RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 WNT7AO00755 349 aa9.52□□□□□ -0.89
COL17A1-204ENST00000433822 DIAPH1O60610 1272 aaKnown RBP9.52□□□□□ -0.89
COL17A1-204ENST00000433822 BCAR3O75815 825 aa9.52□□□□□ -0.89
COL17A1-204ENST00000433822 CALD1Q05682 793 aaKnown RBP9.52□□□□□ -0.89
COL17A1-204ENST00000433822 SNIP1Q8TAD8 396 aaKnown RBP9.52□□□□□ -0.89
COL17A1-204ENST00000433822 STK26Q9P289 416 aa9.52□□□□□ -0.89
COL17A1-204ENST00000433822 ARHGAP23Q9P227 1491 aa9.52□□□□□ -0.89
COL17A1-204ENST00000433822 NRKQ7Z2Y5 1582 aa9.51□□□□□ -0.89
COL17A1-204ENST00000433822 NFX1Q12986 1120 aaKnown RBP9.51□□□□□ -0.89
COL17A1-204ENST00000433822 ALDH1L2Q3SY69 923 aa9.51□□□□□ -0.89
COL17A1-204ENST00000433822 NUTM2DQ5VT03 806 aaPredicted RBP9.51□□□□□ -0.89
COL17A1-204ENST00000433822 STK17AQ9UEE5 414 aa9.51□□□□□ -0.89
COL17A1-204ENST00000433822 ADAMTS13Q76LX8 1427 aa9.5□□□□□ -0.89
COL17A1-204ENST00000433822 MAP2P11137 1827 aaKnown RBP9.5□□□□□ -0.89
COL17A1-204ENST00000433822 WIPF1O43516 503 aa9.5□□□□□ -0.89
COL17A1-204ENST00000433822 INSM1Q01101 510 aaPredicted RBP9.5□□□□□ -0.89
COL17A1-204ENST00000433822 NLRP7Q8WX94 980 aa9.5□□□□□ -0.89
COL17A1-204ENST00000433822 GGNBP2Q9H3C7 697 aa9.5□□□□□ -0.89
COL17A1-204ENST00000433822 CABP1Q9NZU7 370 aa9.5□□□□□ -0.89
COL17A1-204ENST00000433822 USP35Q9P2H5 1018 aa9.5□□□□□ -0.89
COL17A1-204ENST00000433822 KIF16BQ96L93 1317 aa9.5□□□□□ -0.89
COL17A1-204ENST00000433822 METP08581 1390 aa9.5□□□□□ -0.89
COL17A1-204ENST00000433822 PTCH1Q13635 1447 aa9.49□□□□□ -0.89
COL17A1-204ENST00000433822 NALCNQ8IZF0 1738 aa9.49□□□□□ -0.89
COL17A1-204ENST00000433822 SMPD1P17405 629 aa9.49□□□□□ -0.89
COL17A1-204ENST00000433822 TNNT2P45379 298 aaPredicted RBP9.49□□□□□ -0.89
COL17A1-204ENST00000433822 Q3C1V9 767 aa9.49□□□□□ -0.89
COL17A1-204ENST00000433822 C8orf34Q49A92 452 aa9.49□□□□□ -0.89
COL17A1-204ENST00000433822 ZKSCAN2Q63HK3 967 aa9.49□□□□□ -0.89
COL17A1-204ENST00000433822 RNF19BQ6ZMZ0 732 aa9.49□□□□□ -0.89
COL17A1-204ENST00000433822 ANKLE2Q86XL3 938 aa9.49□□□□□ -0.89
COL17A1-204ENST00000433822 COL16A1Q07092 1604 aaPredicted RBP9.49□□□□□ -0.89
COL17A1-204ENST00000433822 GPR37O15354 613 aa9.48□□□□□ -0.89
COL17A1-204ENST00000433822 NEFMP07197 916 aa9.48□□□□□ -0.89
COL17A1-204ENST00000433822 CANXP27824 592 aaKnown RBP9.48□□□□□ -0.89
COL17A1-204ENST00000433822 LMOD3Q0VAK6 560 aa9.48□□□□□ -0.89
COL17A1-204ENST00000433822 SAFB2Q14151 953 aaKnown RBP eCLIP9.48□□□□□ -0.89
COL17A1-204ENST00000433822 MVPQ14764 893 aaKnown RBP9.48□□□□□ -0.89
COL17A1-204ENST00000433822 RSPH6AQ9H0K4 717 aa9.48□□□□□ -0.89
COL17A1-204ENST00000433822 CHMP4BQ9H444 224 aaKnown RBP9.48□□□□□ -0.89
COL17A1-204ENST00000433822 ATP13A2Q9NQ11 1180 aa9.48□□□□□ -0.89
COL17A1-204ENST00000433822 POLKQ9UBT6 870 aa9.48□□□□□ -0.89
COL17A1-204ENST00000433822 PLEKHG3A1L390 1219 aa9.47□□□□□ -0.89
COL17A1-204ENST00000433822 PPM1GO15355 546 aaPredicted RBP9.47□□□□□ -0.89
COL17A1-204ENST00000433822 IPO8O15397 1037 aaKnown RBP9.47□□□□□ -0.89
COL17A1-204ENST00000433822 TRIM32Q13049 653 aa9.47□□□□□ -0.89
COL17A1-204ENST00000433822 SENP2Q9HC62 589 aa9.47□□□□□ -0.89
COL17A1-204ENST00000433822 PIK3R4Q99570 1358 aa9.47□□□□□ -0.89
COL17A1-204ENST00000433822 USP54Q70EL1 1684 aa9.46□□□□□ -0.89
COL17A1-204ENST00000433822 MMP16P51512 607 aa9.46□□□□□ -0.9
COL17A1-204ENST00000433822 HDAC1Q13547 482 aaPredicted RBP9.46□□□□□ -0.9
COL17A1-204ENST00000433822 NFE2L2Q16236 605 aa9.46□□□□□ -0.9
COL17A1-204ENST00000433822 DZIP1LQ8IYY4 767 aaKnown RBP9.46□□□□□ -0.9
COL17A1-204ENST00000433822 ARHGAP45Q92619 1136 aa9.46□□□□□ -0.9
COL17A1-204ENST00000433822 PHOX2BQ99453 314 aa9.46□□□□□ -0.9
COL17A1-204ENST00000433822 RWDD1Q9H446 243 aaPredicted RBP9.46□□□□□ -0.9
COL17A1-204ENST00000433822 DDX19BQ9UMR2 479 aa9.46□□□□□ -0.9
COL17A1-204ENST00000433822 RRP7AQ9Y3A4 280 aaKnown RBP9.46□□□□□ -0.9
COL17A1-204ENST00000433822 USP31Q70CQ4 1352 aa9.46□□□□□ -0.9
COL17A1-204ENST00000433822 OVOS2A0A0J9YW53 1432 aa9.46□□□□□ -0.9
COL17A1-204ENST00000433822 OVOS2Q6IE36 1432 aa9.46□□□□□ -0.9
COL17A1-204ENST00000433822 EP400Q96L91 3159 aa9.45□□□□□ -0.9
COL17A1-204ENST00000433822 U2SURPO15042 1029 aaKnown RBP9.45□□□□□ -0.9
COL17A1-204ENST00000433822 IL13P35225 146 aa9.45□□□□□ -0.9
COL17A1-204ENST00000433822 HAP1P54257 671 aaPredicted RBP9.45□□□□□ -0.9
COL17A1-204ENST00000433822 NUDT16Q96DE0 195 aaKnown RBP9.45□□□□□ -0.9
COL17A1-204ENST00000433822 MRGPRX2Q96LB1 330 aa9.45□□□□□ -0.9
COL17A1-204ENST00000433822 REPIN1Q9BWE0 567 aaKnown RBP9.45□□□□□ -0.9
COL17A1-204ENST00000433822 COG6Q9Y2V7 657 aa9.45□□□□□ -0.9
COL17A1-204ENST00000433822 KIF24Q5T7B8 1368 aa9.45□□□□□ -0.9
COL17A1-204ENST00000433822 SSH2Q76I76 1423 aa9.45□□□□□ -0.9
COL17A1-204ENST00000433822 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.45□□□□□ -0.9
COL17A1-204ENST00000433822 IGHDP01880 384 aa9.44□□□□□ -0.9
COL17A1-204ENST00000433822 SNRPBP14678 240 aaKnown RBP9.44□□□□□ -0.9
COL17A1-204ENST00000433822 RIPK4P57078 832 aa9.44□□□□□ -0.9
COL17A1-204ENST00000433822 NEUROD2Q15784 382 aa9.44□□□□□ -0.9
COL17A1-204ENST00000433822 ATF7IPQ6VMQ6 1270 aa9.44□□□□□ -0.9
COL17A1-204ENST00000433822 WAPLQ7Z5K2 1190 aa9.44□□□□□ -0.9
COL17A1-204ENST00000433822 PANK1Q8TE04 598 aa9.44□□□□□ -0.9
COL17A1-204ENST00000433822 COG3Q96JB2 828 aa9.44□□□□□ -0.9
COL17A1-204ENST00000433822 TRIM47Q96LD4 638 aa9.44□□□□□ -0.9
COL17A1-204ENST00000433822 IFT57Q9NWB7 429 aa9.44□□□□□ -0.9
COL17A1-204ENST00000433822 TBX22Q9Y458 520 aa9.44□□□□□ -0.9
COL17A1-204ENST00000433822 TTC21AQ8NDW8 1320 aa9.44□□□□□ -0.9
COL17A1-204ENST00000433822 ANKARQ7Z5J8 1434 aa9.44□□□□□ -0.9
COL17A1-204ENST00000433822 RGPD1P0DJD0 1748 aa9.44□□□□□ -0.9
COL17A1-204ENST00000433822 XRN1Q8IZH2 1706 aaKnown RBP9.44□□□□□ -0.9
COL17A1-204ENST00000433822 RGS12O14924 1447 aa9.43□□□□□ -0.9
COL17A1-204ENST00000433822 USP6P35125 1406 aa9.43□□□□□ -0.9
COL17A1-204ENST00000433822 ROBO2Q9HCK4 1378 aa9.43□□□□□ -0.9
COL17A1-204ENST00000433822 J3QL48 77 aa9.43□□□□□ -0.9
COL17A1-204ENST00000433822 TERTO14746 1132 aaKnown RBP9.43□□□□□ -0.9
COL17A1-204ENST00000433822 ZNF853P0CG23 659 aa9.43□□□□□ -0.9
COL17A1-204ENST00000433822 RLBP1P12271 317 aa9.43□□□□□ -0.9
COL17A1-204ENST00000433822 GNAI1P63096 354 aa9.43□□□□□ -0.9
COL17A1-204ENST00000433822 TTC21BQ7Z4L5 1316 aa9.42□□□□□ -0.9
COL17A1-204ENST00000433822 TRIM27P14373 513 aa9.42□□□□□ -0.9
COL17A1-204ENST00000433822 PRKAR2BP31323 418 aa9.42□□□□□ -0.9
COL17A1-204ENST00000433822 EXOSC9Q06265 439 aaKnown RBP9.42□□□□□ -0.9
COL17A1-204ENST00000433822 FTSJ3Q8IY81 847 aaKnown RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms