RNA–Protein interactions for RNA: ENST00000436712.2

GAPVD1-209, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5

Gene GAPVD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-209ENST00000436712 GGNBP2Q9H3C7 697 aa9.46□□□□□ -0.89
GAPVD1-209ENST00000436712 LMTK3Q96Q04 1460 aa9.46□□□□□ -0.89
GAPVD1-209ENST00000436712 MMS22LQ6ZRQ5 1243 aa9.46□□□□□ -0.9
GAPVD1-209ENST00000436712 ANKRD36BQ8N2N9 1353 aa9.46□□□□□ -0.9
GAPVD1-209ENST00000436712 TSPY26PQ9H489 355 aa9.46□□□□□ -0.9
GAPVD1-209ENST00000436712 TMEM63CQ9P1W3 806 aa9.46□□□□□ -0.9
GAPVD1-209ENST00000436712 RBM27Q9P2N5 1060 aaKnown RBP9.46□□□□□ -0.9
GAPVD1-209ENST00000436712 CD163L1Q9NR16 1453 aa9.45□□□□□ -0.9
GAPVD1-209ENST00000436712 NAA30Q147X3 362 aaPredicted RBP9.45□□□□□ -0.9
GAPVD1-209ENST00000436712 IQUBQ8NA54 791 aa9.45□□□□□ -0.9
GAPVD1-209ENST00000436712 CCDC112Q8NEF3 446 aa9.45□□□□□ -0.9
GAPVD1-209ENST00000436712 PPM1EQ8WY54 764 aa9.45□□□□□ -0.9
GAPVD1-209ENST00000436712 CLUAP1Q96AJ1 413 aa9.45□□□□□ -0.9
GAPVD1-209ENST00000436712 RPS6KL1Q9Y6S9 549 aa9.45□□□□□ -0.9
GAPVD1-209ENST00000436712 NALCNQ8IZF0 1738 aa9.45□□□□□ -0.9
GAPVD1-209ENST00000436712 ATP7BP35670 1465 aa9.45□□□□□ -0.9
GAPVD1-209ENST00000436712 PTCH1Q13635 1447 aa9.45□□□□□ -0.9
GAPVD1-209ENST00000436712 BCAR3O75815 825 aa9.45□□□□□ -0.9
GAPVD1-209ENST00000436712 TPM4P67936 248 aa9.45□□□□□ -0.9
GAPVD1-209ENST00000436712 FBXO38Q6PIJ6 1188 aa9.45□□□□□ -0.9
GAPVD1-209ENST00000436712 TACO1Q9BSH4 297 aaKnown RBP9.45□□□□□ -0.9
GAPVD1-209ENST00000436712 NUCKS1Q9H1E3 243 aaKnown RBP9.45□□□□□ -0.9
GAPVD1-209ENST00000436712 PTPRCP08575 1304 aa9.44□□□□□ -0.9
GAPVD1-209ENST00000436712 K7ELQ4 463 aaPredicted RBP9.44□□□□□ -0.9
GAPVD1-209ENST00000436712 COQ9O75208 318 aa9.44□□□□□ -0.9
GAPVD1-209ENST00000436712 HDGFL2Q7Z4V5 671 aaPredicted RBP9.44□□□□□ -0.9
GAPVD1-209ENST00000436712 V9GYY5 206 aaPredicted RBP9.44□□□□□ -0.9
GAPVD1-209ENST00000436712 FBLN1P23142 703 aa9.44□□□□□ -0.9
GAPVD1-209ENST00000436712 IRX1P78414 480 aaPredicted RBP9.44□□□□□ -0.9
GAPVD1-209ENST00000436712 MORC1Q86VD1 984 aa9.44□□□□□ -0.9
GAPVD1-209ENST00000436712 ZRANB1Q9UGI0 708 aa9.44□□□□□ -0.9
GAPVD1-209ENST00000436712 CPP00450 1065 aa9.43□□□□□ -0.9
GAPVD1-209ENST00000436712 PYCARDQ9ULZ3 195 aa9.43□□□□□ -0.9
GAPVD1-209ENST00000436712 NKTRP30414 1462 aaKnown RBP9.43□□□□□ -0.9
GAPVD1-209ENST00000436712 HTATSF1O43719 755 aaKnown RBP9.43□□□□□ -0.9
GAPVD1-209ENST00000436712 ADCY5O95622 1261 aa9.43□□□□□ -0.9
GAPVD1-209ENST00000436712 MBD3O95983 291 aa9.43□□□□□ -0.9
GAPVD1-209ENST00000436712 CT47B1P0C2W7 299 aaPredicted RBP9.43□□□□□ -0.9
GAPVD1-209ENST00000436712 JAKMIP3Q5VZ66 844 aa9.43□□□□□ -0.9
GAPVD1-209ENST00000436712 PROSER2Q86WR7 435 aaPredicted RBP9.43□□□□□ -0.9
GAPVD1-209ENST00000436712 USP32Q8NFA0 1604 aa9.43□□□□□ -0.9
GAPVD1-209ENST00000436712 STRCP1A6NGW2 1772 aa9.42□□□□□ -0.9
GAPVD1-209ENST00000436712 CYP2E1P05181 493 aaPredicted RBP9.42□□□□□ -0.9
GAPVD1-209ENST00000436712 NEUROD2Q15784 382 aa9.42□□□□□ -0.9
GAPVD1-209ENST00000436712 RNF20Q5VTR2 975 aa9.42□□□□□ -0.9
GAPVD1-209ENST00000436712 NME9Q86XW9 330 aa9.42□□□□□ -0.9
GAPVD1-209ENST00000436712 PDZRN3Q9UPQ7 1066 aa9.42□□□□□ -0.9
GAPVD1-209ENST00000436712 CCDC61Q9Y6R9 512 aa9.42□□□□□ -0.9
GAPVD1-209ENST00000436712 ADGRB2O60241 1585 aa9.42□□□□□ -0.9
GAPVD1-209ENST00000436712 STRCQ7RTU9 1775 aa9.42□□□□□ -0.9
GAPVD1-209ENST00000436712 C21orf2O43822 256 aa9.42□□□□□ -0.9
GAPVD1-209ENST00000436712 PRPF40AO75400 957 aaKnown RBP9.42□□□□□ -0.9
GAPVD1-209ENST00000436712 PDE3AQ14432 1141 aa9.42□□□□□ -0.9
GAPVD1-209ENST00000436712 GTF3C6Q969F1 213 aa9.42□□□□□ -0.9
GAPVD1-209ENST00000436712 KIF2CQ99661 725 aa9.42□□□□□ -0.9
GAPVD1-209ENST00000436712 KCNF1Q9H3M0 494 aa9.42□□□□□ -0.9
GAPVD1-209ENST00000436712 USP25Q9UHP3 1055 aa9.42□□□□□ -0.9
GAPVD1-209ENST00000436712 RRP7AQ9Y3A4 280 aaKnown RBP9.42□□□□□ -0.9
GAPVD1-209ENST00000436712 FHOD1Q9Y613 1164 aa9.42□□□□□ -0.9
GAPVD1-209ENST00000436712 ITSN1Q15811 1721 aa9.42□□□□□ -0.9
GAPVD1-209ENST00000436712 ACEP12821 1306 aa9.41□□□□□ -0.9
GAPVD1-209ENST00000436712 ERCC3P19447 782 aa9.41□□□□□ -0.9
GAPVD1-209ENST00000436712 ILDR1Q86SU0 546 aaPredicted RBP9.41□□□□□ -0.9
GAPVD1-209ENST00000436712 ERCC4Q92889 916 aaPredicted RBP9.41□□□□□ -0.9
GAPVD1-209ENST00000436712 SMARCE1Q969G3 411 aa9.41□□□□□ -0.9
GAPVD1-209ENST00000436712 FAXDC2Q96IV6 333 aa9.41□□□□□ -0.9
GAPVD1-209ENST00000436712 FOXD4L1Q9NU39 408 aa9.41□□□□□ -0.9
GAPVD1-209ENST00000436712 PIK3R4Q99570 1358 aa9.41□□□□□ -0.9
GAPVD1-209ENST00000436712 SMC2O95347 1197 aa9.41□□□□□ -0.9
GAPVD1-209ENST00000436712 IVLP07476 585 aa9.41□□□□□ -0.9
GAPVD1-209ENST00000436712 TPM1P09493 284 aa9.41□□□□□ -0.9
GAPVD1-209ENST00000436712 PLA2G4AP47712 749 aa9.41□□□□□ -0.9
GAPVD1-209ENST00000436712 RBM5P52756 815 aaKnown RBP eCLIP9.41□□□□□ -0.9
GAPVD1-209ENST00000436712 C1QTNF12Q5T7M4 302 aa9.41□□□□□ -0.9
GAPVD1-209ENST00000436712 CWC22Q9HCG8 908 aaKnown RBP9.41□□□□□ -0.9
GAPVD1-209ENST00000436712 FYB1O15117 783 aa9.4□□□□□ -0.9
GAPVD1-209ENST00000436712 MTHFSP49914 203 aa9.4□□□□□ -0.9
GAPVD1-209ENST00000436712 NUTM2GQ5VZR2 741 aa9.4□□□□□ -0.9
GAPVD1-209ENST00000436712 NGDNQ8NEJ9 315 aaKnown RBP9.4□□□□□ -0.9
GAPVD1-209ENST00000436712 GAS2L2Q8NHY3 880 aa9.4□□□□□ -0.9
GAPVD1-209ENST00000436712 TEX13AQ9BXU3 409 aaPredicted RBP9.4□□□□□ -0.9
GAPVD1-209ENST00000436712 PSD3Q9NYI0 1048 aa9.4□□□□□ -0.9
GAPVD1-209ENST00000436712 KIF20BQ96Q89 1820 aa9.4□□□□□ -0.9
GAPVD1-209ENST00000436712 CDC42BPGQ6DT37 1551 aa9.4□□□□□ -0.9
GAPVD1-209ENST00000436712 ZNF335Q9H4Z2 1342 aaPredicted RBP9.4□□□□□ -0.9
GAPVD1-209ENST00000436712 EIF3CLB5ME19 914 aaKnown RBP9.4□□□□□ -0.91
GAPVD1-209ENST00000436712 SCP2P22307 547 aa9.4□□□□□ -0.91
GAPVD1-209ENST00000436712 CCT2P78371 535 aaKnown RBP9.4□□□□□ -0.91
GAPVD1-209ENST00000436712 ST5P78524 1137 aa9.4□□□□□ -0.91
GAPVD1-209ENST00000436712 TSHZ1Q6ZSZ6 1077 aa9.4□□□□□ -0.91
GAPVD1-209ENST00000436712 TATDN2Q93075 761 aa9.4□□□□□ -0.91
GAPVD1-209ENST00000436712 ERO1AQ96HE7 468 aa9.4□□□□□ -0.91
GAPVD1-209ENST00000436712 AK7Q96M32 723 aa9.4□□□□□ -0.91
GAPVD1-209ENST00000436712 EIF3CQ99613 913 aaKnown RBP9.4□□□□□ -0.91
GAPVD1-209ENST00000436712 ETAA1Q9NY74 926 aa9.4□□□□□ -0.91
GAPVD1-209ENST00000436712 POLR3AO14802 1390 aaPredicted RBP9.4□□□□□ -0.91
GAPVD1-209ENST00000436712 TOPAZ1Q8N9V7 1692 aa9.4□□□□□ -0.91
GAPVD1-209ENST00000436712 PNMA6AP0CW24 399 aaPredicted RBP9.39□□□□□ -0.91
GAPVD1-209ENST00000436712 H2AFXP16104 143 aaPredicted RBP9.39□□□□□ -0.91
GAPVD1-209ENST00000436712 TTC19Q6DKK2 380 aaPredicted RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms