□□□ 0.53
PTPN13-204ENST00000436978 CNNM3Q8NE01 707 aa18.33■□□□□ 0.53
PTPN13-204ENST00000436978 GCC2Q8IWJ2 1684 aa18.33■□□□□ 0.52
PTPN13-204ENST00000436978 CASQ1P31415 396 aa18.33■□□□□ 0.52
PTPN13-204ENST00000436978 CEBPAP49715 358 aaPredicted RBP18.33■□□□□ 0.52
PTPN13-204ENST00000436978 UBE3BQ7Z3V4 1068 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms