RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 RASEFQ8IZ41 740 aa18.84■□□□□ 0.61
SCARF1-203ENST00000434376 FSD1Q9BTV5 496 aa18.84■□□□□ 0.61
SCARF1-203ENST00000434376 GRM8O00222 908 aa18.84■□□□□ 0.61
SCARF1-203ENST00000434376 DDX58O95786 925 aaKnown RBP18.84■□□□□ 0.61
SCARF1-203ENST00000434376 A0A087WZG4 1122 aa18.84■□□□□ 0.61
SCARF1-203ENST00000434376 SSH3Q8TE77 659 aa18.84■□□□□ 0.61
SCARF1-203ENST00000434376 PIK3C2AO00443 1686 aa18.83■□□□□ 0.61
SCARF1-203ENST00000434376 CASTP20810 708 aaKnown RBP18.83■□□□□ 0.61
SCARF1-203ENST00000434376 IBTKQ9P2D0 1353 aaPredicted RBP18.83■□□□□ 0.61
SCARF1-203ENST00000434376 ARHGAP23Q9P227 1491 aa18.83■□□□□ 0.61
SCARF1-203ENST00000434376 COL9A3Q14050 684 aaPredicted RBP18.83■□□□□ 0.6
SCARF1-203ENST00000434376 CNTROBQ8N137 903 aa18.83■□□□□ 0.6
SCARF1-203ENST00000434376 NECAB1Q8N987 351 aa18.83■□□□□ 0.6
SCARF1-203ENST00000434376 ADCY9O60503 1353 aa18.83■□□□□ 0.6
SCARF1-203ENST00000434376 MSNP26038 577 aaKnown RBP18.82■□□□□ 0.6
SCARF1-203ENST00000434376 RRP9O43818 475 aaKnown RBP18.82■□□□□ 0.6
SCARF1-203ENST00000434376 EAF2Q96CJ1 260 aaPredicted RBP18.82■□□□□ 0.6
SCARF1-203ENST00000434376 PTH1RQ03431 593 aa18.82■□□□□ 0.6
SCARF1-203ENST00000434376 ANKRD13DQ6ZTN6 518 aa18.82■□□□□ 0.6
SCARF1-203ENST00000434376 ZNF594Q96JF6 807 aaPredicted RBP18.82■□□□□ 0.6
SCARF1-203ENST00000434376 JAKMIP1Q96N16 626 aaKnown RBP18.82■□□□□ 0.6
SCARF1-203ENST00000434376 AKAP12Q02952 1782 aa18.81■□□□□ 0.6
SCARF1-203ENST00000434376 KDM4AO75164 1064 aa18.81■□□□□ 0.6
SCARF1-203ENST00000434376 NASPP49321 788 aaPredicted RBP18.81■□□□□ 0.6
SCARF1-203ENST00000434376 FERMT3Q86UX7 667 aa18.81■□□□□ 0.6
SCARF1-203ENST00000434376 TTLL7Q6ZT98 887 aa18.81■□□□□ 0.6
SCARF1-203ENST00000434376 IFNL2Q8IZJ0 200 aa18.81■□□□□ 0.6
SCARF1-203ENST00000434376 LRRC2Q9BYS8 371 aa18.81■□□□□ 0.6
SCARF1-203ENST00000434376 IGKV5-2P06315 115 aa18.8■□□□□ 0.6
SCARF1-203ENST00000434376 FAM13BQ9NYF5 915 aa18.8■□□□□ 0.6
SCARF1-203ENST00000434376 NSFL1CQ9UNZ2 370 aaKnown RBP18.8■□□□□ 0.6
SCARF1-203ENST00000434376 NPHP3Q7Z494 1330 aa18.8■□□□□ 0.6
SCARF1-203ENST00000434376 PHKG2P15735 406 aa18.8■□□□□ 0.6
SCARF1-203ENST00000434376 GPTP24298 496 aa18.8■□□□□ 0.6
SCARF1-203ENST00000434376 CCDC129Q6ZRS4 1044 aa18.8■□□□□ 0.6
SCARF1-203ENST00000434376 NRKQ7Z2Y5 1582 aa18.8■□□□□ 0.6
SCARF1-203ENST00000434376 VPS37CA5D8V6 355 aaPredicted RBP18.8■□□□□ 0.6
SCARF1-203ENST00000434376 DDX46Q7L014 1031 aaKnown RBP18.8■□□□□ 0.6
SCARF1-203ENST00000434376 CCDC83Q8IWF9 413 aa18.8■□□□□ 0.6
SCARF1-203ENST00000434376 SLC52A2Q9HAB3 445 aa18.8■□□□□ 0.6
SCARF1-203ENST00000434376 SNRKQ9NRH2 765 aa18.8■□□□□ 0.6
SCARF1-203ENST00000434376 HSP90AB3PQ58FF7 597 aa18.79■□□□□ 0.6
SCARF1-203ENST00000434376 ADGRL3Q9HAR2 1447 aa18.79■□□□□ 0.6
SCARF1-203ENST00000434376 SLIT1O75093 1534 aa18.79■□□□□ 0.6
SCARF1-203ENST00000434376 ADCK5Q3MIX3 580 aa18.79■□□□□ 0.6
SCARF1-203ENST00000434376 FGD1P98174 961 aa18.78■□□□□ 0.6
SCARF1-203ENST00000434376 DDX21Q9NR30 783 aaKnown RBP eCLIP18.78■□□□□ 0.6
SCARF1-203ENST00000434376 PI4K2BQ8TCG2 481 aa18.78■□□□□ 0.6
SCARF1-203ENST00000434376 SEC62Q99442 399 aaKnown RBP18.78■□□□□ 0.6
SCARF1-203ENST00000434376 HYPKQ9NX55 129 aa18.78■□□□□ 0.6
SCARF1-203ENST00000434376 ZNF335Q9H4Z2 1342 aaPredicted RBP18.78■□□□□ 0.6
SCARF1-203ENST00000434376 FIBPO43427 364 aa18.77■□□□□ 0.6
SCARF1-203ENST00000434376 TIMM10P62072 90 aa18.77■□□□□ 0.6
SCARF1-203ENST00000434376 LMBR1LQ6UX01 489 aa18.77■□□□□ 0.6
SCARF1-203ENST00000434376 ANKARQ7Z5J8 1434 aa18.77■□□□□ 0.6
SCARF1-203ENST00000434376 ECHDC1Q9NTX5 307 aa18.77■□□□□ 0.6
SCARF1-203ENST00000434376 R3HCC1Q9Y3T6 440 aaKnown RBP18.77■□□□□ 0.6
SCARF1-203ENST00000434376 SASH1O94885 1247 aa18.77■□□□□ 0.59
SCARF1-203ENST00000434376 FAM173BQ6P4H8 233 aa18.77■□□□□ 0.59
SCARF1-203ENST00000434376 LINS1Q8NG48 757 aa18.77■□□□□ 0.59
SCARF1-203ENST00000434376 SYCE3A1L190 88 aa18.76■□□□□ 0.59
SCARF1-203ENST00000434376 TFCP2Q12800 502 aa18.76■□□□□ 0.59
SCARF1-203ENST00000434376 LARP1Q6PKG0 1096 aaKnown RBP18.76■□□□□ 0.59
SCARF1-203ENST00000434376 KAZALD1Q96I82 304 aa18.76■□□□□ 0.59
SCARF1-203ENST00000434376 TAF6LQ9Y6J9 622 aa18.76■□□□□ 0.59
SCARF1-203ENST00000434376 ADAMTS2O95450 1211 aa18.76■□□□□ 0.59
SCARF1-203ENST00000434376 SYNE4Q8N205 404 aa18.76■□□□□ 0.59
SCARF1-203ENST00000434376 CADPS2Q86UW7 1296 aa18.75■□□□□ 0.59
SCARF1-203ENST00000434376 GPATCH3Q96I76 525 aa18.75■□□□□ 0.59
SCARF1-203ENST00000434376 ZDHHC9Q9Y397 364 aa18.75■□□□□ 0.59
SCARF1-203ENST00000434376 AK2P54819 239 aa18.75■□□□□ 0.59
SCARF1-203ENST00000434376 NUCB2P80303 420 aa18.75■□□□□ 0.59
SCARF1-203ENST00000434376 NMIQ13287 307 aaPredicted RBP18.75■□□□□ 0.59
SCARF1-203ENST00000434376 LARGE1O95461 756 aa18.74■□□□□ 0.59
SCARF1-203ENST00000434376 KIF24Q5T7B8 1368 aa18.74■□□□□ 0.59
SCARF1-203ENST00000434376 CEMIPQ8WUJ3 1361 aa18.74■□□□□ 0.59
SCARF1-203ENST00000434376 GLRX3O76003 335 aaKnown RBP18.74■□□□□ 0.59
SCARF1-203ENST00000434376 SNRPA1P09661 255 aaKnown RBP18.74■□□□□ 0.59
SCARF1-203ENST00000434376 NEURL1BA8MQ27 555 aa18.74■□□□□ 0.59
SCARF1-203ENST00000434376 PDIA6Q15084 440 aa18.74■□□□□ 0.59
SCARF1-203ENST00000434376 FMNL2Q96PY5 1086 aa18.74■□□□□ 0.59
SCARF1-203ENST00000434376 RAB11FIP3O75154 756 aa18.73■□□□□ 0.59
SCARF1-203ENST00000434376 RAB11FIP4Q86YS3 637 aa18.73■□□□□ 0.59
SCARF1-203ENST00000434376 STK11IPQ8N1F8 1099 aa18.73■□□□□ 0.59
SCARF1-203ENST00000434376 DBNDD2Q9BQY9 259 aa18.73■□□□□ 0.59
SCARF1-203ENST00000434376 SNX14Q9Y5W7 946 aa18.73■□□□□ 0.59
SCARF1-203ENST00000434376 NUTM2BA6NNL0 878 aaPredicted RBP18.73■□□□□ 0.59
SCARF1-203ENST00000434376 NUTM2EB1AL46 878 aaPredicted RBP18.73■□□□□ 0.59
SCARF1-203ENST00000434376 GCKRQ14397 625 aa18.73■□□□□ 0.59
SCARF1-203ENST00000434376 NUTM2AQ8IVF1 878 aaPredicted RBP18.73■□□□□ 0.59
SCARF1-203ENST00000434376 OSBPL3Q9H4L5 887 aa18.72■□□□□ 0.59
SCARF1-203ENST00000434376 CIZ1Q9ULV3 898 aaPredicted RBP18.72■□□□□ 0.59
SCARF1-203ENST00000434376 A0A0D9SFI3 127 aa18.72■□□□□ 0.59
SCARF1-203ENST00000434376 SGSM2O43147 1006 aa18.72■□□□□ 0.59
SCARF1-203ENST00000434376 GORABQ5T7V8 394 aa18.72■□□□□ 0.59
SCARF1-203ENST00000434376 CHST3Q7LGC8 479 aa18.72■□□□□ 0.59
SCARF1-203ENST00000434376 HSP90AB4PQ58FF6 505 aa18.72■□□□□ 0.59
SCARF1-203ENST00000434376 GADD45BO75293 160 aaPredicted RBP18.71■□□□□ 0.59
SCARF1-203ENST00000434376 FKBP4Q02790 459 aaKnown RBP eCLIP18.71■□□□□ 0.59
SCARF1-203ENST00000434376 POLA2Q14181 598 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms