RNA–Protein interactions for RNA: ENST00000434728.1

CDC42EP1-204, Transcript of CDC42 effector protein 1, humanhuman

TSL 4

Gene CDC42EP1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-204ENST00000434728 NBPF5PQ86XG9 351 aaPredicted RBP17.88■□□□□ 0.45
CDC42EP1-204ENST00000434728 PHACTR3Q96KR7 559 aa17.88■□□□□ 0.45
CDC42EP1-204ENST00000434728 BCORQ6W2J9 1755 aa17.88■□□□□ 0.45
CDC42EP1-204ENST00000434728 CEMIPQ8WUJ3 1361 aa17.88■□□□□ 0.45
CDC42EP1-204ENST00000434728 FER1L6Q2WGJ9 1857 aa17.88■□□□□ 0.45
CDC42EP1-204ENST00000434728 PIP4K2AP48426 406 aaPredicted RBP17.87■□□□□ 0.45
CDC42EP1-204ENST00000434728 STYK1Q6J9G0 422 aa17.87■□□□□ 0.45
CDC42EP1-204ENST00000434728 PRPF40BQ6NWY9 871 aaKnown RBP17.87■□□□□ 0.45
CDC42EP1-204ENST00000434728 RSPH6AQ9H0K4 717 aa17.87■□□□□ 0.45
CDC42EP1-204ENST00000434728 PCNTO95613 3336 aa17.87■□□□□ 0.45
CDC42EP1-204ENST00000434728 KCNQ3O43525 872 aa17.86■□□□□ 0.45
CDC42EP1-204ENST00000434728 MASTLQ96GX5 879 aa17.86■□□□□ 0.45
CDC42EP1-204ENST00000434728 NEFMP07197 916 aa17.85■□□□□ 0.45
CDC42EP1-204ENST00000434728 SNRPA1P09661 255 aaKnown RBP17.85■□□□□ 0.45
CDC42EP1-204ENST00000434728 MCM10Q7L590 875 aa17.85■□□□□ 0.45
CDC42EP1-204ENST00000434728 SLX4Q8IY92 1834 aa17.85■□□□□ 0.45
CDC42EP1-204ENST00000434728 USP16Q9Y5T5 823 aa17.85■□□□□ 0.45
CDC42EP1-204ENST00000434728 LTBP3Q9NS15 1303 aa17.84■□□□□ 0.45
CDC42EP1-204ENST00000434728 SRGNP10124 158 aa17.84■□□□□ 0.45
CDC42EP1-204ENST00000434728 COL13A1Q5TAT6 717 aaPredicted RBP17.84■□□□□ 0.45
CDC42EP1-204ENST00000434728 CAPN15O75808 1086 aa17.83■□□□□ 0.44
CDC42EP1-204ENST00000434728 GTF2E1P29083 439 aaPredicted RBP17.83■□□□□ 0.44
CDC42EP1-204ENST00000434728 CLEC4GQ6UXB4 293 aa17.83■□□□□ 0.44
CDC42EP1-204ENST00000434728 TNS4Q8IZW8 715 aa17.83■□□□□ 0.44
CDC42EP1-204ENST00000434728 ARFGEF2Q9Y6D5 1785 aa17.83■□□□□ 0.44
CDC42EP1-204ENST00000434728 FAM177BA6PVY3 158 aa17.82■□□□□ 0.44
CDC42EP1-204ENST00000434728 CCDC93Q567U6 631 aa17.82■□□□□ 0.44
CDC42EP1-204ENST00000434728 TPTE2Q6XPS3 522 aa17.82■□□□□ 0.44
CDC42EP1-204ENST00000434728 NIP7Q9Y221 180 aaKnown RBP eCLIP17.82■□□□□ 0.44
CDC42EP1-204ENST00000434728 PRAMEF22A3QJZ6 481 aa17.81■□□□□ 0.44
CDC42EP1-204ENST00000434728 IQCA1LA6NCM1 817 aa17.81■□□□□ 0.44
CDC42EP1-204ENST00000434728 DDNO94850 711 aaPredicted RBP17.81■□□□□ 0.44
CDC42EP1-204ENST00000434728 NPR1P16066 1061 aa17.81■□□□□ 0.44
CDC42EP1-204ENST00000434728 CHADLQ6NUI6 762 aa17.81■□□□□ 0.44
CDC42EP1-204ENST00000434728 POTECB2RU33 542 aa17.8■□□□□ 0.44
CDC42EP1-204ENST00000434728 HSPA1AP0DMV8 641 aaKnown RBP17.8■□□□□ 0.44
CDC42EP1-204ENST00000434728 HSPA1BP0DMV9 641 aaKnown RBP17.8■□□□□ 0.44
CDC42EP1-204ENST00000434728 DCTN1Q14203 1278 aa17.8■□□□□ 0.44
CDC42EP1-204ENST00000434728 PPP2R1AP30153 589 aa17.79■□□□□ 0.44
CDC42EP1-204ENST00000434728 HTATSF1O43719 755 aaKnown RBP17.78■□□□□ 0.44
CDC42EP1-204ENST00000434728 TAF7Q15545 349 aaPredicted RBP17.77■□□□□ 0.44
CDC42EP1-204ENST00000434728 NGEFQ8N5V2 710 aa17.77■□□□□ 0.44
CDC42EP1-204ENST00000434728 CREBZFQ9NS37 354 aa17.77■□□□□ 0.44
CDC42EP1-204ENST00000434728 MKRN1Q9UHC7 482 aaKnown RBP17.77■□□□□ 0.44
CDC42EP1-204ENST00000434728 FKBP4Q02790 459 aaKnown RBP eCLIP17.76■□□□□ 0.43
CDC42EP1-204ENST00000434728 EAPPQ56P03 285 aaPredicted RBP17.76■□□□□ 0.43
CDC42EP1-204ENST00000434728 RTKN2Q8IZC4 609 aa17.76■□□□□ 0.43
CDC42EP1-204ENST00000434728 ZNF277Q9NRM2 450 aaPredicted RBP17.76■□□□□ 0.43
CDC42EP1-204ENST00000434728 LAMB4A4D0S4 1761 aa17.76■□□□□ 0.43
CDC42EP1-204ENST00000434728 SCN4AP35499 1836 aa17.75■□□□□ 0.43
CDC42EP1-204ENST00000434728 NBPF26B4DH59 902 aa17.75■□□□□ 0.43
CDC42EP1-204ENST00000434728 POTEIP0CG38 1075 aa17.75■□□□□ 0.43
CDC42EP1-204ENST00000434728 POTEJP0CG39 1038 aa17.75■□□□□ 0.43
CDC42EP1-204ENST00000434728 ALDH1B1P30837 517 aa17.75■□□□□ 0.43
CDC42EP1-204ENST00000434728 NBPF10Q6P3W6 841 aaKnown RBP17.75■□□□□ 0.43
CDC42EP1-204ENST00000434728 LDHDQ86WU2 507 aa17.75■□□□□ 0.43
CDC42EP1-204ENST00000434728 NBPF15Q8N660 670 aa17.75■□□□□ 0.43
CDC42EP1-204ENST00000434728 MIS18AQ9NYP9 233 aa17.75■□□□□ 0.43
CDC42EP1-204ENST00000434728 CLEC11AQ9Y240 323 aa17.75■□□□□ 0.43
CDC42EP1-204ENST00000434728 RGL2O15211 777 aa17.74■□□□□ 0.43
CDC42EP1-204ENST00000434728 KIF6Q6ZMV9 814 aa17.74■□□□□ 0.43
CDC42EP1-204ENST00000434728 PNISRQ8TF01 805 aaKnown RBP17.74■□□□□ 0.43
CDC42EP1-204ENST00000434728 NYXQ9GZU5 481 aa17.74■□□□□ 0.43
CDC42EP1-204ENST00000434728 TAF1DQ9H5J8 278 aaPredicted RBP17.73■□□□□ 0.43
CDC42EP1-204ENST00000434728 HACL1Q9UJ83 578 aa17.73■□□□□ 0.43
CDC42EP1-204ENST00000434728 HLFQ16534 295 aa17.72■□□□□ 0.43
CDC42EP1-204ENST00000434728 C7orf43Q8WVR3 580 aa17.72■□□□□ 0.43
CDC42EP1-204ENST00000434728 JDP2Q8WYK2 163 aa17.72■□□□□ 0.43
CDC42EP1-204ENST00000434728 RPGRQ92834 1020 aaKnown RBP17.72■□□□□ 0.43
CDC42EP1-204ENST00000434728 L3MBTL3Q96JM7 780 aaPredicted RBP17.72■□□□□ 0.43
CDC42EP1-204ENST00000434728 RRP7AQ9Y3A4 280 aaKnown RBP17.72■□□□□ 0.43
CDC42EP1-204ENST00000434728 DLG5Q8TDM6 1919 aa17.72■□□□□ 0.43
CDC42EP1-204ENST00000434728 ZNF541Q9H0D2 1346 aa17.72■□□□□ 0.43
CDC42EP1-204ENST00000434728 KLRG2A4D1S0 409 aaPredicted RBP17.71■□□□□ 0.43
CDC42EP1-204ENST00000434728 MYL6BP14649 208 aa17.71■□□□□ 0.43
CDC42EP1-204ENST00000434728 IARSP41252 1262 aaKnown RBP17.71■□□□□ 0.43
CDC42EP1-204ENST00000434728 OLFM4Q6UX06 510 aa17.71■□□□□ 0.43
CDC42EP1-204ENST00000434728 MAPK8IP3Q9UPT6 1336 aa17.71■□□□□ 0.42
CDC42EP1-204ENST00000434728 NUTM1Q86Y26 1132 aa17.7■□□□□ 0.42
CDC42EP1-204ENST00000434728 SYNE4Q8N205 404 aa17.7■□□□□ 0.42
CDC42EP1-204ENST00000434728 AIDAQ96BJ3 306 aa17.7■□□□□ 0.42
CDC42EP1-204ENST00000434728 NUP98P52948 1817 aa17.7■□□□□ 0.42
CDC42EP1-204ENST00000434728 EPHX2P34913 555 aa17.69■□□□□ 0.42
CDC42EP1-204ENST00000434728 PNMA8AQ86V59 439 aaPredicted RBP17.69■□□□□ 0.42
CDC42EP1-204ENST00000434728 TMX4Q9H1E5 349 aaPredicted RBP17.69■□□□□ 0.42
CDC42EP1-204ENST00000434728 PNNQ9H307 717 aaKnown RBP17.69■□□□□ 0.42
CDC42EP1-204ENST00000434728 RNF123Q5XPI4 1314 aa17.69■□□□□ 0.42
CDC42EP1-204ENST00000434728 MAP3K15Q6ZN16 1313 aa17.69■□□□□ 0.42
CDC42EP1-204ENST00000434728 TMEM88BA6NKF7 163 aa17.68■□□□□ 0.42
CDC42EP1-204ENST00000434728 ERVV-1B6SEH8 477 aa17.68■□□□□ 0.42
CDC42EP1-204ENST00000434728 GPTP24298 496 aa17.68■□□□□ 0.42
CDC42EP1-204ENST00000434728 EIF6P56537 245 aaKnown RBP17.68■□□□□ 0.42
CDC42EP1-204ENST00000434728 ZBTB3Q9H5J0 574 aa17.68■□□□□ 0.42
CDC42EP1-204ENST00000434728 KDM3BQ7LBC6 1761 aa17.68■□□□□ 0.42
CDC42EP1-204ENST00000434728 CNTNAP1P78357 1384 aa17.67■□□□□ 0.42
CDC42EP1-204ENST00000434728 ABCC12Q96J65 1359 aa17.67■□□□□ 0.42
CDC42EP1-204ENST00000434728 LMOD1P29536 600 aaPredicted RBP17.67■□□□□ 0.42
CDC42EP1-204ENST00000434728 CC2D2BQ6DHV5 1058 aa17.67■□□□□ 0.42
CDC42EP1-204ENST00000434728 GJA3Q9Y6H8 435 aa17.67■□□□□ 0.42
CDC42EP1-204ENST00000434728 NFE2L2Q16236 605 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms