RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 PTMAP06454 111 aaKnown RBP4.46□□□□□ -1.7
SHPRH-205ENST00000433355 PRIMPOLQ96LW4 560 aa4.46□□□□□ -1.7
SHPRH-205ENST00000433355 TMX4Q9H1E5 349 aaPredicted RBP4.46□□□□□ -1.7
SHPRH-205ENST00000433355 SLC12A5Q9H2X9 1139 aa4.46□□□□□ -1.7
SHPRH-205ENST00000433355 ECHDC1Q9NTX5 307 aa4.46□□□□□ -1.7
SHPRH-205ENST00000433355 MYH3P11055 1940 aa4.46□□□□□ -1.7
SHPRH-205ENST00000433355 AKAP4Q5JQC9 854 aa4.46□□□□□ -1.7
SHPRH-205ENST00000433355 CRBNQ96SW2 442 aa4.46□□□□□ -1.7
SHPRH-205ENST00000433355 MAGEF1Q9HAY2 307 aa4.46□□□□□ -1.7
SHPRH-205ENST00000433355 CNNM2Q9H8M5 875 aa4.46□□□□□ -1.7
SHPRH-205ENST00000433355 ARGLU1Q9NWB6 273 aaPredicted RBP4.46□□□□□ -1.7
SHPRH-205ENST00000433355 ZBTB22O15209 634 aa4.46□□□□□ -1.7
SHPRH-205ENST00000433355 MCTP2Q6DN12 878 aa4.46□□□□□ -1.7
SHPRH-205ENST00000433355 LMOD2Q6P5Q4 547 aa4.46□□□□□ -1.7
SHPRH-205ENST00000433355 CCDC12Q8WUD4 166 aaPredicted RBP4.46□□□□□ -1.7
SHPRH-205ENST00000433355 CDC5LQ99459 802 aaKnown RBP4.46□□□□□ -1.7
SHPRH-205ENST00000433355 STAP2Q9UGK3 403 aa4.46□□□□□ -1.7
SHPRH-205ENST00000433355 MMP14P50281 582 aa4.45□□□□□ -1.7
SHPRH-205ENST00000433355 CLUL1Q15846 466 aa4.45□□□□□ -1.7
SHPRH-205ENST00000433355 KANK3Q6NY19 840 aa4.45□□□□□ -1.7
SHPRH-205ENST00000433355 BRAPQ7Z569 592 aa4.45□□□□□ -1.7
SHPRH-205ENST00000433355 CBFA2T2O43439 604 aa4.45□□□□□ -1.7
SHPRH-205ENST00000433355 SPAG1Q07617 926 aa4.45□□□□□ -1.7
SHPRH-205ENST00000433355 TRIM22Q8IYM9 498 aa4.45□□□□□ -1.7
SHPRH-205ENST00000433355 KCTD17Q8N5Z5 321 aa4.45□□□□□ -1.7
SHPRH-205ENST00000433355 TSPYL1Q9H0U9 437 aa4.45□□□□□ -1.7
SHPRH-205ENST00000433355 POTEB2H3BUK9 544 aa4.45□□□□□ -1.7
SHPRH-205ENST00000433355 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.45□□□□□ -1.7
SHPRH-205ENST00000433355 CCDC47Q96A33 483 aaKnown RBP4.45□□□□□ -1.7
SHPRH-205ENST00000433355 LRP6O75581 1613 aa4.45□□□□□ -1.7
SHPRH-205ENST00000433355 ZGPATQ8N5A5 531 aaKnown RBP4.45□□□□□ -1.7
SHPRH-205ENST00000433355 DNAAF4Q8WXU2 420 aa4.45□□□□□ -1.7
SHPRH-205ENST00000433355 MRC1P22897 1456 aa4.45□□□□□ -1.7
SHPRH-205ENST00000433355 KINO60870 393 aaKnown RBP4.45□□□□□ -1.7
SHPRH-205ENST00000433355 ZNF530Q6P9A1 599 aaPredicted RBP4.45□□□□□ -1.7
SHPRH-205ENST00000433355 ZSCAN30Q86W11 494 aa4.45□□□□□ -1.7
SHPRH-205ENST00000433355 IP6K1Q92551 441 aa4.45□□□□□ -1.7
SHPRH-205ENST00000433355 COG6Q9Y2V7 657 aa4.45□□□□□ -1.7
SHPRH-205ENST00000433355 FMNL2Q96PY5 1086 aa4.45□□□□□ -1.7
SHPRH-205ENST00000433355 PDZRN3Q9UPQ7 1066 aa4.45□□□□□ -1.7
SHPRH-205ENST00000433355 RALYLQ86SE5 291 aaKnown RBP4.45□□□□□ -1.7
SHPRH-205ENST00000433355 GRIPAP1Q4V328 841 aa4.45□□□□□ -1.7
SHPRH-205ENST00000433355 SYNE3Q6ZMZ3 975 aa4.45□□□□□ -1.7
SHPRH-205ENST00000433355 DAAM1Q9Y4D1 1078 aa4.45□□□□□ -1.7
SHPRH-205ENST00000433355 ERVV-2B6SEH9 535 aa4.45□□□□□ -1.7
SHPRH-205ENST00000433355 RRP9O43818 475 aaKnown RBP4.45□□□□□ -1.7
SHPRH-205ENST00000433355 MYL1P05976 194 aa4.45□□□□□ -1.7
SHPRH-205ENST00000433355 PLCG2P16885 1265 aa4.45□□□□□ -1.7
SHPRH-205ENST00000433355 ADAMTSL3P82987 1691 aa4.44□□□□□ -1.7
SHPRH-205ENST00000433355 STARD3NLO95772 234 aa4.44□□□□□ -1.7
SHPRH-205ENST00000433355 SLC26A4O43511 780 aa4.44□□□□□ -1.7
SHPRH-205ENST00000433355 USP42Q9H9J4 1324 aaKnown RBP4.44□□□□□ -1.7
SHPRH-205ENST00000433355 IL15P40933 162 aaPredicted RBP4.44□□□□□ -1.7
SHPRH-205ENST00000433355 PARP10Q53GL7 1025 aa4.44□□□□□ -1.7
SHPRH-205ENST00000433355 CEMIPQ8WUJ3 1361 aa4.44□□□□□ -1.7
SHPRH-205ENST00000433355 MAP3K19Q56UN5 1328 aa4.44□□□□□ -1.7
SHPRH-205ENST00000433355 SCP2P22307 547 aa4.44□□□□□ -1.7
SHPRH-205ENST00000433355 TMEM87AQ8NBN3 555 aa4.44□□□□□ -1.7
SHPRH-205ENST00000433355 POLKQ9UBT6 870 aa4.44□□□□□ -1.7
SHPRH-205ENST00000433355 CEP131Q9UPN4 1083 aa4.44□□□□□ -1.7
SHPRH-205ENST00000433355 LRRC27Q9C0I9 530 aa4.44□□□□□ -1.7
SHPRH-205ENST00000433355 PDS5AQ29RF7 1337 aaKnown RBP4.44□□□□□ -1.7
SHPRH-205ENST00000433355 CPLX1O14810 134 aa4.44□□□□□ -1.7
SHPRH-205ENST00000433355 RDXP35241 583 aaKnown RBP4.44□□□□□ -1.7
SHPRH-205ENST00000433355 KCNJ6P48051 423 aa4.44□□□□□ -1.7
SHPRH-205ENST00000433355 GNL2Q13823 731 aaKnown RBP4.44□□□□□ -1.7
SHPRH-205ENST00000433355 LIMCH1Q9UPQ0 1083 aa4.44□□□□□ -1.7
SHPRH-205ENST00000433355 MYH7P12883 1935 aa4.44□□□□□ -1.7
SHPRH-205ENST00000433355 NASPP49321 788 aaPredicted RBP4.44□□□□□ -1.7
SHPRH-205ENST00000433355 ABTB2Q8N961 1025 aa4.44□□□□□ -1.7
SHPRH-205ENST00000433355 SCN11AQ9UI33 1791 aa4.44□□□□□ -1.7
SHPRH-205ENST00000433355 IL13P35225 146 aa4.44□□□□□ -1.7
SHPRH-205ENST00000433355 CYB5RLQ6IPT4 315 aa4.44□□□□□ -1.7
SHPRH-205ENST00000433355 NAP1L4Q99733 375 aaKnown RBP4.44□□□□□ -1.7
SHPRH-205ENST00000433355 SEMA3EO15041 775 aa4.43□□□□□ -1.7
SHPRH-205ENST00000433355 JAKMIP3Q5VZ66 844 aa4.43□□□□□ -1.7
SHPRH-205ENST00000433355 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.43□□□□□ -1.7
SHPRH-205ENST00000433355 LZTS2Q9BRK4 669 aa4.43□□□□□ -1.7
SHPRH-205ENST00000433355 PXDNQ92626 1479 aa4.43□□□□□ -1.7
SHPRH-205ENST00000433355 CD163L1Q9NR16 1453 aa4.43□□□□□ -1.7
SHPRH-205ENST00000433355 GOLIM4O00461 696 aa4.43□□□□□ -1.7
SHPRH-205ENST00000433355 SNRPA1P09661 255 aaKnown RBP4.43□□□□□ -1.7
SHPRH-205ENST00000433355 IFNL2Q8IZJ0 200 aa4.43□□□□□ -1.7
SHPRH-205ENST00000433355 TXLNAP40222 546 aa4.43□□□□□ -1.7
SHPRH-205ENST00000433355 KSR2Q6VAB6 950 aa4.43□□□□□ -1.7
SHPRH-205ENST00000433355 HIRIP3Q9BW71 556 aaPredicted RBP4.43□□□□□ -1.7
SHPRH-205ENST00000433355 VPS53Q5VIR6 699 aa4.43□□□□□ -1.7
SHPRH-205ENST00000433355 MBIPQ9NS73 344 aa4.43□□□□□ -1.7
SHPRH-205ENST00000433355 NAA16Q6N069 864 aaPredicted RBP4.43□□□□□ -1.7
SHPRH-205ENST00000433355 CABP2Q9NPB3 220 aa4.43□□□□□ -1.7
SHPRH-205ENST00000433355 MYO6Q9UM54 1294 aa4.43□□□□□ -1.7
SHPRH-205ENST00000433355 KDM3BQ7LBC6 1761 aa4.43□□□□□ -1.7
SHPRH-205ENST00000433355 UBE2HP62256 183 aa4.43□□□□□ -1.7
SHPRH-205ENST00000433355 EXOSC9Q06265 439 aaKnown RBP4.43□□□□□ -1.7
SHPRH-205ENST00000433355 TRIM29Q14134 588 aa4.43□□□□□ -1.7
SHPRH-205ENST00000433355 UQCRFS1P1P0C7P4 283 aa4.43□□□□□ -1.7
SHPRH-205ENST00000433355 NEUROD2Q15784 382 aa4.43□□□□□ -1.7
SHPRH-205ENST00000433355 SPTY2D1Q68D10 685 aaPredicted RBP4.43□□□□□ -1.7
SHPRH-205ENST00000433355 SSH3Q8TE77 659 aa4.43□□□□□ -1.7
SHPRH-205ENST00000433355 DDX49Q9Y6V7 483 aaKnown RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 151.3 ms